Project measure / variable:   Schughart4   pctbw_trt_d2

ID, description, units MPD:58722   pctbw_trt_d2   body weight as percent of baseline, infected group   [%]  post-infection day 2  
influenza A (H3N2) virus study
Data set, strains Schughart4   inbred w/CC8   8 strains     sex: f     age: 8-12wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schughart4 - body weight as percent of baseline, infected group post-infection day 2



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested8 strains
Mean of the strain means97.4   %
Median of the strain means97.9   %
SD of the strain means± 2.76
Coefficient of variation (CV)0.0283
Min–max range of strain means91.4   –   100   %
Mean sample size per strain20.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 1477.8859 211.1266 30.1847 < 0.0001
Residuals 155 1084.1441 6.9945


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 97.6 3.13   17 0.759 0.0321 91.0, 105.0 0.08
A/J f 98.2 2.56   12 0.738 0.026 94.8, 102.0 0.3
C57BL/6J f 98.5 2.48   28 0.469 0.0252 95.1, 104.0 0.41
CAST/EiJ f 97.5 2.44   21 0.533 0.0251 91.3, 102.0 0.05
NOD/ShiLtJ f 100.0 2.06   18 0.486 0.0206 96.6, 104.0 0.95
NZO/HlLtJ f 99.9 3.07   26 0.602 0.0307 91.2, 105.0 0.92
PWK/PhJ f 91.4 2.58   31 0.463 0.0282 84.3, 95.7 -2.17
WSB/EiJ f 95.9 2.62   10 0.829 0.0273 92.3, 99.5 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 97.5847 0.6414 98.8518 96.3176
A/J f 98.2433 0.7635 99.7515 96.7352
C57BL/6J f 98.4714 0.4998 99.4587 97.4841
CAST/EiJ f 97.4733 0.5771 98.6134 96.3333
NOD/ShiLtJ f 100.2617 0.6234 101.4931 99.0303
NZO/HlLtJ f 99.9238 0.5187 100.9484 98.8993
PWK/PhJ f 91.4158 0.475 92.3541 90.4775
WSB/EiJ f 95.9 0.8363 97.5521 94.2479




  GWAS USING LINEAR MIXED MODELS