Project measure / variable:   HMDPpheno8   dodecanedioate

ID, description, units MPD:50332   dodecanedioate   dodecanedioate (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   103 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - dodecanedioate (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested103 strains
Mean of the strain means12561   None
Median of the strain means12682   None
SD of the strain means± 4241
Coefficient of variation (CV)0.338
Min–max range of strain means3966   –   21531   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 388964338.9897 20471807.3152 1.1678 0.3401
Residuals 32 560989124.177 17530910.1305


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 15770.0 0.0   1   0.0 0.0 15770.0, 15770.0 0.76
A/J m 10437.0 3858.0   2   2728.0 0.37 7709.0, 13165.0 -0.5
AKR/J m 17224.0 0.0   1   0.0 0.0 17224.0, 17224.0 1.1
AXB10/PgnJ m 9775.0 0.0   1   0.0 0.0 9775.0, 9775.0 -0.66
AXB12/PgnJ m 16336.0 0.0   1   0.0 0.0 16336.0, 16336.0 0.89
AXB13/PgnJ m 21531.0 0.0   1   0.0 0.0 21531.0, 21531.0 2.11
AXB15/PgnJ m 5838.0 0.0   1   0.0 0.0 5838.0, 5838.0 -1.59
AXB19a/PgnJ m 13054.0 0.0   1   0.0 0.0 13054.0, 13054.0 0.12
AXB19b/PgnJ m 9140.0 7449.0   2   5267.0 0.815 3873.0, 14408.0 -0.81
AXB19/PgnJ m 8523.0 0.0   1   0.0 0.0 8523.0, 8523.0 -0.95
AXB1/PgnJ m 18504.0 0.0   1   0.0 0.0 18504.0, 18504.0 1.4
AXB23/PgnJ m 16833.0 0.0   1   0.0 0.0 16833.0, 16833.0 1.01
AXB24/PgnJ m 12248.0 4286.0   2   3031.0 0.35 9217.0, 15278.0 -0.07
AXB2/PgnJ m 17690.0 0.0   1   0.0 0.0 17690.0, 17690.0 1.21
AXB4/PgnJ m 14875.0 0.0   1   0.0 0.0 14875.0, 14875.0 0.55
AXB5/PgnJ m 11715.0 0.0   1   0.0 0.0 11715.0, 11715.0 -0.2
AXB6/PgnJ m 15918.0 0.0   1   0.0 0.0 15918.0, 15918.0 0.79
AXB8/PgnJ m 16150.0 0.0   1   0.0 0.0 16150.0, 16150.0 0.85
BALB/cJ m 13457.0 4535.0   3 2618.0 0.337 8479.0, 17354.0 0.21
BTBR T+ Itpr3tf/J m 21003.0 0.0   1   0.0 0.0 21003.0, 21003.0 1.99
BUB/BnJ m 10601.0 0.0   1   0.0 0.0 10601.0, 10601.0 -0.46
BXA11/PgnJ m 8443.0 0.0   1   0.0 0.0 8443.0, 8443.0 -0.97
BXA12/PgnJ m 16375.0 0.0   1   0.0 0.0 16375.0, 16375.0 0.9
BXA13/PgnJ m 10531.0 0.0   1   0.0 0.0 10531.0, 10531.0 -0.48
BXA14/PgnJ m 8519.0 0.0   1   0.0 0.0 8519.0, 8519.0 -0.95
BXA16/PgnJ m 8890.0 1645.0   2   1163.0 0.185 7726.0, 10053.0 -0.87
BXA1/PgnJ m 5807.0 0.0   1   0.0 0.0 5807.0, 5807.0 -1.59
BXA24/PgnJ m 13605.0 0.0   1   0.0 0.0 13605.0, 13605.0 0.25
BXA25/PgnJ m 17288.0 0.0   1   0.0 0.0 17288.0, 17288.0 1.11
BXA26/PgnJ m 11840.0 0.0   1   0.0 0.0 11840.0, 11840.0 -0.17
BXA2/PgnJ m 9566.0 0.0   1   0.0 0.0 9566.0, 9566.0 -0.71
BXA4/PgnJ m 15922.0 0.0   1   0.0 0.0 15922.0, 15922.0 0.79
