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Project measure / variable:   HMDPpheno8   pentadecanoate

ID, description, units MPD:50354   pentadecanoate   liver pentadecanoate (15:0) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver pentadecanoate (15:0) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means282321   None
Median of the strain means276699   None
SD of the strain means± 93520
Coefficient of variation (CV)0.331
Min–max range of strain means121929   –   647774   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 800478142404.002 38118006781.143 1.7233 0.0769
Residuals 34 752037673418.262 22118755100.5371


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 326993.0 0.0   1   0.0 0.0 326993.0, 326993.0 0.48
A/J m 308348.0 49667.0   2   35120.0 0.161 273229.0, 343468.0 0.28
AKR/J m 348429.0 0.0   1   0.0 0.0 348429.0, 348429.0 0.71
AXB10/PgnJ m 235430.0 0.0   1   0.0 0.0 235430.0, 235430.0 -0.5
AXB12/PgnJ m 229024.0 0.0   1   0.0 0.0 229024.0, 229024.0 -0.57
AXB13/PgnJ m 503226.0 0.0   1   0.0 0.0 503226.0, 503226.0 2.36
AXB15/PgnJ m 404662.0 0.0   1   0.0 0.0 404662.0, 404662.0 1.31
AXB19a/PgnJ m 170590.0 0.0   1   0.0 0.0 170590.0, 170590.0 -1.19
AXB19b/PgnJ m 175696.0 52436.0   2   37078.0 0.298 138618.0, 212774.0 -1.14
AXB19/PgnJ m 212954.0 0.0   1   0.0 0.0 212954.0, 212954.0 -0.74
AXB1/PgnJ m 240694.0 0.0   1   0.0 0.0 240694.0, 240694.0 -0.45
AXB23/PgnJ m 339180.0 0.0   1   0.0 0.0 339180.0, 339180.0 0.61
AXB24/PgnJ m 275460.0 98011.0   2   69304.0 0.356 206156.0, 344765.0 -0.07
AXB2/PgnJ m 369923.0 0.0   1   0.0 0.0 369923.0, 369923.0 0.94
AXB4/PgnJ m 138020.0 0.0   1   0.0 0.0 138020.0, 138020.0 -1.54
AXB5/PgnJ m 280059.0 0.0   1   0.0 0.0 280059.0, 280059.0 -0.02
AXB6/PgnJ m 233972.0 0.0   1   0.0 0.0 233972.0, 233972.0 -0.52
AXB8/PgnJ m 245075.0 0.0   1   0.0 0.0 245075.0, 245075.0 -0.4
BALB/cJ m 274195.0 43904.0   3 25348.0 0.16 236504.0, 322402.0 -0.09
BTBR T+ Itpr3tf/J m 166720.0 0.0   1   0.0 0.0 166720.0, 166720.0 -1.24
BUB/BnJ m 341352.0 0.0   1   0.0 0.0 341352.0, 341352.0 0.63
BXA11/PgnJ m 346855.0 0.0   1   0.0 0.0 346855.0, 346855.0 0.69
BXA12/PgnJ m 258956.0 0.0   1   0.0 0.0 258956.0, 258956.0 -0.25
BXA13/PgnJ m 166953.0 0.0   1   0.0 0.0 166953.0, 166953.0 -1.23
BXA14/PgnJ m 159280.0 0.0   1   0.0 0.0 159280.0, 159280.0 -1.32
BXA16/PgnJ m 229176.0 58049.0   2   41046.0 0.253 188129.0, 270222.0 -0.57
BXA1/PgnJ m 320470.0 0.0   1   0.0 0.0 320470.0, 320470.0 0.41
BXA24/PgnJ m 293320.0 0.0   1   0.0 0.0 293320.0, 293320.0 0.12
BXA25/PgnJ m 419300.0 0.0   1   0.0 0.0 419300.0, 419300.0 1.46
BXA26/PgnJ m 362526.0 0.0   1   0.0 0.0 362526.0, 362526.0 0.86
BXA2/PgnJ m 334158.0 0.0   1   0.0 0.0 334158.0, 334158.0 0.55
BXA4/PgnJ m 188216.0 0.0   1   0.0 0.0 188216.0, 188216.0 -1.01
BXA7/PgnJ m 376420.0 0.0   1   0.0 0.0 376420.0, 376420.0 1.01
BXA8/PgnJ m 314393.0 0.0   1   0.0 0.0 314393.0, 314393.0 0.34
BXD11/TyJ m 356100.0 0.0   1   0.0 0.0 356100.0, 356100.0 0.79
BXD12/TyJ m 282786.0 0.0   1   0.0 0.0 282786.0, 282786.0 0.0
BXD13/TyJ m 266079.0 0.0   1   0.0 0.0 266079.0, 266079.0 -0.17
BXD14/TyJ m 198923.0 0.0   1   0.0 0.0 198923.0, 198923.0 -0.89
BXD15/TyJ m 291291.0 0.0   1   0.0 0.0 291291.0, 291291.0 0.1
BXD18/TyJ m 355778.0 0.0   1   0.0 0.0 355778.0, 355778.0 0.79
BXD19/TyJ m 343938.0 67643.0   2   47831.0 0.197 296107.0, 391769.0 0.66
BXD1/TyJ m 162934.0 0.0   1   0.0 0.0 162934.0, 162934.0 -1.28
BXD20/TyJ m 336598.0 0.0   1   0.0 0.0 336598.0, 336598.0 0.58
BXD21/TyJ m 241869.0 0.0   1   0.0 0.0 241869.0, 241869.0 -0.43
BXD22/TyJ m 232364.0 0.0   1   0.0 0.0 232364.0, 232364.0 -0.53
BXD24/TyJ m 336397.0 0.0   1   0.0 0.0 336397.0, 336397.0 0.58
BXD24/TyJ-Cep290rd16/J m 200263.0 0.0   1   0.0 0.0 200263.0, 200263.0 -0.88
BXD28/TyJ m 240746.0 53911.0   2   38120.0 0.224 202625.0, 278866.0 -0.44
BXD29-Tlr4lps-2J/J m 275872.0 0.0   1   0.0 0.0 275872.0, 275872.0 -0.07
BXD2/TyJ m 197512.0 0.0   1   0.0 0.0 197512.0, 197512.0 -0.91
BXD32/TyJ m 473515.0 0.0   1   0.0 0.0 473515.0, 473515.0 2.04
BXD33/TyJ m 137766.0 0.0   1   0.0 0.0 137766.0, 137766.0 -1.55
BXD34/TyJ m 299593.0 0.0   1   0.0 0.0 299593.0, 299593.0 0.18
BXD36/TyJ m 275335.0 0.0   1   0.0 0.0 275335.0, 275335.0 -0.07
BXD38/TyJ m 386847.0 0.0   1   0.0 0.0 386847.0, 386847.0 1.12
BXD39/TyJ m 232277.0 0.0   1   0.0 0.0 232277.0, 232277.0 -0.54
BXD40/TyJ m 340991.0 0.0   1   0.0 0.0 340991.0, 340991.0 0.63
BXD42/TyJ m 215755.0 0.0   1   0.0 0.0 215755.0, 215755.0 -0.71
BXD5/TyJ m 222375.0 0.0   1   0.0 0.0 222375.0, 222375.0 -0.64
BXD6/TyJ m 195788.0 0.0   1   0.0 0.0 195788.0, 195788.0 -0.93
BXD8/TyJ m 298824.0 0.0   1   0.0 0.0 298824.0, 298824.0 0.18
BXD9/TyJ m 265556.0 0.0   1   0.0 0.0 265556.0, 265556.0 -0.18
BXH10/TyJ m 121929.0 0.0   1   0.0 0.0 121929.0, 121929.0 -1.72
BXH19/TyJ m 147766.0 0.0   1   0.0 0.0 147766.0, 147766.0 -1.44
BXH20/KccJ m 327296.0 0.0   1   0.0 0.0 327296.0, 327296.0 0.48
BXH22/KccJ m 270215.0 0.0   1   0.0 0.0 270215.0, 270215.0 -0.13
BXH2/TyJ m 209964.0 0.0   1   0.0 0.0 209964.0, 209964.0 -0.77
BXH4/TyJ m 240244.0 10562.0   2   7468.0 0.044 232776.0, 247712.0 -0.45
BXH6/TyJ m 183032.0 0.0   1   0.0 0.0 183032.0, 183032.0 -1.06
BXH7/TyJ m 184582.0 0.0   1   0.0 0.0 184582.0, 184582.0 -1.05
BXH8/TyJ m 235771.0 0.0   1   0.0 0.0 235771.0, 235771.0 -0.5
BXH9/TyJ m 298736.0 0.0   1   0.0 0.0 298736.0, 298736.0 0.18
C3H/HeJ m 220107.0 77480.0   2   54787.0 0.352 165321.0, 274894.0 -0.67
C57BL/6J m 473078.0 172925.0   5 77335.0 0.366 341041.0, 769691.0 2.04
C57L/J m 283514.0 0.0   1   0.0 0.0 283514.0, 283514.0 0.01
C58/J m 131149.0 0.0   1   0.0 0.0 131149.0, 131149.0 -1.62
CAST/EiJ m 179334.0 0.0   1   0.0 0.0 179334.0, 179334.0 -1.1
CBA/J m 304990.0 0.0   1   0.0 0.0 304990.0, 304990.0 0.24
CE/J m 256440.0 0.0   1   0.0 0.0 256440.0, 256440.0 -0.28
CXB11/HiAJ m 307410.0 41528.0   2   29365.0 0.135 278045.0, 336775.0 0.27
CXB12/HiAJ m 586562.0 326514.0   2   230880.0 0.557 355682.0, 817442.0 3.25
