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Project measure / variable:   Tordoff1   KCl_pref10

ID, description, units MPD:6109   KCl_pref10   preference for KCl (potassium chloride) solutions   [%]  concentration 10 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for KCl (potassium chloride) solutions concentration 10 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means48.6   %
Median of the strain means49.2   %
SD of the strain means± 6.12
Coefficient of variation (CV)0.126
Min–max range of strain means26.7   –   57.6   %
Mean sample size per strain11.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 11997.2082 444.341 2.0388 0.0023
Residuals 293 63858.4985 217.9471


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 52.3 10.1   12 2.92 0.194 35.0, 66.7 0.61
A/J m 44.3 10.7   12 3.1 0.242 27.9, 54.2 -0.7
AKR/J m 43.1 10.6   12 3.07 0.247 20.8, 59.3 -0.9
BALB/cByJ m 53.5 11.6   12 3.36 0.218 40.3, 81.3 0.8
BUB/BnJ m 46.1 11.6   7 4.39 0.252 26.2, 57.6 -0.41
C3H/HeJ m 38.2 11.4   12 3.28 0.298 21.4, 60.8 -1.7
C57BL/6J m 50.2 11.0   12 3.18 0.219 24.5, 71.4 0.26
C57L/J m 42.9 8.52   11 2.57 0.199 26.8, 55.0 -0.93
CAST/EiJ m 53.6 15.4   12 4.45 0.288 20.0, 76.9 0.82
CBA/J m 53.5 22.1   12 6.39 0.414 12.7, 96.7 0.8
CE/J m 54.4 28.4   12 8.2 0.523 3.8, 98.6 0.95
DBA/2J m 47.6 12.9   12 3.73 0.271 36.5, 83.6 -0.16
FVB/NJ m 46.0 8.05   12 2.32 0.175 26.8, 55.6 -0.42
I/LnJ m 49.3 12.3   11 3.72 0.25 32.8, 74.4 0.11
KK/HlJ m 46.7 12.9   6 5.29 0.277 33.8, 65.2 -0.31
LP/J m 50.5 18.0   12 5.19 0.356 12.5, 78.4 0.31
NOD/ShiLtJ m 48.5 10.8   12 3.13 0.223 29.2, 69.8 -0.02
NZB/BlNJ m 47.5 10.5   12 3.02 0.221 33.3, 68.1 -0.18
P/J m 54.0 13.2   12 3.82 0.245 29.7, 72.7 0.88
PL/J m 49.2 8.51   12 2.46 0.173 36.6, 62.3 0.1
RBF/DnJ m 51.9 5.97   11 1.8 0.115 42.9, 65.1 0.54
RF/J m 48.4 12.7   12 3.68 0.263 20.0, 69.9 -0.03
RIIIS/J m 57.6 18.1   12 5.22 0.314 36.7, 97.0 1.47
SEA/GnJ m 50.2 11.9   12 3.42 0.236 25.3, 72.0 0.26
SJL/J m 56.9 15.2   11 4.58 0.267 25.4, 86.7 1.36
SM/J m 26.7 21.1   12 6.09 0.792 1.4, 54.0 -3.58
SPRET/EiJ m 47.6 27.5   12 7.95 0.578 3.9, 81.1 -0.16
SWR/J m 50.0 9.63   12 2.78 0.193 37.7, 69.0 0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 52.3167 4.2617 60.7041 43.9292
A/J m 44.2667 4.2617 52.6541 35.8792
AKR/J m 43.1167 4.2617 51.5041 34.7292
BALB/cByJ m 53.4667 4.2617 61.8541 45.0792
BUB/BnJ m 46.1 5.5799 57.0818 35.1182
C3H/HeJ m 38.1667 4.2617 46.5541 29.7792
C57BL/6J m 50.15 4.2617 58.5375 41.7625
C57L/J m 42.8727 4.4512 51.6331 34.1123
CAST/EiJ m 53.5833 4.2617 61.9708 45.1959
CBA/J m 53.45 4.2617 61.8375 45.0625
CE/J m 54.3667 4.2617 62.7541 45.9792
DBA/2J m 47.5917 4.2617 55.9791 39.2042
FVB/NJ m 46.025 4.2617 54.4125 37.6375
I/LnJ m 49.3091 4.4512 58.0695 40.5487
KK/HlJ m 46.6833 6.027 58.545 34.8217
LP/J m 50.5 4.2617 58.8875 42.1125
NOD/ShiLtJ m 48.4917 4.2617 56.8791 40.1042
NZB/BlNJ m 47.4667 4.2617 55.8541 39.0792
P/J m 54.0333 4.2617 62.4208 45.6459
PL/J m 49.1917 4.2617 57.5791 40.8042
RBF/DnJ m 51.9273 4.4512 60.6877 43.1669
RF/J m 48.425 4.2617 56.8125 40.0375
RIIIS/J m 57.6333 4.2617 66.0208 49.2459
SEA/GnJ m 50.1833 4.2617 58.5708 41.7959
SJL/J m 56.9091 4.4512 65.6695 48.1487
SM/J m 26.65 4.2617 35.0375 18.2625
SPRET/EiJ m 47.65 4.2617 56.0375 39.2625
SWR/J m 49.975 4.2617 58.3625 41.5875




  GWAS USING LINEAR MIXED MODELS