Project measure / variable:   HMDPpheno6   GSH

ID, description, units MPD:50122   GSH   liver glutathione, reduced (GSH) (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   104 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver glutathione, reduced (GSH) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested104 strains
Mean of the strain means254926   None
Median of the strain means219679   None
SD of the strain means± 166916
Coefficient of variation (CV)0.655
Min–max range of strain means73382   –   1327488   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 443062905540.02 21098233597.1438 2.9803 0.0023
Residuals 34 240693087468.675 7079208454.961


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 313275.0 0.0   1   0.0 0.0 313275.0, 313275.0 0.35
A/J m 114242.0 6285.0   2   4444.0 0.055 109798.0, 118686.0 -0.84
AKR/J m 109374.0 0.0   1   0.0 0.0 109374.0, 109374.0 -0.87
AXB10/PgnJ m 223882.0 0.0   1   0.0 0.0 223882.0, 223882.0 -0.19
AXB12/PgnJ m 113205.0 0.0   1   0.0 0.0 113205.0, 113205.0 -0.85
AXB13/PgnJ m 140023.0 0.0   1   0.0 0.0 140023.0, 140023.0 -0.69
AXB15/PgnJ m 164702.0 0.0   1   0.0 0.0 164702.0, 164702.0 -0.54
AXB19a/PgnJ m 206709.0 0.0   1   0.0 0.0 206709.0, 206709.0 -0.29
AXB19b/PgnJ m 413900.0 49107.0   2   34724.0 0.119 379177.0, 448624.0 0.95
AXB19/PgnJ m 323492.0 0.0   1   0.0 0.0 323492.0, 323492.0 0.41
AXB1/PgnJ m 460663.0 0.0   1   0.0 0.0 460663.0, 460663.0 1.23
AXB23/PgnJ m 167964.0 0.0   1   0.0 0.0 167964.0, 167964.0 -0.52
AXB24/PgnJ m 122919.0 61200.0   2   43275.0 0.498 79644.0, 166194.0 -0.79
AXB2/PgnJ m 115123.0 0.0   1   0.0 0.0 115123.0, 115123.0 -0.84
AXB4/PgnJ m 248946.0 0.0   1   0.0 0.0 248946.0, 248946.0 -0.04
AXB5/PgnJ m 316001.0 0.0   1   0.0 0.0 316001.0, 316001.0 0.37
AXB6/PgnJ m 948459.0 0.0   1   0.0 0.0 948459.0, 948459.0 4.15
AXB8/PgnJ m 105821.0 0.0   1   0.0 0.0 105821.0, 105821.0 -0.89
BALB/cJ m 177279.0 52342.0   3 30220.0 0.295 128655.0, 232679.0 -0.47
BTBR T+ Itpr3tf/J m 322695.0 0.0   1   0.0 0.0 322695.0, 322695.0 0.41
BUB/BnJ m 141422.0 0.0   1   0.0 0.0 141422.0, 141422.0 -0.68
BXA12/PgnJ m 204871.0 0.0   1   0.0 0.0 204871.0, 204871.0 -0.3
BXA13/PgnJ m 294299.0 0.0   1   0.0 0.0 294299.0, 294299.0 0.24
BXA14/PgnJ m 312394.0 0.0   1   0.0 0.0 312394.0, 312394.0 0.34
BXA16/PgnJ m 285339.0 103369.0   2   73093.0 0.362 212246.0, 358432.0 0.18
BXA1/PgnJ m 169530.0 0.0   1   0.0 0.0 169530.0, 169530.0 -0.51
BXA24/PgnJ m 234913.0 0.0   1   0.0 0.0 234913.0, 234913.0 -0.12
BXA25/PgnJ m 180401.0 0.0   1   0.0 0.0 180401.0, 180401.0 -0.45
BXA26/PgnJ m 194120.0 0.0   1   0.0 0.0 194120.0, 194120.0 -0.36
BXA2/PgnJ m 180015.0 0.0   1   0.0 0.0 180015.0, 180015.0 -0.45
BXA4/PgnJ m 100469.0 0.0   1   0.0 0.0 100469.0, 100469.0 -0.93
BXA7/PgnJ m 176661.0 0.0   1   0.0 0.0 176661.0, 176661.0 -0.47
