Project measure / variable:   GMC12   bw

ID, description, units MPD:56101   bw   body weight   [g]  
Data set, strains GMC12   inbred w/CC8   8 strains     sex: both     age: 14-15wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC12 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means22.5   g 27.4   g
Median of the strain means20.5   g 24.5   g
SD of the strain means± 10.9 ± 12.4
Coefficient of variation (CV)0.484 0.453
Min–max range of strain means13.2   –   47.5   g 16.8   –   55.5   g
Mean sample size per strain13.0   mice 12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1361.7984 1361.7984 350.1411 < 0.0001
strain 7 24595.5399 3513.6486 903.4176 < 0.0001
sex:strain 7 155.1665 22.1666 5.6994 < 0.0001
Residuals 188 731.1856 3.8893


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 21.3 1.63   12 0.47 0.0766 18.5, 23.9 -0.11
129S1/SvImJ m 24.9 2.16   12 0.623 0.0865 23.0, 29.0 -0.2
A/J f 19.6 1.28   11 0.386 0.0654 16.8, 21.3 -0.26
A/J m 24.1 1.28   12 0.369 0.053 22.1, 27.1 -0.27
C57BL/6J f 22.2 1.23   12 0.356 0.0555 20.5, 24.0 -0.02
C57BL/6J m 29.6 1.76   12 0.507 0.0593 26.9, 32.3 0.18
CAST/EiJ f 14.3 0.646   13 0.179 0.0452 13.4, 15.6 -0.75
CAST/EiJ m 17.7 0.621   10 0.196 0.0351 16.7, 18.7 -0.78
NOD/ShiLtJ f 24.8 1.42   14 0.379 0.0572 22.6, 27.1 0.22
NOD/ShiLtJ m 30.6 2.34   12 0.675 0.0764 27.3, 35.4 0.26
NZO/HlLtJ f 47.5 3.27   13 0.907 0.0688 42.2, 54.5 2.3
NZO/HlLtJ m 55.5 3.62   13 1.0 0.0653 49.6, 60.8 2.26
PWK/PhJ f 16.7 1.57   15 0.406 0.0941 14.0, 18.8 -0.53
PWK/PhJ m 20.1 2.12   17 0.515 0.106 16.3, 23.4 -0.59
WSB/EiJ f 13.2 2.23   14 0.595 0.168 11.0, 18.7 -0.85
WSB/EiJ m 16.8 1.13   12 0.327 0.0676 14.8, 18.0 -0.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 21.2833 0.5693 22.4064 20.1603
129S1/SvImJ m 24.9333 0.5693 26.0564 23.8103
A/J f 19.5818 0.5946 20.7548 18.4088
A/J m 24.1167 0.5693 25.2397 22.9936
C57BL/6J f 22.25 0.5693 23.373 21.127
C57BL/6J m 29.6417 0.5693 30.7647 28.5186
CAST/EiJ f 14.3077 0.547 15.3867 13.2287
CAST/EiJ m 17.69 0.6236 18.9202 16.4598
NOD/ShiLtJ f 24.8143 0.5271 25.854 23.7745
NOD/ShiLtJ m 30.5833 0.5693 31.7064 29.4603
NZO/HlLtJ f 47.5462 0.547 48.6251 46.4672
NZO/HlLtJ m 55.4846 0.547 56.5636 54.4056
PWK/PhJ f 16.7067 0.5092 17.7111 15.7022
PWK/PhJ m 20.1294 0.4783 21.073 19.1859
WSB/EiJ f 13.25 0.5271 14.2897 12.2103
WSB/EiJ m 16.7583 0.5693 17.8814 15.6353


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.1083 0.4026 23.9024 22.3142
A/J both 21.8492 0.4116 22.6612 21.0373
C57BL/6J both 25.9458 0.4026 26.7399 25.1517
CAST/EiJ both 15.9988 0.4148 16.817 15.1807
NOD/ShiLtJ both 27.6988 0.3879 28.464 26.9336
NZO/HlLtJ both 51.5154 0.3868 52.2783 50.7524
PWK/PhJ both 18.418 0.3493 19.1071 17.729
WSB/EiJ both 15.0042 0.3879 15.7694 14.2389




  GWAS USING LINEAR MIXED MODELS