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Project measure / variable:   HMDPpheno8   arachidonate

ID, description, units MPD:50356   arachidonate   liver arachidonate (20:4n6) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver arachidonate (20:4n6) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means8509892   None
Median of the strain means8226800   None
SD of the strain means± 1864933
Coefficient of variation (CV)0.219
Min–max range of strain means4569424   –   13869594   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 182064662522175.0 8669745834389.28 2.0067 0.0343
Residuals 34 146893646610515.0 4320401370897.5


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 10009684.0 0.0   1   0.0 0.0 10009684.0, 10009684.0 0.8
A/J m 8207792.0 1251112.0   2   884670.0 0.152 7323123.0, 9092462.0 -0.16
AKR/J m 9221737.0 0.0   1   0.0 0.0 9221737.0, 9221737.0 0.38
AXB10/PgnJ m 8726228.0 0.0   1   0.0 0.0 8726228.0, 8726228.0 0.12
AXB12/PgnJ m 10119617.0 0.0   1   0.0 0.0 10119617.0, 10119617.0 0.86
AXB13/PgnJ m 6483436.0 0.0   1   0.0 0.0 6483436.0, 6483436.0 -1.09
AXB15/PgnJ m 9050927.0 0.0   1   0.0 0.0 9050927.0, 9050927.0 0.29
AXB19a/PgnJ m 7328461.0 0.0   1   0.0 0.0 7328461.0, 7328461.0 -0.63
AXB19b/PgnJ m 7182610.0 402376.0   2   284522.0 0.056 6898088.0, 7467132.0 -0.71
AXB19/PgnJ m 10027834.0 0.0   1   0.0 0.0 10027834.0, 10027834.0 0.81
AXB1/PgnJ m 7861932.0 0.0   1   0.0 0.0 7861932.0, 7861932.0 -0.35
AXB23/PgnJ m 13144449.0 0.0   1   0.0 0.0 13144449.0, 13144449.0 2.49
AXB24/PgnJ m 8755528.0 719392.0   2   508687.0 0.0822 8246840.0, 9264215.0 0.13
AXB2/PgnJ m 8866407.0 0.0   1   0.0 0.0 8866407.0, 8866407.0 0.19
AXB4/PgnJ m 7409297.0 0.0   1   0.0 0.0 7409297.0, 7409297.0 -0.59
AXB5/PgnJ m 7234047.0 0.0   1   0.0 0.0 7234047.0, 7234047.0 -0.68
AXB6/PgnJ m 8282380.0 0.0   1   0.0 0.0 8282380.0, 8282380.0 -0.12
AXB8/PgnJ m 8948447.0 0.0   1   0.0 0.0 8948447.0, 8948447.0 0.24
BALB/cJ m 11200730.0 752525.0   3 434470.0 0.0672 10501065.0, 11996819.0 1.44
BTBR T+ Itpr3tf/J m 5995366.0 0.0   1   0.0 0.0 5995366.0, 5995366.0 -1.35
BUB/BnJ m 10825479.0 0.0   1   0.0 0.0 10825479.0, 10825479.0 1.24
BXA11/PgnJ m 12493885.0 0.0   1   0.0 0.0 12493885.0, 12493885.0 2.14
BXA12/PgnJ m 9211745.0 0.0   1   0.0 0.0 9211745.0, 9211745.0 0.38
BXA13/PgnJ m 8471398.0 0.0   1   0.0 0.0 8471398.0, 8471398.0 -0.02
