Project measure / variable:   HMDPpheno8   HODE

ID, description, units MPD:50337   HODE   13-HODE + 9-HODE (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - 13-HODE + 9-HODE (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means2617395   None
Median of the strain means2528272   None
SD of the strain means± 957603
Coefficient of variation (CV)0.366
Min–max range of strain means228846   –   6183201   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 23182523635982.4 1103929696951.54 2.7244 0.0045
Residuals 34 13776784223826.3 405199535994.891


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 3960448.0 0.0   1   0.0 0.0 3960448.0, 3960448.0 1.4
A/J m 2756918.0 749868.0   2   530236.0 0.272 2226682.0, 3287155.0 0.15
AKR/J m 4132493.0 0.0   1   0.0 0.0 4132493.0, 4132493.0 1.58
AXB10/PgnJ m 2519898.0 0.0   1   0.0 0.0 2519898.0, 2519898.0 -0.1
AXB12/PgnJ m 2483970.0 0.0   1   0.0 0.0 2483970.0, 2483970.0 -0.14
AXB13/PgnJ m 2222106.0 0.0   1   0.0 0.0 2222106.0, 2222106.0 -0.41
AXB15/PgnJ m 2754438.0 0.0   1   0.0 0.0 2754438.0, 2754438.0 0.14
AXB19a/PgnJ m 1488482.0 0.0   1   0.0 0.0 1488482.0, 1488482.0 -1.18
AXB19b/PgnJ m 810979.0 136550.0   2   96555.0 0.168 714424.0, 907534.0 -1.89
AXB19/PgnJ m 1351885.0 0.0   1   0.0 0.0 1351885.0, 1351885.0 -1.32
AXB1/PgnJ m 614049.0 0.0   1   0.0 0.0 614049.0, 614049.0 -2.09
AXB23/PgnJ m 3710696.0 0.0   1   0.0 0.0 3710696.0, 3710696.0 1.14
AXB24/PgnJ m 3230416.0 1527129.0   2   1079843.0 0.473 2150573.0, 4310259.0 0.64
AXB2/PgnJ m 2890680.0 0.0   1   0.0 0.0 2890680.0, 2890680.0 0.29
AXB4/PgnJ m 1700954.0 0.0   1   0.0 0.0 1700954.0, 1700954.0 -0.96
AXB5/PgnJ m 2796687.0 0.0   1   0.0 0.0 2796687.0, 2796687.0 0.19
AXB6/PgnJ m 1653100.0 0.0   1   0.0 0.0 1653100.0, 1653100.0 -1.01
AXB8/PgnJ m 2467440.0 0.0   1   0.0 0.0 2467440.0, 2467440.0 -0.16
BALB/cJ m 3024363.0 322176.0   3 186008.0 0.107 2770210.0, 3386709.0 0.42
BTBR T+ Itpr3tf/J m 2663886.0 0.0   1   0.0 0.0 2663886.0, 2663886.0 0.05
BUB/BnJ m 3113439.0 0.0   1   0.0 0.0 3113439.0, 3113439.0 0.52
BXA11/PgnJ m 2531083.0 0.0   1   0.0 0.0 2531083.0, 2531083.0 -0.09
BXA12/PgnJ m 2154429.0 0.0   1   0.0 0.0 2154429.0, 2154429.0 -0.48
BXA13/PgnJ m 1356499.0 0.0   1   0.0 0.0 1356499.0, 1356499.0 -1.32
BXA14/PgnJ m 425675.0 0.0   1   0.0 0.0 425675.0, 425675.0 -2.29