BXA7/PgnJ m 17732.0 0.0   1   0.0 0.0 17732.0, 17732.0 1.22
BXA8/PgnJ m 10929.0 0.0   1   0.0 0.0 10929.0, 10929.0 -0.38
BXD11/TyJ m 14475.0 0.0   1   0.0 0.0 14475.0, 14475.0 0.45
BXD12/TyJ m 19608.0 0.0   1   0.0 0.0 19608.0, 19608.0 1.66
BXD13/TyJ m 12699.0 0.0   1   0.0 0.0 12699.0, 12699.0 0.03
BXD14/TyJ m 9904.0 0.0   1   0.0 0.0 9904.0, 9904.0 -0.63
BXD15/TyJ m 7642.0 0.0   1   0.0 0.0 7642.0, 7642.0 -1.16
BXD18/TyJ m 12813.0 0.0   1   0.0 0.0 12813.0, 12813.0 0.06
BXD19/TyJ m 8884.0 741.0   2   524.0 0.0835 8360.0, 9409.0 -0.87
BXD1/TyJ m 5422.0 0.0   1   0.0 0.0 5422.0, 5422.0 -1.68
BXD20/TyJ m 9860.0 0.0   1   0.0 0.0 9860.0, 9860.0 -0.64
BXD21/TyJ m 10405.0 0.0   1   0.0 0.0 10405.0, 10405.0 -0.51
BXD22/TyJ m 8890.0 0.0   1   0.0 0.0 8890.0, 8890.0 -0.87
BXD24/TyJ m 15862.0 0.0   1   0.0 0.0 15862.0, 15862.0 0.78
BXD24/TyJ-Cep290rd16/J m 7426.0 0.0   1   0.0 0.0 7426.0, 7426.0 -1.21
BXD28/TyJ m 15142.0 903.0   2   639.0 0.0597 14503.0, 15781.0 0.61
BXD29-Tlr4lps-2J/J m 14478.0 0.0   1   0.0 0.0 14478.0, 14478.0 0.45
BXD2/TyJ m 10356.0 0.0   1   0.0 0.0 10356.0, 10356.0 -0.52
BXD32/TyJ m 10816.0 0.0   1   0.0 0.0 10816.0, 10816.0 -0.41
BXD33/TyJ m 18552.0 0.0   1   0.0 0.0 18552.0, 18552.0 1.41
BXD34/TyJ m 16549.0 0.0   1   0.0 0.0 16549.0, 16549.0 0.94
BXD36/TyJ m 4429.0 0.0   1   0.0 0.0 4429.0, 4429.0 -1.92
BXD38/TyJ m 13872.0 0.0   1   0.0 0.0 13872.0, 13872.0 0.31
BXD39/TyJ m 4845.0 0.0   1   0.0 0.0 4845.0, 4845.0 -1.82
BXD42/TyJ m 8902.0 0.0   1   0.0 0.0 8902.0, 8902.0 -0.86
BXD5/TyJ m 4046.0 0.0   1   0.0 0.0 4046.0, 4046.0 -2.01
BXD6/TyJ m 17748.0 0.0   1   0.0 0.0 17748.0, 17748.0 1.22
BXD8/TyJ m 12992.0 0.0   1   0.0 0.0 12992.0, 12992.0 0.1
BXD9/TyJ m 12809.0 0.0   1   0.0 0.0 12809.0, 12809.0 0.06
BXH10/TyJ m 8342.0 0.0   1   0.0 0.0 8342.0, 8342.0 -0.99
BXH19/TyJ m 6672.0 0.0   1   0.0 0.0 6672.0, 6672.0 -1.39
BXH20/KccJ m 6383.0 0.0   1   0.0 0.0 6383.0, 6383.0 -1.46
BXH22/KccJ m 19791.0 0.0   1   0.0 0.0 19791.0, 19791.0 1.7
BXH2/TyJ m 14201.0 0.0   1   0.0 0.0 14201.0, 14201.0 0.39
BXH4/TyJ m 11756.0 1175.0   2   831.0 0.0999 10925.0, 12587.0 -0.19
BXH6/TyJ m 18802.0 0.0   1   0.0 0.0 18802.0, 18802.0 1.47
BXH7/TyJ m 13172.0 0.0   1   0.0 0.0 13172.0, 13172.0 0.14
BXH8/TyJ m 14015.0 0.0   1   0.0 0.0 14015.0, 14015.0 0.34
BXH9/TyJ m 10630.0 0.0   1   0.0 0.0 10630.0, 10630.0 -0.46
C3H/HeJ m 17289.0 9307.0   2   6581.0 0.538 10708.0, 23870.0 1.11
C57BL/6J m 13653.0 3953.0   5 1768.0 0.29 9769.0, 17978.0 0.26
C57L/J m 12497.0 0.0   1   0.0 0.0 12497.0, 12497.0 -0.02
C58/J m 13509.0 0.0   1   0.0 0.0 13509.0, 13509.0 0.22
CAST/EiJ m 18026.0 0.0   1   0.0 0.0 18026.0, 18026.0 1.29
CBA/J m 18575.0 0.0   1   0.0 0.0 18575.0, 18575.0 1.42