BXA14/PgnJ m 7922795.0 0.0   1   0.0 0.0 7922795.0, 7922795.0 -0.31
BXA16/PgnJ m 7764117.0 2360349.0   2   1669019.0 0.304 6095098.0, 9433136.0 -0.4
BXA1/PgnJ m 12057618.0 0.0   1   0.0 0.0 12057618.0, 12057618.0 1.9
BXA24/PgnJ m 8141580.0 0.0   1   0.0 0.0 8141580.0, 8141580.0 -0.2
BXA25/PgnJ m 7347616.0 0.0   1   0.0 0.0 7347616.0, 7347616.0 -0.62
BXA26/PgnJ m 13635268.0 0.0   1   0.0 0.0 13635268.0, 13635268.0 2.75
BXA2/PgnJ m 8605036.0 0.0   1   0.0 0.0 8605036.0, 8605036.0 0.05
BXA4/PgnJ m 4569424.0 0.0   1   0.0 0.0 4569424.0, 4569424.0 -2.11
BXA7/PgnJ m 6469698.0 0.0   1   0.0 0.0 6469698.0, 6469698.0 -1.09
BXA8/PgnJ m 13869594.0 0.0   1   0.0 0.0 13869594.0, 13869594.0 2.87
BXD11/TyJ m 6407330.0 0.0   1   0.0 0.0 6407330.0, 6407330.0 -1.13
BXD12/TyJ m 8050404.0 0.0   1   0.0 0.0 8050404.0, 8050404.0 -0.25
BXD13/TyJ m 7584742.0 0.0   1   0.0 0.0 7584742.0, 7584742.0 -0.5
BXD14/TyJ m 7861970.0 0.0   1   0.0 0.0 7861970.0, 7861970.0 -0.35
BXD15/TyJ m 7865374.0 0.0   1   0.0 0.0 7865374.0, 7865374.0 -0.35
BXD18/TyJ m 7728900.0 0.0   1   0.0 0.0 7728900.0, 7728900.0 -0.42
BXD19/TyJ m 7187478.0 1530380.0   2   1082142.0 0.213 6105336.0, 8269620.0 -0.71
BXD1/TyJ m 8254209.0 0.0   1   0.0 0.0 8254209.0, 8254209.0 -0.14
BXD20/TyJ m 6196182.0 0.0   1   0.0 0.0 6196182.0, 6196182.0 -1.24
BXD21/TyJ m 7689414.0 0.0   1   0.0 0.0 7689414.0, 7689414.0 -0.44
BXD22/TyJ m 8482268.0 0.0   1   0.0 0.0 8482268.0, 8482268.0 -0.01
BXD24/TyJ m 7257132.0 0.0   1   0.0 0.0 7257132.0, 7257132.0 -0.67
BXD24/TyJ-Cep290rd16/J m 6485104.0 0.0   1   0.0 0.0 6485104.0, 6485104.0 -1.09
BXD28/TyJ m 7903566.0 278145.0   2   196678.0 0.0352 7706888.0, 8100244.0 -0.33
BXD29-Tlr4lps-2J/J m 6931517.0 0.0   1   0.0 0.0 6931517.0, 6931517.0 -0.85
BXD2/TyJ m 7800680.0 0.0   1   0.0 0.0 7800680.0, 7800680.0 -0.38
BXD32/TyJ m 9939858.0 0.0   1   0.0 0.0 9939858.0, 9939858.0 0.77
BXD33/TyJ m 5345210.0 0.0   1   0.0 0.0 5345210.0, 5345210.0 -1.7
BXD34/TyJ m 7242782.0 0.0   1   0.0 0.0 7242782.0, 7242782.0 -0.68
BXD36/TyJ m 7704573.0 0.0   1   0.0 0.0 7704573.0, 7704573.0 -0.43
BXD38/TyJ m 7807216.0 0.0   1   0.0 0.0 7807216.0, 7807216.0 -0.38
BXD39/TyJ m 10084794.0 0.0   1   0.0 0.0 10084794.0, 10084794.0 0.84
BXD40/TyJ m 8803377.0 0.0   1   0.0 0.0 8803377.0, 8803377.0 0.16
BXD42/TyJ m 6953114.0 0.0   1   0.0 0.0 6953114.0, 6953114.0 -0.83