BXA16/PgnJ m 3321558.0 325186.0   2   229941.0 0.0979 3091616.0, 3551499.0 0.74
BXA1/PgnJ m 2735931.0 0.0   1   0.0 0.0 2735931.0, 2735931.0 0.12
BXA24/PgnJ m 1989321.0 0.0   1   0.0 0.0 1989321.0, 1989321.0 -0.66
BXA25/PgnJ m 3198989.0 0.0   1   0.0 0.0 3198989.0, 3198989.0 0.61
BXA26/PgnJ m 2153722.0 0.0   1   0.0 0.0 2153722.0, 2153722.0 -0.48
BXA2/PgnJ m 2374237.0 0.0   1   0.0 0.0 2374237.0, 2374237.0 -0.25
BXA4/PgnJ m 3163308.0 0.0   1   0.0 0.0 3163308.0, 3163308.0 0.57
BXA7/PgnJ m 2679261.0 0.0   1   0.0 0.0 2679261.0, 2679261.0 0.06
BXA8/PgnJ m 2140023.0 0.0   1   0.0 0.0 2140023.0, 2140023.0 -0.5
BXD11/TyJ m 3483897.0 0.0   1   0.0 0.0 3483897.0, 3483897.0 0.9
BXD12/TyJ m 1710440.0 0.0   1   0.0 0.0 1710440.0, 1710440.0 -0.95
BXD13/TyJ m 2525462.0 0.0   1   0.0 0.0 2525462.0, 2525462.0 -0.1
BXD14/TyJ m 1530007.0 0.0   1   0.0 0.0 1530007.0, 1530007.0 -1.14
BXD15/TyJ m 2699166.0 0.0   1   0.0 0.0 2699166.0, 2699166.0 0.09
BXD18/TyJ m 3420757.0 0.0   1   0.0 0.0 3420757.0, 3420757.0 0.84
BXD19/TyJ m 3016430.0 257433.0   2   182032.0 0.0853 2834398.0, 3198462.0 0.42
BXD1/TyJ m 1964675.0 0.0   1   0.0 0.0 1964675.0, 1964675.0 -0.68
BXD20/TyJ m 2201664.0 0.0   1   0.0 0.0 2201664.0, 2201664.0 -0.43
BXD21/TyJ m 2343545.0 0.0   1   0.0 0.0 2343545.0, 2343545.0 -0.29
BXD22/TyJ m 1834457.0 0.0   1   0.0 0.0 1834457.0, 1834457.0 -0.82
BXD24/TyJ m 2718706.0 0.0   1   0.0 0.0 2718706.0, 2718706.0 0.11
BXD24/TyJ-Cep290rd16/J m 2723816.0 0.0   1   0.0 0.0 2723816.0, 2723816.0 0.11
BXD28/TyJ m 2409590.0 27313.0   2   19313.0 0.0113 2390276.0, 2428903.0 -0.22
BXD29-Tlr4lps-2J/J m 1683999.0 0.0   1   0.0 0.0 1683999.0, 1683999.0 -0.97
BXD2/TyJ m 2819055.0 0.0   1   0.0 0.0 2819055.0, 2819055.0 0.21
BXD32/TyJ m 3967980.0 0.0   1   0.0 0.0 3967980.0, 3967980.0 1.41
BXD33/TyJ m 1365934.0 0.0   1   0.0 0.0 1365934.0, 1365934.0 -1.31
BXD34/TyJ m 2243552.0 0.0   1   0.0 0.0 2243552.0, 2243552.0 -0.39
BXD36/TyJ m 4563436.0 0.0   1   0.0 0.0 4563436.0, 4563436.0 2.03
BXD38/TyJ m 2937258.0 0.0   1   0.0 0.0 2937258.0, 2937258.0 0.33
BXD39/TyJ m 2358662.0 0.0   1   0.0 0.0 2358662.0, 2358662.0 -0.27
BXD40/TyJ m 4036844.0 0.0   1   0.0 0.0 4036844.0, 4036844.0 1.48
BXD42/TyJ m 2407560.0 0.0   1   0.0 0.0 2407560.0, 2407560.0 -0.22
BXD5/TyJ m 1782750.0 0.0   1   0.0 0.0 1782750.0, 1782750.0 -0.87