CXB13/HiAJ m 309264.0 88825.0   3 51283.0 0.287 237157.0, 408486.0 0.29
CXB1/ByJ m 330041.0 50993.0   3 29441.0 0.155 276679.0, 378278.0 0.51
CXB2/ByJ m 467979.0 163740.0   3 94535.0 0.35 355456.0, 655825.0 1.99
CXB3/ByJ m 347318.0 95012.0   2   67183.0 0.274 280134.0, 414501.0 0.7
CXB4/ByJ m 221704.0 22410.0   2   15846.0 0.101 205858.0, 237550.0 -0.65
CXB6/ByJ m 446872.0 210857.0   3 121738.0 0.472 262371.0, 676710.0 1.76
CXB7/ByJ m 285960.0 26189.0   2   18518.0 0.0916 267442.0, 304479.0 0.04
CXB8/HiAJ m 277526.0 76113.0   3 43944.0 0.274 204790.0, 356618.0 -0.05
CXB9/HiAJ m 647774.0 379937.0   3 219357.0 0.587 315938.0, 1062219.0 3.91
DBA/2J m 307566.0 69320.0   4 34660.0 0.225 223974.0, 381303.0 0.27
FVB/NJ m 268430.0 0.0   1   0.0 0.0 268430.0, 268430.0 -0.15
I/LnJ m 183483.0 0.0   1   0.0 0.0 183483.0, 183483.0 -1.06
KK/HlJ m 303710.0 0.0   1   0.0 0.0 303710.0, 303710.0 0.23
LG/J m 207846.0 0.0   1   0.0 0.0 207846.0, 207846.0 -0.8
LP/J m 184413.0 0.0   1   0.0 0.0 184413.0, 184413.0 -1.05
MA/MyJ m 379775.0 0.0   1   0.0 0.0 379775.0, 379775.0 1.04
NOD/ShiLtJ m 408907.0 0.0   1   0.0 0.0 408907.0, 408907.0 1.35
NON/ShiLtJ m 284859.0 0.0   1   0.0 0.0 284859.0, 284859.0 0.03
NZW/LacJ m 288276.0 0.0   1   0.0 0.0 288276.0, 288276.0 0.06
PL/J m 298518.0 0.0   1   0.0 0.0 298518.0, 298518.0 0.17
RIIIS/J m 293127.0 0.0   1   0.0 0.0 293127.0, 293127.0 0.12
SEA/GnJ m 268886.0 0.0   1   0.0 0.0 268886.0, 268886.0 -0.14
SJL/J m 161596.0 0.0   1   0.0 0.0 161596.0, 161596.0 -1.29
SM/J m 325291.0 0.0   1   0.0 0.0 325291.0, 325291.0 0.46
SWR/J m 210693.0 0.0   1   0.0 0.0 210693.0, 210693.0 -0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 308348.4 105163.5752 522066.4983 94630.3017
AXB19b/PgnJ m 175696.15 105163.5752 389414.2483 0.0
AXB24/PgnJ m 275460.2 105163.5752 489178.2983 61742.1017
BALB/cJ m 274194.6667 85865.6996 448694.7632 99694.5701
BXA16/PgnJ m 229175.5 105163.5752 442893.5983 15457.4017
BXD19/TyJ m 343937.85 105163.5752 557655.9483 130219.7517
BXD28/TyJ m 240745.8 105163.5752 454463.8983 27027.7017
BXH4/TyJ m 240244.15 105163.5752 453962.2483 26526.0517
C3H/HeJ m 220107.35 105163.5752 433825.4483 6389.2517
C57BL/6J m 473078.4 66511.2849 608245.5936 337911.2064
CXB11/HiAJ m 307410.25 105163.5752 521128.3483 93692.1517
CXB12/HiAJ m 586561.9 105163.5752 800279.9983 372843.8017
CXB13/HiAJ m 309263.8667 85865.6996 483763.9632 134763.7701
CXB1/ByJ m 330040.5667 85865.6996 504540.6632 155540.4701
CXB2/ByJ m 467978.9333 85865.6996 642479.0299 293478.8368
CXB3/ByJ m 347317.85 105163.5752 561035.9483 133599.7517
CXB4/ByJ m 221704.1 105163.5752 435422.1983 7986.0017
CXB6/ByJ m 446871.8333 85865.6996 621371.9299 272371.7368
CXB7/ByJ m 285960.45 105163.5752 499678.5483 72242.3517
CXB8/HiAJ m 277526.4 85865.6996 452026.4965 103026.3035
CXB9/HiAJ m 647773.6667 85865.6996 822273.7632 473273.5701
DBA/2J m 307566.225 74361.8772 458687.7416 156444.7084




  GWAS USING LINEAR MIXED MODELS