BXD5/TyJ m 9587232.0 0.0   1   0.0 0.0 9587232.0, 9587232.0 0.58
BXD6/TyJ m 7448656.0 0.0   1   0.0 0.0 7448656.0, 7448656.0 -0.57
BXD8/TyJ m 8245809.0 0.0   1   0.0 0.0 8245809.0, 8245809.0 -0.14
BXD9/TyJ m 8678939.0 0.0   1   0.0 0.0 8678939.0, 8678939.0 0.09
BXH10/TyJ m 7759904.0 0.0   1   0.0 0.0 7759904.0, 7759904.0 -0.4
BXH19/TyJ m 7829938.0 0.0   1   0.0 0.0 7829938.0, 7829938.0 -0.36
BXH20/KccJ m 7418510.0 0.0   1   0.0 0.0 7418510.0, 7418510.0 -0.59
BXH22/KccJ m 9085184.0 0.0   1   0.0 0.0 9085184.0, 9085184.0 0.31
BXH2/TyJ m 8260434.0 0.0   1   0.0 0.0 8260434.0, 8260434.0 -0.13
BXH4/TyJ m 7762501.0 503480.0   2   356014.0 0.0649 7406486.0, 8118515.0 -0.4
BXH6/TyJ m 5894579.0 0.0   1   0.0 0.0 5894579.0, 5894579.0 -1.4
BXH7/TyJ m 8073264.0 0.0   1   0.0 0.0 8073264.0, 8073264.0 -0.23
BXH8/TyJ m 9294441.0 0.0   1   0.0 0.0 9294441.0, 9294441.0 0.42
BXH9/TyJ m 9886462.0 0.0   1   0.0 0.0 9886462.0, 9886462.0 0.74
C3H/HeJ m 10833481.0 3532436.0   2   2497809.0 0.326 8335672.0, 13331290.0 1.25
C57BL/6J m 7736147.0 2464758.0   5 1102273.0 0.319 3582364.0, 10119327.0 -0.41
C57L/J m 9761958.0 0.0   1   0.0 0.0 9761958.0, 9761958.0 0.67
C58/J m 8312892.0 0.0   1   0.0 0.0 8312892.0, 8312892.0 -0.11
CAST/EiJ m 5507760.0 0.0   1   0.0 0.0 5507760.0, 5507760.0 -1.61
CBA/J m 10456701.0 0.0   1   0.0 0.0 10456701.0, 10456701.0 1.04
CE/J m 7991039.0 0.0   1   0.0 0.0 7991039.0, 7991039.0 -0.28
CXB11/HiAJ m 7404683.0 845202.0   2   597648.0 0.114 6807035.0, 8002332.0 -0.59
CXB12/HiAJ m 9822314.0 555023.0   2   392460.0 0.0565 9429854.0, 10214775.0 0.7
CXB13/HiAJ m 11765522.0 914107.0   3 527760.0 0.0777 10802027.0, 12620565.0 1.75
CXB1/ByJ m 10136447.0 1540041.0   3 889143.0 0.152 8529518.0, 11599504.0 0.87
CXB2/ByJ m 9314543.0 1368681.0   3 790208.0 0.147 8231916.0, 10852965.0 0.43
CXB3/ByJ m 9104704.0 903574.0   2   638923.0 0.0992 8465781.0, 9743628.0 0.32
CXB4/ByJ m 11836976.0 224637.0   2   158842.0 0.019 11678133.0, 11995818.0 1.78
CXB6/ByJ m 5855169.0 2655028.0   3 1532881.0 0.453 3910656.0, 8880064.0 -1.42
CXB7/ByJ m 8991320.0 1433414.0   2   1013576.0 0.159 7977743.0, 10004896.0 0.26
CXB8/HiAJ m 12231930.0 5606442.0   3 3236881.0 0.458 8427853.0, 18670370.0 2.0
CXB9/HiAJ m 10874674.0 1658845.0   3 957735.0 0.153 9357250.0, 12645728.0 1.27
DBA/2J m 7511056.0 800518.0   4 400259.0 0.107 6523971.0, 8328303.0 -0.54
FVB/NJ m 4832442.0 0.0   1   0.0 0.0 4832442.0, 4832442.0 -1.97