BXD6/TyJ m 3765009.0 0.0   1   0.0 0.0 3765009.0, 3765009.0 1.2
BXD8/TyJ m 6183201.0 0.0   1   0.0 0.0 6183201.0, 6183201.0 3.72
BXD9/TyJ m 3090392.0 0.0   1   0.0 0.0 3090392.0, 3090392.0 0.49
BXH10/TyJ m 1585329.0 0.0   1   0.0 0.0 1585329.0, 1585329.0 -1.08
BXH19/TyJ m 2521511.0 0.0   1   0.0 0.0 2521511.0, 2521511.0 -0.1
BXH20/KccJ m 3299461.0 0.0   1   0.0 0.0 3299461.0, 3299461.0 0.71
BXH22/KccJ m 2976909.0 0.0   1   0.0 0.0 2976909.0, 2976909.0 0.38
BXH2/TyJ m 1785691.0 0.0   1   0.0 0.0 1785691.0, 1785691.0 -0.87
BXH4/TyJ m 2109107.0 408586.0   2   288914.0 0.194 1820193.0, 2398021.0 -0.53
BXH6/TyJ m 2086304.0 0.0   1   0.0 0.0 2086304.0, 2086304.0 -0.55
BXH7/TyJ m 1925975.0 0.0   1   0.0 0.0 1925975.0, 1925975.0 -0.72
BXH8/TyJ m 2267038.0 0.0   1   0.0 0.0 2267038.0, 2267038.0 -0.37
BXH9/TyJ m 4552241.0 0.0   1   0.0 0.0 4552241.0, 4552241.0 2.02
C3H/HeJ m 2142473.0 184495.0   2   130457.0 0.0861 2012015.0, 2272930.0 -0.5
C57BL/6J m 2374383.0 419489.0   5 187601.0 0.177 1824724.0, 2944496.0 -0.25
C57L/J m 3023676.0 0.0   1   0.0 0.0 3023676.0, 3023676.0 0.42
C58/J m 228846.0 0.0   1   0.0 0.0 228846.0, 228846.0 -2.49
CAST/EiJ m 973911.0 0.0   1   0.0 0.0 973911.0, 973911.0 -1.72
CBA/J m 2938061.0 0.0   1   0.0 0.0 2938061.0, 2938061.0 0.33
CE/J m 3432806.0 0.0   1   0.0 0.0 3432806.0, 3432806.0 0.85
CXB11/HiAJ m 2708143.0 1046838.0   2   740226.0 0.387 1967917.0, 3448370.0 0.09
CXB12/HiAJ m 4578544.0 508617.0   2   359646.0 0.111 4218898.0, 4938191.0 2.05
CXB13/HiAJ m 2723268.0 1126042.0   3 650120.0 0.413 1429242.0, 3480252.0 0.11
CXB1/ByJ m 2087100.0 1094027.0   3 631637.0 0.524 847384.0, 2917252.0 -0.55
CXB2/ByJ m 2994425.0 606513.0   3 350170.0 0.203 2622347.0, 3694299.0 0.39
CXB3/ByJ m 3221472.0 160953.0   2   113811.0 0.05 3107661.0, 3335283.0 0.63
CXB4/ByJ m 2422169.0 82199.0   2   58124.0 0.0339 2364045.0, 2480292.0 -0.2
CXB6/ByJ m 3116477.0 394978.0   3 228041.0 0.127 2692362.0, 3473802.0 0.52
CXB7/ByJ m 2239387.0 416406.0   2   294444.0 0.186 1944943.0, 2533831.0 -0.39
CXB8/HiAJ m 1994108.0 143574.0   3 82893.0 0.072 1854265.0, 2141143.0 -0.65
CXB9/HiAJ m 2834093.0 370090.0   3 213672.0 0.131 2605976.0, 3261103.0 0.23
DBA/2J m 3068200.0 758343.0   4 379172.0 0.247 2227813.0, 4027952.0 0.47
FVB/NJ m 3046103.0 0.0   1   0.0 0.0 3046103.0, 3046103.0 0.45