CE/J m 16391.0 0.0   1   0.0 0.0 16391.0, 16391.0 0.9
CXB11/HiAJ m 19014.0 2822.0   2   1995.0 0.148 17019.0, 21009.0 1.52
CXB12/HiAJ m 19706.0 1011.0   2   715.0 0.0513 18991.0, 20421.0 1.68
CXB13/HiAJ m 13780.0 6177.0   3 3566.0 0.448 8935.0, 20736.0 0.29
CXB1/ByJ m 14769.0 1866.0   3 1078.0 0.126 12626.0, 16038.0 0.52
CXB2/ByJ m 11515.0 5655.0   3 3265.0 0.491 5424.0, 16598.0 -0.25
CXB3/ByJ m 8826.0 0.0   1   0.0 0.0 8826.0, 8826.0 -0.88
CXB4/ByJ m 10181.0 3294.0   2   2330.0 0.324 7852.0, 12511.0 -0.56
CXB6/ByJ m 12249.0 4420.0   3 2552.0 0.361 8267.0, 17005.0 -0.07
CXB8/HiAJ m 14863.0 2846.0   3 1643.0 0.191 11961.0, 17649.0 0.54
CXB9/HiAJ m 15327.0 4136.0   3 2388.0 0.27 10642.0, 18475.0 0.65
DBA/2J m 14787.0 2581.0   4 1291.0 0.175 12314.0, 17516.0 0.52
FVB/NJ m 9842.0 0.0   1   0.0 0.0 9842.0, 9842.0 -0.64
I/LnJ m 12198.0 0.0   1   0.0 0.0 12198.0, 12198.0 -0.09
KK/HlJ m 10749.0 0.0   1   0.0 0.0 10749.0, 10749.0 -0.43
LG/J m 5906.0 0.0   1   0.0 0.0 5906.0, 5906.0 -1.57
LP/J m 12662.0 0.0   1   0.0 0.0 12662.0, 12662.0 0.02
MA/MyJ m 7647.0 0.0   1   0.0 0.0 7647.0, 7647.0 -1.16
NOD/ShiLtJ m 12682.0 0.0   1   0.0 0.0 12682.0, 12682.0 0.03
NON/ShiLtJ m 9022.0 0.0   1   0.0 0.0 9022.0, 9022.0 -0.83
NZW/LacJ m 14076.0 0.0   1   0.0 0.0 14076.0, 14076.0 0.36
PL/J m 7890.0 0.0   1   0.0 0.0 7890.0, 7890.0 -1.1
RIIIS/J m 4964.0 0.0   1   0.0 0.0 4964.0, 4964.0 -1.79
SEA/GnJ m 3966.0 0.0   1   0.0 0.0 3966.0, 3966.0 -2.03
SM/J m 19442.0 0.0   1   0.0 0.0 19442.0, 19442.0 1.62
SWR/J m 12515.0 0.0   1   0.0 0.0 12515.0, 12515.0 -0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 10437.2 2960.6511 16467.849 4406.551
AXB19b/PgnJ m 9140.3 2960.6511 15170.949 3109.651
AXB24/PgnJ m 12247.5 2960.6511 18278.149 6216.851
BALB/cJ m 13456.9333 2417.3615 18380.9376 8532.9291
BXA16/PgnJ m 8889.6 2960.6511 14920.249 2858.951
BXD19/TyJ m 8884.35 2960.6511 14914.999 2853.701
BXD28/TyJ m 15142.25 2960.6511 21172.899 9111.601
BXH4/TyJ m 11755.95 2960.6511 17786.599 5725.301
C3H/HeJ m 17288.55 2960.6511 23319.199 11257.901
C57BL/6J m 13652.54 1872.4802 17466.6573 9838.4227
CXB11/HiAJ m 19014.05 2960.6511 25044.699 12983.401
CXB12/HiAJ m 19706.1 2960.6511 25736.749 13675.451
CXB13/HiAJ m 13780.3333 2417.3615 18704.3376 8856.3291
CXB1/ByJ m 14768.7333 2417.3615 19692.7376 9844.7291
CXB2/ByJ m 11514.7333 2417.3615 16438.7376 6590.7291
CXB4/ByJ m 10181.3 2960.6511 16211.949 4150.651
CXB6/ByJ m 12249.3667 2417.3615 17173.3709 7325.3624
CXB8/HiAJ m 14863.0 2417.3615 19787.0043 9938.9957
CXB9/HiAJ m 15326.9333 2417.3615 20250.9376 10402.9291
DBA/2J m 14786.9 2093.4965 19051.2128 10522.5872




  GWAS USING LINEAR MIXED MODELS