I/LnJ m 7509262.0 0.0   1   0.0 0.0 7509262.0, 7509262.0 -0.54
KK/HlJ m 8576619.0 0.0   1   0.0 0.0 8576619.0, 8576619.0 0.04
LG/J m 7035678.0 0.0   1   0.0 0.0 7035678.0, 7035678.0 -0.79
LP/J m 6481094.0 0.0   1   0.0 0.0 6481094.0, 6481094.0 -1.09
MA/MyJ m 8777603.0 0.0   1   0.0 0.0 8777603.0, 8777603.0 0.14
NOD/ShiLtJ m 13027321.0 0.0   1   0.0 0.0 13027321.0, 13027321.0 2.42
NON/ShiLtJ m 6398376.0 0.0   1   0.0 0.0 6398376.0, 6398376.0 -1.13
NZW/LacJ m 9163105.0 0.0   1   0.0 0.0 9163105.0, 9163105.0 0.35
PL/J m 8250410.0 0.0   1   0.0 0.0 8250410.0, 8250410.0 -0.14
RIIIS/J m 10535976.0 0.0   1   0.0 0.0 10535976.0, 10535976.0 1.09
SEA/GnJ m 9536719.0 0.0   1   0.0 0.0 9536719.0, 9536719.0 0.55
SJL/J m 6487374.0 0.0   1   0.0 0.0 6487374.0, 6487374.0 -1.08
SM/J m 5869537.0 0.0   1   0.0 0.0 5869537.0, 5869537.0 -1.42
SWR/J m 9882543.0 0.0   1   0.0 0.0 9882543.0, 9882543.0 0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 8207792.5 1469762.1187 11194708.4957 5220876.5043
AXB19b/PgnJ m 7182610.0 1469762.1187 10169525.9957 4195694.0043
AXB24/PgnJ m 8755527.75 1469762.1187 11742443.7457 5768611.7543
BALB/cJ m 11200730.0 1200055.7447 13639536.698 8761923.302
BXA16/PgnJ m 7764117.25 1469762.1187 10751033.2457 4777201.2543
BXD19/TyJ m 7187477.5 1469762.1187 10174393.4957 4200561.5043
BXD28/TyJ m 7903565.5 1469762.1187 10890481.4957 4916649.5043
BXH4/TyJ m 7762500.75 1469762.1187 10749416.7457 4775584.7543
C3H/HeJ m 10833480.75 1469762.1187 13820396.7457 7846564.7543
C57BL/6J m 7736147.36 929559.1827 9625238.9052 5847055.8148
CXB11/HiAJ m 7404683.25 1469762.1187 10391599.2457 4417767.2543
CXB12/HiAJ m 9822314.5 1469762.1187 12809230.4957 6835398.5043
CXB13/HiAJ m 11765521.6667 1200055.7447 14204328.3646 9326714.9687
CXB1/ByJ m 10136446.6667 1200055.7447 12575253.3646 7697639.9687
CXB2/ByJ m 9314542.8333 1200055.7447 11753349.5313 6875736.1354
CXB3/ByJ m 9104704.5 1469762.1187 12091620.4957 6117788.5043
CXB4/ByJ m 11836975.5 1469762.1187 14823891.4957 8850059.5043
CXB6/ByJ m 5855169.3333 1200055.7447 8293976.0313 3416362.6354
CXB7/ByJ m 8991319.5 1469762.1187 11978235.4957 6004403.5043
CXB8/HiAJ m 12231930.0 1200055.7447 14670736.698 9793123.302
CXB9/HiAJ m 10874674.3333 1200055.7447 13313481.0313 8435867.6354
DBA/2J m 7511055.5 1039278.7608 9623124.0554 5398986.9446




  GWAS USING LINEAR MIXED MODELS