Project measure / variable:   Palmer3   distance

ID, description, units MPD:59212   distance   total distance traveled   [cm]  
Data set, strains Palmer3   F1 Tcf7l2   30 strains     sex: both     age: 7-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Palmer3 - total distance traveled



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means4177   cm 4256   cm
Median of the strain means3972   cm 3898   cm
SD of the strain means± 1616 ± 1517
Coefficient of variation (CV)0.387 0.357
Min–max range of strain means1669   –   8268   cm 2712   –   10282   cm
Mean sample size per strain5.2   mice 5.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3247132.3674 3247132.3674 1.3935 0.2389
strain 28 598892711.019 21389025.3935 9.1792 < 0.0001
sex:strain 28 101735854.6408 3633423.38 1.5593 0.0408
Residuals 249 580208324.3497 2330153.9131


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(129S x B6-Tcf7l2)F1 f 1770.0 1086.0   6 443.0 0.614 29.5, 3091.0 -1.49
(129S x B6-Tcf7l2)F1 m 2712.0 709.0   5 317.0 0.261 2035.0, 3496.0 -1.02
(AJ x B6-Tcf7l2)F1 f 4700.0 2106.0   6 860.0 0.448 1236.0, 7759.0 0.32
(AJ x B6-Tcf7l2)F1 m 2712.0 935.0   4 468.0 0.345 1554.0, 3742.0 -1.02
(AKR x B6-Tcf7l2)F1 f 5237.0 2291.0   4 1145.0 0.437 3249.0, 8267.0 0.66
(AKR x B6-Tcf7l2)F1 m 2890.0 0.0   1   0.0 0.0 2890.0, 2890.0 -0.9
(B6 x B6-Tcf7l2)F1 f 6304.0 3125.0   9 1042.0 0.496 2506.0, 10644.0 1.32
(B6 x B6-Tcf7l2)F1 m 4611.0 1308.0   9 436.0 0.284 1981.0, 6113.0 0.23
(BALB x B6-Tcf7l2)F1 f 2936.0 1143.0   5 511.0 0.389 2033.0, 4786.0 -0.77
(BALB x B6-Tcf7l2)F1 m 4407.0 1384.0   4 692.0 0.314 3224.0, 6026.0 0.1
(BLKS x B6-Tcf7l2)F1 f 3692.0 1201.0   5 537.0 0.325 2320.0, 5203.0 -0.3
(BLKS x B6-Tcf7l2)F1 m 3884.0 809.0   5 362.0 0.208 2840.0, 4807.0 -0.24
(BTBR x B6-Tcf7l2)F1 f 4403.0 2474.0   5 1106.0 0.562 2212.0, 8470.0 0.14
(BTBR x B6-Tcf7l2)F1 m 6041.0 2499.0   5 1118.0 0.414 4322.0, 10295.0 1.18
(BUB x B6-Tcf7l2)F1 f 4754.0 562.0   5 251.0 0.118 3872.0, 5272.0 0.36
(BUB x B6-Tcf7l2)F1 m 4581.0 754.0   5 337.0 0.165 3527.0, 5408.0 0.21
(C3H x B6-Tcf7l2)F1 f 2197.0 888.0   7 336.0 0.404 1029.0, 3258.0 -1.23
(C3H x B6-Tcf7l2)F1 m 3037.0 1231.0   5 550.0 0.405 1926.0, 4452.0 -0.8
(C57L x B6-Tcf7l2)F1 f 6015.0 921.0   4 460.0 0.153 5329.0, 7358.0 1.14
(C57L x B6-Tcf7l2)F1 m 4788.0 535.0   5 239.0 0.112 3927.0, 5389.0 0.35
(C58 x B6-Tcf7l2)F1 f 6824.0 1103.0   4 551.0 0.162 5539.0, 8233.0 1.64
(C58 x B6-Tcf7l2)F1 m 10282.0 2138.0   4 1069.0 0.208 7390.0, 12058.0 3.97
(CBA x B6-Tcf7l2)F1 f 4072.0 1420.0   4 710.0 0.349 2146.0, 5487.0 -0.07
(CBA x B6-Tcf7l2)F1 m 4037.0 1389.0   6 567.0 0.344 2050.0, 5652.0 -0.14
(DBA x B6-Tcf7l2)F1 f 1894.0 1073.0   5 480.0 0.566 818.0, 3086.0 -1.41
(DBA x B6-Tcf7l2)F1 m 2801.0 1064.0   5 476.0 0.38 1860.0, 4550.0 -0.96
(DDY x B6-Tcf7l2)F1 f 3823.0 1210.0   4 605.0 0.316 2941.0, 5599.0 -0.22
(DDY x B6-Tcf7l2)F1 m 3626.0 504.0   5 225.0 0.139 2803.0, 4089.0 -0.41
(FVB x B6-Tcf7l2)F1 f 4023.0 1639.0   4 820.0 0.408 2401.0, 6189.0 -0.1
(FVB x B6-Tcf7l2)F1 m 3727.0 924.0   7 349.0 0.248 2310.0, 4900.0 -0.35
(ILN x B6-Tcf7l2)F1 f 4226.0 1952.0   3 1127.0 0.462 2893.0, 6466.0 0.03
(ILN x B6-Tcf7l2)F1 m 4579.0 3125.0   9 1042.0 0.683 2100.0, 12280.0 0.21
(KK x B6-Tcf7l2)F1 f 2876.0 1278.0   6 522.0 0.444 1676.0, 4808.0 -0.81
(KK x B6-Tcf7l2)F1 m 4195.0 1180.0   3 682.0 0.281 2840.0, 5001.0 -0.04
(LP x B6-Tcf7l2)F1 f 1669.0 1123.0   6 458.0 0.673 862.0, 3359.0 -1.55
(LP x B6-Tcf7l2)F1 m 3703.0 550.0   2   389.0 0.149 3314.0, 4092.0 -0.36
(MA x B6-Tcf7l2)F1 f 3774.0 704.0   5 315.0 0.186 3131.0, 4894.0 -0.25
(MA x B6-Tcf7l2)F1 m 3557.0 543.0   5 243.0 0.153 2651.0, 4029.0 -0.46
(MRL x B6-Tcf7l2)F1 f 4012.0 1378.0   5 616.0 0.344 2674.0, 5748.0 -0.1
(MRL x B6-Tcf7l2)F1 m 3425.0 877.0   5 392.0 0.256 2318.0, 4374.0 -0.55
(NOD x B6-Tcf7l2)F1 f 4495.0 932.0   5 417.0 0.207 3140.0, 5770.0 0.2
(NOD x B6-Tcf7l2)F1 m 5055.0 1507.0   7 570.0 0.298 3126.0, 7561.0 0.53
(NON x B6-Tcf7l2)F1 f 3900.0 1738.0   7 657.0 0.446 2120.0, 7336.0 -0.17
(NON x B6-Tcf7l2)F1 m 3705.0 795.0   8 281.0 0.214 2752.0, 5218.0 -0.36
(NZB x B6-Tcf7l2)F1 f 2816.0 738.0   8 261.0 0.262 1418.0, 3709.0 -0.84
(NZB x B6-Tcf7l2)F1 m 3250.0 1746.0   9 582.0 0.537 926.0, 5441.0 -0.66
(NZW x B6-Tcf7l2)F1 f 2805.0 828.0   4 414.0 0.295 1781.0, 3804.0 -0.85
(NZW x B6-Tcf7l2)F1 m 3103.0 1272.0   5 569.0 0.41 2148.0, 5233.0 -0.76
(PL x B6-Tcf7l2)F1 f 3770.0 1076.0   6 439.0 0.285 2791.0, 5416.0 -0.25
(PL x B6-Tcf7l2)F1 m 4275.0 424.0   4 212.0 0.0992 3658.0, 4627.0 0.01
(RIII x B6-Tcf7l2)F1 f 4911.0 883.0   5 395.0 0.18 3870.0, 6091.0 0.45
(RIII x B6-Tcf7l2)F1 m 3795.0 1431.0   3 826.0 0.377 2741.0, 5424.0 -0.3
(SEA x B6-Tcf7l2)F1 f 7675.0 2160.0   5 966.0 0.281 4950.0, 10561.0 2.16
(SEA x B6-Tcf7l2)F1 m 5476.0 756.0   7 286.0 0.138 4324.0, 6558.0 0.8
(SJL x B6-Tcf7l2)F1 f 3545.0 1193.0   6 487.0 0.336 2073.0, 5120.0 -0.39
(SJL x B6-Tcf7l2)F1 m 4259.0 1941.0   4 971.0 0.456 2228.0, 6892.0 0.0
(SM x B6-Tcf7l2)F1 f 8268.0 3535.0   5 1581.0 0.428 5433.0, 14205.0 2.53
(SM x B6-Tcf7l2)F1 m 7245.0 636.0   5 284.0 0.0878 6502.0, 7964.0 1.97
(SWR x B6-Tcf7l2)F1 f 3933.0 1000.0   4 500.0 0.254 2708.0, 4982.0 -0.15
(SWR x B6-Tcf7l2)F1 m 3912.0 1400.0   4 700.0 0.358 2792.0, 5959.0 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(129S x B6-Tcf7l2)F1 f 1769.75 623.1846 2997.1349 542.3651
