Project measure / variable:   Shin1   novelty_stranger2

ID, description, units MPD:54510   novelty_stranger2   time spent with novel stranger2 mouse during 10 min test   [s]  
Data set, strains Shin1   inbred   11 strains     sex: m     age: 12-14wks
Procedure three chamber assay
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  STRAIN COMPARISON PLOT
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Shin1 - time spent with novel stranger2 mouse during 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means232   s
Median of the strain means240   s
SD of the strain means± 50.1
Coefficient of variation (CV)0.216
Min–max range of strain means138   –   295   s
Mean sample size per strain11.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 304574.4235 30457.4423 2.0003 0.039
Residuals 119 1811926.2658 15226.2711


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 138.0 190.0   13 52.8 1.38 -1.87
129S4/SvJaeJ m 170.0 174.0   12 50.3 1.03 -1.23
AKR/J m 258.0 75.7   12 21.9 0.294 126.0, 367.0 0.53
BALB/cByJ m 240.0 108.0   10 34.2 0.452 152.0, 491.0 0.17
BTBR T+ Itpr3tf/J m 295.0 118.0   12 34.1 0.4 89.0, 472.0 1.26
C3H/HeJ m 195.0 136.0   13 37.8 0.697 18.1, 488.0 -0.73
C57BL/6J m 295.0 35.7   11 10.8 0.121 215.0, 354.0 1.26
C57BL/6NTac m 205.0 109.0   10 34.4 0.532 0.23, 409.0 -0.53
DBA/2J m 271.0 138.0   11 41.5 0.508 2.9, 494.0 0.79
FVB/NJ m 244.0 78.3   13 21.7 0.321 107.0, 388.0 0.25
NOD/ShiLtJ m 237.0 98.7   13 27.4 0.416 76.3, 395.0 0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 138.3054 34.2236 206.0714 70.5393
129S4/SvJaeJ m 169.7508 35.621 240.284 99.2177
AKR/J m 257.5092 35.621 328.0423 186.976
BALB/cByJ m 239.76 39.0209 317.0252 162.4948
BTBR T+ Itpr3tf/J m 295.4825 35.621 366.0156 224.9494
C3H/HeJ m 195.4323 34.2236 263.1984 127.6663
C57BL/6J m 294.9436 37.2049 368.6131 221.2742
C57BL/6NTac m 204.506 39.0209 281.7712 127.2408
DBA/2J m 271.0927 37.2049 344.7622 197.4233
FVB/NJ m 243.9254 34.2236 311.6914 176.1593
NOD/ShiLtJ m 237.3923 34.2236 305.1584 169.6263




  GWAS USING LINEAR MIXED MODELS