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Project measure / variable:   Schoenrock1   OF_dist_VDD

ID, description, units MPD:61221   OF_dist_VDD   total distance traveled, 10 min test   [cm]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - total distance traveled, 10 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means2490   cm
Median of the strain means2423   cm
SD of the strain means± 1181
Coefficient of variation (CV)0.474
Min–max range of strain means575   –   5384   cm
Mean sample size per strain11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 298992066.6332 19932804.4422 43.1633 < 0.0001
Residuals 164 75735238.1702 461800.2327


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 2315.0 701.0   20 157.0 0.303 929.0, 3439.0 -0.15
RIX:CC(003 x 014) f 3141.0 742.0   9 247.0 0.236 1466.0, 4092.0 0.55
RIX:CC(004 x 017) f 5384.0 870.0   14 232.0 0.162 3765.0, 6520.0 2.45
RIX:CC(006 x 026) f 2886.0 317.0   9 106.0 0.11 2355.0, 3253.0 0.34
RIX:CC(011 x 001) f 2404.0 810.0   11 244.0 0.337 1466.0, 4092.0 -0.07
RIX:CC(014 x 003) f 2442.0 429.0   6 175.0 0.176 1914.0, 2991.0 -0.04
RIX:CC(017 x 004) f 4232.0 1294.0   13 359.0 0.306 2190.0, 6737.0 1.47
RIX:CC(023 x 047) f 1860.0 392.0   8 139.0 0.211 1217.0, 2647.0 -0.53
RIX:CC(026 x 006) f 2578.0 591.0   14 158.0 0.229 1876.0, 4056.0 0.07
RIX:CC(032 x 042) f 1985.0 450.0   19 103.0 0.227 883.0, 2648.0 -0.43
RIX:CC(035 x 062) f 2496.0 888.0   5 397.0 0.356 1549.0, 3950.0 0.0
RIX:CC(041 x 051) f 593.0 448.0   20 100.0 0.756 43.4, 1514.0 -1.61
RIX:CC(042 x 032) f 1796.0 675.0   6 275.0 0.376 734.0, 2761.0 -0.59
RIX:CC(047 x 023) f 2089.0 371.0   6 151.0 0.177 1613.0, 2616.0 -0.34
RIX:CC(051 x 041) f 575.0 345.0   14 92.3 0.6 52.0, 1026.0 -1.62
RIX:CC(062 x 035) f 3068.0 780.0   6 318.0 0.254 2053.0, 4396.0 0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 2314.535 151.954 2614.5734 2014.4966
RIX:CC(003 x 014) f 3140.7511 226.5196 3588.0219 2693.4803
RIX:CC(004 x 017) f 5384.2743 181.6197 5742.8887 5025.6598
RIX:CC(006 x 026) f 2886.2233 226.5196 3333.4941 2438.9525
RIX:CC(011 x 001) f 2404.3227 204.8947 2808.8944 1999.7511
RIX:CC(014 x 003) f 2441.555 277.4287 2989.3476 1893.7624
RIX:CC(017 x 004) f 4232.1277 188.4757 4604.2795 3859.9759
RIX:CC(023 x 047) f 1859.575 240.2603 2333.9773 1385.1727
RIX:CC(026 x 006) f 2577.9793 181.6197 2936.5937 2219.3648
RIX:CC(032 x 042) f 1984.6526 155.9015 2292.4855 1676.8197
RIX:CC(035 x 062) f 2496.156 303.908 3096.2328 1896.0792
RIX:CC(041 x 051) f 592.631 151.954 892.6694 292.5926
RIX:CC(042 x 032) f 1795.5433 277.4287 2343.336 1247.7507
RIX:CC(047 x 023) f 2089.385 277.4287 2637.1776 1541.5924
RIX:CC(051 x 041) f 575.3671 181.6197 933.9816 216.7527
RIX:CC(062 x 035) f 3067.9567 277.4287 3615.7493 2520.164




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA