Project measure / variable:   Reed2   pericardial_fat

ID, description, units MPD:53114   pericardial_fat   pericardial fat pad weight   [g]  
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Reed2 - pericardial fat pad weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.00885   g 0.00644   g
Median of the strain means0.00500   g 0.00571   g
SD of the strain means± 0.00864 ± 0.00427
Coefficient of variation (CV)0.976 0.662
Min–max range of strain means0.00200   –   0.0275   g 0.00182   –   0.0160   g
Mean sample size per strain17.6   mice 16.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0008 0.0008 9.5773 0.0022
strain 8 0.0063 0.0008 9.1035 < 0.0001
sex:strain 8 0.0057 0.0007 8.1767 < 0.0001
Residuals 277 0.0241 0.0001


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 0.00211 0.00419   19 0.000961 1.99 -0.78
129P3.B6By-Chr1 m 0.00526 0.00772   19 0.00177 1.47 -0.28
129P3.B6By-Chr2 f 0.005 0.00577   4 0.00289 1.15 -0.45
129P3.B6By-Chr2 m 0.016 0.0114   5 0.0051 0.713 2.24
129P3.B6By-Chr7 f 0.00421 0.00607   19 0.00139 1.44 -0.54
129P3.B6By-Chr7 m 0.0065 0.00587   20 0.00131 0.903 0.01
129P3.B6By-Chr9 f 0.002 0.00422   10 0.00133 2.11 -0.79
129P3.B6By-Chr9 m 0.00182 0.00405   11 0.00122 2.22 -1.08
129P3/J f 0.00333 0.00637   24 0.0013 1.91 -0.64
129P3/J m 0.00357 0.00633   14 0.00169 1.77 -0.67
B6By.129P3-Chr2 f 0.018 0.0147   15 0.0038 0.819 1.06
B6By.129P3-Chr2 m 0.00333 0.00488   15 0.00126 1.46 -0.73
B6By.129P3-Chr7 f 0.0105 0.011   20 0.00246 1.05 0.19
B6By.129P3-Chr7 m 0.01 0.00973   20 0.00218 0.973 0.83
B6By.129P3-Chr9 f 0.0275 0.0205   20 0.00458 0.745 2.16
B6By.129P3-Chr9 m 0.00579 0.00769   19 0.00176 1.33 -0.15
C57BL/6ByJ f 0.007 0.00733   20 0.00164 1.05 -0.21
C57BL/6ByJ m 0.00571 0.0087   21 0.0019 1.52 -0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 0.0021 0.0021 0.0063 0.0
129P3.B6By-Chr1 m 0.0053 0.0021 0.0095 0.001
129P3.B6By-Chr2 f 0.005 0.0047 0.0142 0.0
129P3.B6By-Chr2 m 0.016 0.0042 0.0242 0.0078
129P3.B6By-Chr7 f 0.0042 0.0021 0.0084 0.0
129P3.B6By-Chr7 m 0.0065 0.0021 0.0106 0.0024
129P3.B6By-Chr9 f 0.002 0.003 0.0078 0.0
129P3.B6By-Chr9 m 0.0018 0.0028 0.0074 0.0
129P3/J f 0.0033 0.0019 0.0071 0.0
129P3/J m 0.0036 0.0025 0.0085 0.0
B6By.129P3-Chr2 f 0.018 0.0024 0.0227 0.0133
B6By.129P3-Chr2 m 0.0033 0.0024 0.0081 0.0
B6By.129P3-Chr7 f 0.0105 0.0021 0.0146 0.0064
B6By.129P3-Chr7 m 0.01 0.0021 0.0141 0.0059
B6By.129P3-Chr9 f 0.0275 0.0021 0.0316 0.0234
B6By.129P3-Chr9 m 0.0058 0.0021 0.01 0.0016
C57BL/6ByJ f 0.007 0.0021 0.0111 0.0029
C57BL/6ByJ m 0.0057 0.002 0.0097 0.0017


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 0.0037 0.0015 0.0067 0.0007
129P3.B6By-Chr2 both 0.0105 0.0031 0.0167 0.0043
129P3.B6By-Chr7 both 0.0054 0.0015 0.0083 0.0024
129P3.B6By-Chr9 both 0.0019 0.002 0.0059 0.0
129P3/J both 0.0035 0.0016 0.0065 0.0004
B6By.129P3-Chr2 both 0.0107 0.0017 0.014 0.0073
B6By.129P3-Chr7 both 0.0103 0.0015 0.0132 0.0073
B6By.129P3-Chr9 both 0.0166 0.0015 0.0196 0.0137
C57BL/6ByJ both 0.0064 0.0015 0.0092 0.0035




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA