Project measure / variable:   Kliethermes1   dips_HD

ID, description, units MPD:59933   dips_HD   number of head dips in head dip task to assess novelty seeking, 10 min test   [n]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure hole board test
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  STRAIN COMPARISON PLOT
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Kliethermes1 - number of head dips in head dip task to assess novelty seeking, 10 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means58.5   n 53.2   n
Median of the strain means53.2   n 45.6   n
SD of the strain means± 37.3 ± 25.6
Coefficient of variation (CV)0.638 0.481
Min–max range of strain means2.00   –   134   n 15.5   –   99.8   n
Mean sample size per strain6.3   mice 6.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1493.1667 1493.1667 4.3047 0.0396
strain 13 145240.1114 11172.3163 32.2089 < 0.0001
sex:strain 13 12449.9919 957.6917 2.761 0.0015
Residuals 158 54805.4667 346.87


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 22.5 20.1   6 8.2 0.892 -0.96
129S1/SvImJ m 42.5 10.5   6 4.3 0.248 31.0, 60.0 -0.42
A/J f 2.0 3.35   6 1.37 1.67 -1.51
A/J m 18.5 12.7   6 5.19 0.687 6.0, 40.0 -1.36
AKR/J f 67.0 13.5   6 5.51 0.201 45.0, 86.0 0.23
AKR/J m 61.6 14.7   5 6.58 0.239 42.0, 74.0 0.33
BALB/cByJ f 31.6 22.4   5 10.0 0.71 11.0, 69.0 -0.72
BALB/cByJ m 15.5 11.6   6 4.75 0.751 -1.47
BTBR T+ Itpr3tf/J f 33.3 13.0   6 5.29 0.389 14.0, 48.0 -0.68
BTBR T+ Itpr3tf/J m 41.2 8.66   6 3.53 0.21 29.0, 54.0 -0.47
C3H/HeJ f 53.3 8.52   6 3.48 0.16 43.0, 64.0 -0.14
C3H/HeJ m 46.5 14.5   6 5.91 0.312 25.0, 63.0 -0.26
C57BL/6J f 40.1 22.6   12 6.52 0.563 14.0, 86.0 -0.49
C57BL/6J m 38.6 21.2   12 6.11 0.548 8.0, 82.0 -0.57
C57L/J f 72.0 17.2   6 7.0 0.238 44.0, 97.0 0.36
C57L/J m 90.2 24.9   6 10.2 0.276 62.0, 129.0 1.45
DBA/2J f 53.2 17.8   12 5.15 0.335 36.0, 102.0 -0.14
DBA/2J m 48.6 16.4   12 4.75 0.338 15.0, 70.0 -0.18
FVB/NJ f 102.0 13.7   5 6.14 0.134 88.0, 124.0 1.16
FVB/NJ m 74.4 15.7   5 7.03 0.211 47.0, 87.0 0.83
NOD/ShiLtJ f 115.0 43.0   6 17.6 0.373 40.0, 170.0 1.51
NOD/ShiLtJ m 84.5 15.8   6 6.43 0.186 67.0, 105.0 1.22
NZB/BlNJ f 29.7 21.7   6 8.86 0.732 10.0, 65.0 -0.77
NZB/BlNJ m 38.0 8.41   6 3.44 0.221 28.0, 49.0 -0.59
PERA/EiJ f 63.6 13.0   5 5.84 0.205 51.0, 82.0 0.14
PERA/EiJ m 44.8 12.8   6 5.22 0.285 23.0, 62.0 -0.33
PL/J f 134.0 27.0   6 11.0 0.201 112.0, 181.0 2.02
PL/J m 99.8 25.6   5 11.5 0.257 61.0, 127.0 1.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 22.5 7.6034 37.5174 7.4826
129S1/SvImJ m 42.5 7.6034 57.5174 27.4826
A/J f 2.0 7.6034 17.0174 -13.0174
A/J m 18.5 7.6034 33.5174 3.4826
AKR/J f 67.0 7.6034 82.0174 51.9826
AKR/J m 61.6 8.3291 78.0508 45.1492
BALB/cByJ f 31.6 8.3291 48.0508 15.1492
BALB/cByJ m 15.5 7.6034 30.5174 0.4826
BTBR T+ Itpr3tf/J f 33.3333 7.6034 48.3507 18.3159
BTBR T+ Itpr3tf/J m 41.1667 7.6034 56.1841 26.1493
C3H/HeJ f 53.3333 7.6034 68.3507 38.3159
C3H/HeJ m 46.5 7.6034 61.5174 31.4826
C57BL/6J f 40.0833 5.3764 50.7022 29.4644
C57BL/6J m 38.5833 5.3764 49.2022 27.9644
C57L/J f 72.0 7.6034 87.0174 56.9826
C57L/J m 90.1667 7.6034 105.1841 75.1493
DBA/2J f 53.25 5.3764 63.8689 42.6311
DBA/2J m 48.5833 5.3764 59.2022 37.9644
FVB/NJ f 102.4 8.3291 118.8508 85.9492
FVB/NJ m 74.4 8.3291 90.8508 57.9492
NOD/ShiLtJ f 115.3333 7.6034 130.3507 100.3159
NOD/ShiLtJ m 84.5 7.6034 99.5174 69.4826
NZB/BlNJ f 29.6667 7.6034 44.6841 14.6493
NZB/BlNJ m 38.0 7.6034 53.0174 22.9826
PERA/EiJ f 63.6 8.3291 80.0508 47.1492
PERA/EiJ m 44.8333 7.6034 59.8507 29.8159
PL/J f 133.8333 7.6034 148.8507 118.8159
PL/J m 99.8 8.3291 116.2508 83.3492


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 32.5 5.3764 43.1189 21.8811
A/J both 10.25 5.3764 20.8689 -0.3689
AKR/J both 64.3 5.6388 75.4372 53.1628
BALB/cByJ both 23.55 5.6388 34.6872 12.4128
BTBR T+ Itpr3tf/J both 37.25 5.3764 47.8689 26.6311
C3H/HeJ both 49.9167 5.3764 60.5356 39.2978
C57BL/6J both 39.3333 3.8017 46.842 31.8246
C57L/J both 81.0833 5.3764 91.7022 70.4644
DBA/2J both 50.9167 3.8017 58.4254 43.408
FVB/NJ both 88.4 5.8896 100.0324 76.7676
NOD/ShiLtJ both 99.9167 5.3764 110.5356 89.2978
NZB/BlNJ both 33.8333 5.3764 44.4522 23.2144
PERA/EiJ both 54.2167 5.6388 65.3539 43.0795
PL/J both 116.8167 5.6388 127.9539 105.6795




  GWAS USING LINEAR MIXED MODELS