Project measure / variable:   Tarantino2   OFT_distance_ctrl

ID, description, units MPD:50601   OFT_distance_ctrl   distance traveled, 10 min test   [cm]  control  
ovariectomy study
Data set, strains Tarantino2   inbred   37 strains     sex: f     age: 10-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Tarantino2 - distance traveled, 10 min test control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested37 strains
Mean of the strain means2473   cm
Median of the strain means2369   cm
SD of the strain means± 1164
Coefficient of variation (CV)0.471
Min–max range of strain means503   –   5930   cm
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 36 425229663.1384 11811935.0872 9.7698 < 0.0001
Residuals 316 382053185.6775 1209029.0686


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 735.0 608.0   10 192.0 0.826 61.0, 1705.0 -1.49
A/J f 503.0 363.0   11 109.0 0.721 21.0, 1041.0 -1.69
AKR/J f 2982.0 733.0   11 221.0 0.246 1915.0, 4216.0 0.44
BALB/cByJ f 2189.0 311.0   11 93.7 0.142 1718.0, 2706.0 -0.24
BTBR T+ Itpr3tf/J f 2753.0 589.0   11 177.0 0.214 1769.0, 3775.0 0.24
C3H/HeJ f 1214.0 318.0   11 96.0 0.262 706.0, 1833.0 -1.08
C57BL/6J f 2846.0 636.0   20 142.0 0.223 1184.0, 3607.0 0.32
C57BR/cdJ f 5930.0 3239.0   6 1322.0 0.546 3187.0, 11860.0 2.97
C57L/J f 2242.0 612.0   11 185.0 0.273 1526.0, 3468.0 -0.2
C58/J f 4989.0 3208.0   10 1015.0 0.643 2400.0, 11172.0 2.16
CBA/J f 1013.0 390.0   11 117.0 0.385 435.0, 1631.0 -1.25
CZECHII/EiJ f 2369.0 349.0   5 156.0 0.147 1951.0, 2824.0 -0.09
DBA/2J f 1073.0 592.0   9 197.0 0.552 90.0, 2100.0 -1.2
FVB/NJ f 2673.0 393.0   10 124.0 0.147 2161.0, 3378.0 0.17
I/LnJ f 2918.0 746.0   12 215.0 0.255 1424.0, 3872.0 0.38
KK/HlJ f 1804.0 464.0   6 189.0 0.257 1278.0, 2309.0 -0.57
LG/J f 2266.0 791.0   10 250.0 0.349 269.0, 3227.0 -0.18
LP/J f 1623.0 522.0   9 174.0 0.322 765.0, 2556.0 -0.73
MA/MyJ f 3800.0 696.0   9 232.0 0.183 2753.0, 5233.0 1.14
MOLF/EiJ f 2468.0 480.0   7 181.0 0.194 1919.0, 3431.0 0.0
MRL/MpJ f 2347.0 425.0   10 134.0 0.181 1846.0, 3130.0 -0.11
NOD/ShiLtJ f 3521.0 1999.0   10 632.0 0.568 917.0, 8580.0 0.9
NON/ShiLtJ f 3951.0 3105.0   12 896.0 0.786 1810.0, 13003.0 1.27
NOR/LtJ f 3140.0 828.0   12 239.0 0.264 1986.0, 4516.0 0.57
NZO/HlLtJ f 728.0 246.0   7 93.1 0.338 229.0, 1035.0 -1.5
NZW/LacJ f 1615.0 315.0   10 99.6 0.195 1266.0, 2107.0 -0.74
PERA/EiJ f 1882.0 657.0   8 232.0 0.349 1233.0, 3058.0 -0.51
P/J f 2581.0 556.0   8 197.0 0.216 1702.0, 3231.0 0.09
PL/J f 2968.0 416.0   10 131.0 0.14 2281.0, 3804.0 0.43
PWD/PhJ f 1870.0 668.0   6 273.0 0.357 1165.0, 2883.0 -0.52
RIIIS/J f 3016.0 471.0   6 192.0 0.156 2561.0, 3861.0 0.47
SEA/GnJ f 1595.0 574.0   6 234.0 0.36 1000.0, 2536.0 -0.75
SJL/J f 1825.0 486.0   10 154.0 0.266 1044.0, 2650.0 -0.56
SM/J f 2670.0 676.0   12 195.0 0.253 1614.0, 3749.0 0.17
SWR/J f 2295.0 333.0   12 96.1 0.145 1787.0, 2853.0 -0.15
WSB/EiJ f 4476.0 1218.0   8 431.0 0.272 2804.0, 6428.0 1.72
ZALENDE/EiJ f 2625.0 368.0   6 150.0 0.14 2124.0, 3006.0 0.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 735.3 347.711 1419.4211 51.1789
A/J f 503.2727 331.5294 1155.5566 0.0
AKR/J f 2981.8182 331.5294 3634.1021 2329.5343
BALB/cByJ f 2188.5455 331.5294 2840.8294 1536.2615
BTBR T+ Itpr3tf/J f 2753.3636 331.5294 3405.6475 2101.0797
C3H/HeJ f 1214.2727 331.5294 1866.5566 561.9888
C57BL/6J f 2846.3 245.8688 3330.0467 2362.5533
C57BR/cdJ f 5930.3333 448.8929 6813.5299 5047.1367
C57L/J f 2242.0 331.5294 2894.2839 1589.7161
C58/J f 4989.0 347.711 5673.1211 4304.8789
CBA/J f 1013.0909 331.5294 1665.3748 360.807
CZECHII/EiJ f 2369.2 491.7375 3336.6934 1401.7066
DBA/2J f 1072.6667 366.5195 1793.7937 351.5397
FVB/NJ f 2672.9 347.711 3357.0211 1988.7789
I/LnJ f 2918.25 317.4152 3542.7643 2293.7357
KK/HlJ f 1804.5 448.8929 2687.6966 921.3034
LG/J f 2265.6 347.711 2949.7211 1581.4789
LP/J f 1623.1111 366.5195 2344.2381 901.9841
MA/MyJ f 3799.5556 366.5195 4520.6825 3078.4286
MOLF/EiJ f 2468.2857 415.5941 3285.9669 1650.6046
MRL/MpJ f 2347.3 347.711 3031.4211 1663.1789
NOD/ShiLtJ f 3520.7 347.711 4204.8211 2836.5789
NON/ShiLtJ f 3951.25 317.4152 4575.7643 3326.7357
NOR/LtJ f 3140.3333 317.4152 3764.8476 2515.819
NZO/HlLtJ f 728.4286 415.5941 1546.1097 0.0
NZW/LacJ f 1615.4 347.711 2299.5211 931.2789
PERA/EiJ f 1882.375 388.7527 2647.2457 1117.5043
P/J f 2580.625 388.7527 3345.4957 1815.7543
PL/J f 2967.7 347.711 3651.8211 2283.5789
PWD/PhJ f 1869.6667 448.8929 2752.8633 986.4701
RIIIS/J f 3016.1667 448.8929 3899.3633 2132.9701
SEA/GnJ f 1594.8333 448.8929 2478.0299 711.6367
SJL/J f 1825.3 347.711 2509.4211 1141.1789
SM/J f 2670.4167 317.4152 3294.931 2045.9024
SWR/J f 2295.3333 317.4152 2919.8476 1670.819
WSB/EiJ f 4476.125 388.7527 5240.9957 3711.2543
ZALENDE/EiJ f 2625.1667 448.8929 3508.3633 1741.9701




  GWAS USING LINEAR MIXED MODELS