(129S x B6-Tcf7l2)F1 m 2712.4 682.6645 4056.9328 1367.8672
(AJ x B6-Tcf7l2)F1 f 4699.7 623.1846 5927.0849 3472.3151
(AJ x B6-Tcf7l2)F1 m 2711.875 763.2421 4215.1084 1208.6416
(B6 x B6-Tcf7l2)F1 f 6304.2333 508.8281 7306.3889 5302.0777
(B6 x B6-Tcf7l2)F1 m 4611.2778 508.8281 5613.4334 3609.1222
(BALB x B6-Tcf7l2)F1 f 2936.46 682.6645 4280.9928 1591.9272
(BALB x B6-Tcf7l2)F1 m 4407.2 763.2421 5910.4334 2903.9666
(BLKS x B6-Tcf7l2)F1 f 3691.56 682.6645 5036.0928 2347.0272
(BLKS x B6-Tcf7l2)F1 m 3884.18 682.6645 5228.7128 2539.6472
(BTBR x B6-Tcf7l2)F1 f 4402.84 682.6645 5747.3728 3058.3072
(BTBR x B6-Tcf7l2)F1 m 6041.08 682.6645 7385.6128 4696.5472
(BUB x B6-Tcf7l2)F1 f 4753.96 682.6645 6098.4928 3409.4272
(BUB x B6-Tcf7l2)F1 m 4581.38 682.6645 5925.9128 3236.8472
(C3H x B6-Tcf7l2)F1 f 2196.5429 576.9568 3332.8805 1060.2052
(C3H x B6-Tcf7l2)F1 m 3036.74 682.6645 4381.2728 1692.2072
(C57L x B6-Tcf7l2)F1 f 6015.425 763.2421 7518.6584 4512.1916
(C57L x B6-Tcf7l2)F1 m 4788.38 682.6645 6132.9128 3443.8472
(C58 x B6-Tcf7l2)F1 f 6823.925 763.2421 8327.1584 5320.6916
(C58 x B6-Tcf7l2)F1 m 10282.4 763.2421 11785.6334 8779.1666
(CBA x B6-Tcf7l2)F1 f 4072.225 763.2421 5575.4584 2568.9916
(CBA x B6-Tcf7l2)F1 m 4036.5667 623.1846 5263.9516 2809.1817
(DBA x B6-Tcf7l2)F1 f 1894.4 682.6645 3238.9328 549.8672
(DBA x B6-Tcf7l2)F1 m 2800.6 682.6645 4145.1328 1456.0672
(DDY x B6-Tcf7l2)F1 f 3823.15 763.2421 5326.3834 2319.9166
(DDY x B6-Tcf7l2)F1 m 3625.86 682.6645 4970.3928 2281.3272
(FVB x B6-Tcf7l2)F1 f 4022.575 763.2421 5525.8084 2519.3416
(FVB x B6-Tcf7l2)F1 m 3727.3857 576.9568 4863.7234 2591.0481
(ILN x B6-Tcf7l2)F1 f 4226.0333 881.316 5961.8178 2490.2489
(ILN x B6-Tcf7l2)F1 m 4578.7333 508.8281 5580.8889 3576.5777
(KK x B6-Tcf7l2)F1 f 2876.1833 623.1846 4103.5683 1648.7984
(KK x B6-Tcf7l2)F1 m 4195.3 881.316 5931.0844 2459.5156
(LP x B6-Tcf7l2)F1 f 1668.9833 623.1846 2896.3683 441.5984
(LP x B6-Tcf7l2)F1 m 3702.9 1079.3873 5828.7931 1577.0069
(MA x B6-Tcf7l2)F1 f 3774.14 682.6645 5118.6728 2429.6072
(MA x B6-Tcf7l2)F1 m 3556.82 682.6645 4901.3528 2212.2872
(MRL x B6-Tcf7l2)F1 f 4011.7 682.6645 5356.2328 2667.1672
(MRL x B6-Tcf7l2)F1 m 3425.32 682.6645 4769.8528 2080.7872
(NOD x B6-Tcf7l2)F1 f 4494.66 682.6645 5839.1928 3150.1272
(NOD x B6-Tcf7l2)F1 m 5055.3857 576.9568 6191.7234 3919.0481
(NON x B6-Tcf7l2)F1 f 3899.8714 576.9568 5036.2091 2763.5338
(NON x B6-Tcf7l2)F1 m 3705.2875 539.6937 4768.234 2642.341
(NZB x B6-Tcf7l2)F1 f 2815.775 539.6937 3878.7215 1752.8285
(NZB x B6-Tcf7l2)F1 m 3250.1 508.8281 4252.2556 2247.9444
(NZW x B6-Tcf7l2)F1 f 2804.625 763.2421 4307.8584 1301.3916
(NZW x B6-Tcf7l2)F1 m 3102.9 682.6645 4447.4328 1758.3672
