Project measure / variable:   Schughart4   pctbw_trt_d3

ID, description, units MPD:58723   pctbw_trt_d3   body weight as percent of baseline, infected group   [%]  post-infection day 3  
influenza A (H3N2) virus study
Data set, strains Schughart4   inbred w/CC8   8 strains     sex: f     age: 8-12wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schughart4 - body weight as percent of baseline, infected group post-infection day 3



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested8 strains
Mean of the strain means94.9   %
Median of the strain means95.4   %
SD of the strain means± 2.92
Coefficient of variation (CV)0.0308
Min–max range of strain means90.2   –   98.8   %
Mean sample size per strain20.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 1052.2489 150.3213 13.8467 < 0.0001
Residuals 155 1682.6973 10.8561


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 96.4 3.26   17 0.791 0.0338 89.5, 102.0 0.52
A/J f 94.3 3.42   12 0.987 0.0363 87.8, 100.0 -0.2
C57BL/6J f 96.3 3.74   28 0.706 0.0388 89.2, 103.0 0.49
CAST/EiJ f 91.3 2.5   21 0.546 0.0274 87.2, 95.5 -1.22
NOD/ShiLtJ f 97.1 3.46   18 0.815 0.0356 89.0, 101.0 0.76
NZO/HlLtJ f 98.8 3.38   26 0.663 0.0342 89.3, 105.0 1.34
PWK/PhJ f 94.6 3.47   31 0.624 0.0367 86.3, 99.2 -0.09
WSB/EiJ f 90.2 1.84   10 0.583 0.0205 87.7, 92.3 -1.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 96.4188 0.7991 97.9974 94.8402
A/J f 94.2775 0.9511 96.1564 92.3986
C57BL/6J f 96.2979 0.6227 97.5279 95.0678
CAST/EiJ f 91.3238 0.719 92.7441 89.9035
NOD/ShiLtJ f 97.0667 0.7766 98.6008 95.5326
NZO/HlLtJ f 98.8265 0.6462 100.103 97.5501
PWK/PhJ f 94.6203 0.5918 95.7893 93.4513
WSB/EiJ f 90.155 1.0419 92.2132 88.0968




  GWAS USING LINEAR MIXED MODELS