I/LnJ m 1353607.0 0.0   1   0.0 0.0 1353607.0, 1353607.0 -1.32
KK/HlJ m 2386745.0 0.0   1   0.0 0.0 2386745.0, 2386745.0 -0.24
LG/J m 1534888.0 0.0   1   0.0 0.0 1534888.0, 1534888.0 -1.13
LP/J m 2215581.0 0.0   1   0.0 0.0 2215581.0, 2215581.0 -0.42
MA/MyJ m 4604639.0 0.0   1   0.0 0.0 4604639.0, 4604639.0 2.08
NOD/ShiLtJ m 4149247.0 0.0   1   0.0 0.0 4149247.0, 4149247.0 1.6
NON/ShiLtJ m 3856294.0 0.0   1   0.0 0.0 3856294.0, 3856294.0 1.29
NZW/LacJ m 2568808.0 0.0   1   0.0 0.0 2568808.0, 2568808.0 -0.05
PL/J m 3261875.0 0.0   1   0.0 0.0 3261875.0, 3261875.0 0.67
RIIIS/J m 4234095.0 0.0   1   0.0 0.0 4234095.0, 4234095.0 1.69
SEA/GnJ m 2172239.0 0.0   1   0.0 0.0 2172239.0, 2172239.0 -0.46
SJL/J m 2182865.0 0.0   1   0.0 0.0 2182865.0, 2182865.0 -0.45
SM/J m 1673626.0 0.0   1   0.0 0.0 1673626.0, 1673626.0 -0.99
SWR/J m 3632576.0 0.0   1   0.0 0.0 3632576.0, 3632576.0 1.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 2756918.3 450110.8397 3671653.5825 1842183.0175
AXB19b/PgnJ m 810979.0 450110.8397 1725714.2825 0.0
AXB24/PgnJ m 3230416.0 450110.8397 4145151.2825 2315680.7175
BALB/cJ m 3024362.7667 367513.9616 3771240.9973 2277484.536
BXA16/PgnJ m 3321557.75 450110.8397 4236293.0325 2406822.4675
BXD19/TyJ m 3016430.0 450110.8397 3931165.2825 2101694.7175
BXD28/TyJ m 2409589.75 450110.8397 3324325.0325 1494854.4675
BXH4/TyJ m 2109107.0 450110.8397 3023842.2825 1194371.7175
C3H/HeJ m 2142472.85 450110.8397 3057208.1325 1227737.5675
C57BL/6J m 2374382.78 284675.0906 2952912.1698 1795853.3902
CXB11/HiAJ m 2708143.4 450110.8397 3622878.6825 1793408.1175
CXB12/HiAJ m 4578544.5 450110.8397 5493279.7825 3663809.2175
CXB13/HiAJ m 2723267.6333 367513.9616 3470145.864 1976389.4027
CXB1/ByJ m 2087099.9333 367513.9616 2833978.164 1340221.7027
CXB2/ByJ m 2994424.8 367513.9616 3741303.0306 2247546.5694
CXB3/ByJ m 3221472.15 450110.8397 4136207.4325 2306736.8675
CXB4/ByJ m 2422168.8 450110.8397 3336904.0825 1507433.5175
CXB6/ByJ m 3116476.8333 367513.9616 3863355.064 2369598.6027
CXB7/ByJ m 2239387.05 450110.8397 3154122.3325 1324651.7675
CXB8/HiAJ m 1994108.0 367513.9616 2740986.2306 1247229.7694
CXB9/HiAJ m 2834092.6333 367513.9616 3580970.864 2087214.4027
DBA/2J m 3068199.725 318276.427 3715015.2463 2421384.2037




  GWAS USING LINEAR MIXED MODELS