(PL x B6-Tcf7l2)F1 f 3769.8833 623.1846 4997.2683 2542.4984
(PL x B6-Tcf7l2)F1 m 4274.75 763.2421 5777.9834 2771.5166
(RIII x B6-Tcf7l2)F1 f 4910.9 682.6645 6255.4328 3566.3672
(RIII x B6-Tcf7l2)F1 m 3794.6667 881.316 5530.4511 2058.8822
(SEA x B6-Tcf7l2)F1 f 7675.06 682.6645 9019.5928 6330.5272
(SEA x B6-Tcf7l2)F1 m 5476.2714 576.9568 6612.6091 4339.9338
(SJL x B6-Tcf7l2)F1 f 3545.3167 623.1846 4772.7016 2317.9317
(SJL x B6-Tcf7l2)F1 m 4258.8 763.2421 5762.0334 2755.5666
(SM x B6-Tcf7l2)F1 f 8268.06 682.6645 9612.5928 6923.5272
(SM x B6-Tcf7l2)F1 m 7245.34 682.6645 8589.8728 5900.8072
(SWR x B6-Tcf7l2)F1 f 3933.025 763.2421 5436.2584 2429.7916
(SWR x B6-Tcf7l2)F1 m 3911.7 763.2421 5414.9334 2408.4666


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(129S x B6-Tcf7l2)F1 both 2241.075 462.166 3151.328 1330.822
(AJ x B6-Tcf7l2)F1 both 3705.7875 492.6706 4676.1205 2735.4545
(B6 x B6-Tcf7l2)F1 both 5457.7556 359.7958 6166.3866 4749.1245
(BALB x B6-Tcf7l2)F1 both 3671.83 511.9984 4680.2296 2663.4304
(BLKS x B6-Tcf7l2)F1 both 3787.87 482.7167 4738.5983 2837.1417
(BTBR x B6-Tcf7l2)F1 both 5221.96 482.7167 6172.6883 4271.2317
(BUB x B6-Tcf7l2)F1 both 4667.67 482.7167 5618.3983 3716.9417
(C3H x B6-Tcf7l2)F1 both 2616.6414 446.9088 3496.8448 1736.4381
(C57L x B6-Tcf7l2)F1 both 5401.9025 511.9984 6410.3021 4393.5029
(C58 x B6-Tcf7l2)F1 both 8553.1625 539.6937 9616.109 7490.216
(CBA x B6-Tcf7l2)F1 both 4054.3958 492.6706 5024.7288 3084.0628
(DBA x B6-Tcf7l2)F1 both 2347.5 482.7167 3298.2283 1396.7717
(DDY x B6-Tcf7l2)F1 both 3724.505 511.9984 4732.9046 2716.1054
(FVB x B6-Tcf7l2)F1 both 3874.9804 478.3873 4817.1818 2932.7789
(ILN x B6-Tcf7l2)F1 both 4402.3833 508.8281 5404.5389 3400.2277
(KK x B6-Tcf7l2)F1 both 3535.7417 539.6937 4598.6882 2472.7951
(LP x B6-Tcf7l2)F1 both 2685.9417 623.1846 3913.3266 1458.5567
(MA x B6-Tcf7l2)F1 both 3665.48 482.7167 4616.2083 2714.7517
(MRL x B6-Tcf7l2)F1 both 3718.51 482.7167 4669.2383 2767.7817
(NOD x B6-Tcf7l2)F1 both 4775.0229 446.9088 5655.2262 3894.8195
(NON x B6-Tcf7l2)F1 both 3802.5795 395.0153 4580.5767 3024.5823
(NZB x B6-Tcf7l2)F1 both 3032.9375 370.869 3763.3776 2302.4974
(NZW x B6-Tcf7l2)F1 both 2953.7625 511.9984 3962.1621 1945.3629
(PL x B6-Tcf7l2)F1 both 4022.3167 492.6706 4992.6497 3051.9837
(RIII x B6-Tcf7l2)F1 both 4352.7833 557.3932 5450.5898 3254.9769
(SEA x B6-Tcf7l2)F1 both 6575.6657 446.9088 7455.8691 5695.4624
(SJL x B6-Tcf7l2)F1 both 3902.0583 492.6706 4872.3913 2931.7253
(SM x B6-Tcf7l2)F1 both 7756.7 482.7167 8707.4283 6805.9717
(SWR x B6-Tcf7l2)F1 both 3922.3625 539.6937 4985.309 2859.416




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA