Project measure / variable:   Tordoff1   NH4Cl_pref10

ID, description, units MPD:6122   NH4Cl_pref10   preference for NH4Cl (ammonium chloride) solutions   [%]  concentration 10 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for NH4Cl (ammonium chloride) solutions concentration 10 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means7.12   %
Median of the strain means6.61   %
SD of the strain means± 1.60
Coefficient of variation (CV)0.225
Min–max range of strain means5.24   –   10.9   %
Mean sample size per strain11.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 795.6375 29.4681 16.7904 < 0.0001
Residuals 291 510.7212 1.7551


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 5.58 0.72   12 0.208 0.129 5.0, 7.3 -0.96
A/J m 6.46 0.734   12 0.212 0.114 5.3, 7.9 -0.41
AKR/J m 5.71 0.55   12 0.159 0.0964 5.1, 6.8 -0.88
BALB/cByJ m 5.66 0.64   12 0.185 0.113 4.6, 6.6 -0.91
BUB/BnJ m 6.39 0.857   7 0.324 0.134 5.4, 7.9 -0.45
C3H/HeJ m 6.98 0.601   12 0.174 0.0861 6.2, 8.2 -0.08
C57BL/6J m 6.45 0.78   11 0.235 0.121 5.5, 8.0 -0.42
C57L/J m 7.43 0.948   11 0.286 0.128 5.6, 8.9 0.2
CAST/EiJ m 10.5 1.97   12 0.569 0.188 8.3, 15.7 2.11
CBA/J m 7.12 1.2   12 0.348 0.169 5.0, 9.3 0.0
CE/J m 6.6 0.842   12 0.243 0.128 5.1, 8.4 -0.32
DBA/2J m 7.87 0.986   12 0.285 0.125 6.6, 10.0 0.47
FVB/NJ m 5.24 0.751   12 0.217 0.143 4.4, 6.3 -1.17
I/LnJ m 7.92 1.38   11 0.416 0.174 6.2, 10.2 0.5
KK/HlJ m 5.87 1.99   6 0.811 0.338 3.6, 8.9 -0.78
LP/J m 6.95 1.19   12 0.344 0.172 5.5, 10.2 -0.1
NOD/ShiLtJ m 9.28 4.09   12 1.18 0.441 6.6, 21.2 1.35
NZB/BlNJ m 6.0 0.724   11 0.218 0.121 4.9, 7.2 -0.7
P/J m 6.62 1.01   12 0.291 0.152 5.5, 8.9 -0.31
PL/J m 6.44 0.669   12 0.193 0.104 5.4, 7.3 -0.42
RBF/DnJ m 7.02 1.07   12 0.308 0.152 4.8, 8.8 -0.06
RF/J m 5.65 0.576   12 0.166 0.102 5.0, 7.0 -0.91
RIIIS/J m 5.75 0.743   12 0.214 0.129 3.9, 6.7 -0.85
SEA/GnJ m 8.22 1.06   12 0.307 0.129 6.7, 10.0 0.69
SJL/J m 5.69 0.519   11 0.156 0.0911 4.9, 6.7 -0.89
SM/J m 10.9 2.0   11 0.604 0.185 6.1, 13.0 2.36
SPRET/EiJ m 8.03 0.654   12 0.189 0.0815 6.9, 8.8 0.57
SWR/J m 10.9 1.96   12 0.566 0.18 8.1, 15.5 2.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 5.5833 0.3824 6.336 4.8306
A/J m 6.4583 0.3824 7.211 5.7056
AKR/J m 5.7083 0.3824 6.461 4.9556
BALB/cByJ m 5.6583 0.3824 6.411 4.9056
BUB/BnJ m 6.3857 0.5007 7.3712 5.4002
C3H/HeJ m 6.9833 0.3824 7.736 6.2306
C57BL/6J m 6.4545 0.3994 7.2407 5.6684
C57L/J m 7.4273 0.3994 8.2134 6.6411
CAST/EiJ m 10.475 0.3824 11.2277 9.7223
CBA/J m 7.1167 0.3824 7.8694 6.364
CE/J m 6.6 0.3824 7.3527 5.8473
DBA/2J m 7.875 0.3824 8.6277 7.1223
FVB/NJ m 5.2417 0.3824 5.9944 4.489
I/LnJ m 7.9182 0.3994 8.7043 7.132
KK/HlJ m 5.8667 0.5408 6.9311 4.8022
LP/J m 6.95 0.3824 7.7027 6.1973
NOD/ShiLtJ m 9.275 0.3824 10.0277 8.5223
NZB/BlNJ m 6.0 0.3994 6.7862 5.2138
P/J m 6.6167 0.3824 7.3694 5.864
PL/J m 6.4417 0.3824 7.1944 5.689
RBF/DnJ m 7.025 0.3824 7.7777 6.2723
RF/J m 5.65 0.3824 6.4027 4.8973
RIIIS/J m 5.75 0.3824 6.5027 4.9973
SEA/GnJ m 8.225 0.3824 8.9777 7.4723
SJL/J m 5.6909 0.3994 6.4771 4.9048
SM/J m 10.8545 0.3994 11.6407 10.0684
SPRET/EiJ m 8.025 0.3824 8.7777 7.2723
SWR/J m 10.9 0.3824 11.6527 10.1473




  GWAS USING LINEAR MIXED MODELS