BXA8/PgnJ m 135740.0 0.0   1   0.0 0.0 135740.0, 135740.0 -0.71
BXD11/TyJ m 126871.0 0.0   1   0.0 0.0 126871.0, 126871.0 -0.77
BXD12/TyJ m 432855.0 0.0   1   0.0 0.0 432855.0, 432855.0 1.07
BXD13/TyJ m 99506.0 0.0   1   0.0 0.0 99506.0, 99506.0 -0.93
BXD14/TyJ m 328803.0 0.0   1   0.0 0.0 328803.0, 328803.0 0.44
BXD15/TyJ m 224207.0 0.0   1   0.0 0.0 224207.0, 224207.0 -0.18
BXD18/TyJ m 276441.0 0.0   1   0.0 0.0 276441.0, 276441.0 0.13
BXD19/TyJ m 354337.0 8787.0   2   6214.0 0.0248 348124.0, 360551.0 0.6
BXD1/TyJ m 479950.0 0.0   1   0.0 0.0 479950.0, 479950.0 1.35
BXD20/TyJ m 541668.0 0.0   1   0.0 0.0 541668.0, 541668.0 1.72
BXD21/TyJ m 348318.0 0.0   1   0.0 0.0 348318.0, 348318.0 0.56
BXD22/TyJ m 308891.0 0.0   1   0.0 0.0 308891.0, 308891.0 0.32
BXD24/TyJ m 241969.0 0.0   1   0.0 0.0 241969.0, 241969.0 -0.08
BXD24/TyJ-Cep290rd16/J m 211884.0 0.0   1   0.0 0.0 211884.0, 211884.0 -0.26
BXD28/TyJ m 161588.0 17449.0   2   12339.0 0.108 149250.0, 173927.0 -0.56
BXD29-Tlr4lps-2J/J m 386395.0 0.0   1   0.0 0.0 386395.0, 386395.0 0.79
BXD2/TyJ m 277334.0 0.0   1   0.0 0.0 277334.0, 277334.0 0.13
BXD32/TyJ m 149412.0 0.0   1   0.0 0.0 149412.0, 149412.0 -0.63
BXD33/TyJ m 429423.0 0.0   1   0.0 0.0 429423.0, 429423.0 1.05
BXD34/TyJ m 273753.0 0.0   1   0.0 0.0 273753.0, 273753.0 0.11
BXD36/TyJ m 338654.0 0.0   1   0.0 0.0 338654.0, 338654.0 0.5
BXD38/TyJ m 194413.0 0.0   1   0.0 0.0 194413.0, 194413.0 -0.36
BXD39/TyJ m 143582.0 0.0   1   0.0 0.0 143582.0, 143582.0 -0.67
BXD40/TyJ m 229473.0 0.0   1   0.0 0.0 229473.0, 229473.0 -0.15
BXD42/TyJ m 285439.0 0.0   1   0.0 0.0 285439.0, 285439.0 0.18
BXD5/TyJ m 221936.0 0.0   1   0.0 0.0 221936.0, 221936.0 -0.2
BXD6/TyJ m 202194.0 0.0   1   0.0 0.0 202194.0, 202194.0 -0.32
BXD8/TyJ m 153808.0 0.0   1   0.0 0.0 153808.0, 153808.0 -0.61
BXD9/TyJ m 301832.0 0.0   1   0.0 0.0 301832.0, 301832.0 0.28
BXH10/TyJ m 291110.0 0.0   1   0.0 0.0 291110.0, 291110.0 0.22
BXH20/KccJ m 273860.0 0.0   1   0.0 0.0 273860.0, 273860.0 0.11
BXH22/KccJ m 228413.0 0.0   1   0.0 0.0 228413.0, 228413.0 -0.16
BXH2/TyJ m 327456.0 0.0   1   0.0 0.0 327456.0, 327456.0 0.43
BXH4/TyJ m 271820.0 98113.0   2   69376.0 0.361 202444.0, 341196.0 0.1
BXH6/TyJ m 217422.0 0.0   1   0.0 0.0 217422.0, 217422.0 -0.22
BXH7/TyJ m 349438.0 0.0   1   0.0 0.0 349438.0, 349438.0 0.57
BXH8/TyJ m 99855.0 0.0   1   0.0 0.0 99855.0, 99855.0 -0.93
BXH9/TyJ m 85157.0 0.0   1   0.0 0.0 85157.0, 85157.0 -1.02
C3H/HeJ m 198148.0 53333.0   2   37712.0 0.269 160436.0, 235860.0 -0.34
C57BL/6J m 137397.0 10790.0   5 4826.0 0.0785 127981.0, 151174.0 -0.7
C57L/J m 179642.0 0.0   1   0.0 0.0 179642.0, 179642.0 -0.45
C58/J m 621024.0 0.0   1   0.0 0.0 621024.0, 621024.0 2.19
CAST/EiJ m 481177.0 0.0   1   0.0 0.0 481177.0, 481177.0 1.36
CBA/J m 185657.0 0.0   1   0.0 0.0 185657.0, 185657.0 -0.41
CE/J m 298207.0 0.0   1   0.0 0.0 298207.0, 298207.0 0.26
CXB11/HiAJ m 213568.0 200820.0   2   142001.0 0.94 71567.0, 355568.0 -0.25
CXB12/HiAJ m 132642.0 11717.0   2   8285.0 0.0883 124356.0, 140927.0 -0.73
CXB13/HiAJ m 228830.0 142901.0   3 82504.0 0.624 144406.0, 393823.0 -0.16
CXB1/ByJ m 157238.0 55934.0   3 32294.0 0.356 110617.0, 219259.0 -0.59
CXB2/ByJ m 150250.0 71608.0   3 41343.0 0.477 86922.0, 227956.0 -0.63
CXB3/ByJ m 73382.0 41593.0   2   29410.0 0.567 43972.0, 102793.0 -1.09
CXB4/ByJ m 202805.0 43978.0   2   31097.0 0.217 171708.0, 233902.0 -0.31
CXB6/ByJ m 201278.0 131088.0   3 75684.0 0.651 63886.0, 324989.0 -0.32
CXB7/ByJ m 397571.0 183845.0   2   129998.0 0.462 267572.0, 527569.0 0.85
CXB8/HiAJ m 194068.0 7218.0   3 4167.0 0.0372 186136.0, 200248.0 -0.36
CXB9/HiAJ m 145705.0 109432.0   3 63181.0 0.751 34101.0, 252827.0 -0.65
DBA/2J m 349564.0 61395.0   4 30698.0 0.176 296142.0, 425254.0 0.57
FVB/NJ m 247911.0 0.0   1   0.0 0.0 247911.0, 247911.0 -0.04
I/LnJ m 414191.0 0.0   1   0.0 0.0 414191.0, 414191.0 0.95
KK/HlJ m 175381.0 0.0   1   0.0 0.0 175381.0, 175381.0 -0.48
LG/J m 232950.0 0.0   1   0.0 0.0 232950.0, 232950.0 -0.13
LP/J m 284315.0 0.0   1   0.0 0.0 284315.0, 284315.0 0.18
MA/MyJ m 106192.0 0.0   1   0.0 0.0 106192.0, 106192.0 -0.89
NOD/ShiLtJ m 96646.0 0.0   1   0.0 0.0 96646.0, 96646.0 -0.95
NON/ShiLtJ m 122552.0 0.0   1   0.0 0.0 122552.0, 122552.0 -0.79
NZW/LacJ m 128798.0 0.0   1   0.0 0.0 128798.0, 128798.0 -0.76
PL/J m 139108.0 0.0   1   0.0 0.0 139108.0, 139108.0 -0.69
RIIIS/J m 160437.0 0.0   1   0.0 0.0 160437.0, 160437.0 -0.57
SEA/GnJ m 266168.0 0.0   1   0.0 0.0 266168.0, 266168.0 0.07
SJL/J m 1327488.0 0.0   1   0.0 0.0 1327488.0, 1327488.0 6.43
SM/J m 393213.0 0.0   1   0.0 0.0 393213.0, 393213.0 0.83
SWR/J m 280468.0 0.0   1   0.0 0.0 280468.0, 280468.0 0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 114242.15 59494.5731 235149.6695 0.0
AXB19b/PgnJ m 413900.5 59494.5731 534808.0195 292992.9805
AXB24/PgnJ m 122918.85 59494.5731 243826.3695 2011.3305
BALB/cJ m 177279.2333 48577.1155 275999.8096 78558.6571
BXA16/PgnJ m 285338.95 59494.5731 406246.4695 164431.4305
BXD19/TyJ m 354337.35 59494.5731 475244.8695 233429.8305
BXD28/TyJ m 161588.15 59494.5731 282495.6695 40680.6305
BXH4/TyJ m 271820.05 59494.5731 392727.5695 150912.5305
C3H/HeJ m 198148.3 59494.5731 319055.8195 77240.7805
C57BL/6J m 137396.86 37627.6719 213865.4896 60928.2304
CXB11/HiAJ m 213567.5 59494.5731 334475.0195 92659.9805
CXB12/HiAJ m 132641.5 59494.5731 253549.0195 11733.9805
CXB13/HiAJ m 228829.8667 48577.1155 327550.4429 130109.2904
CXB1/ByJ m 157238.0667 48577.1155 255958.6429 58517.4904
CXB2/ByJ m 150249.9333 48577.1155 248970.5096 51529.3571
CXB3/ByJ m 73382.25 59494.5731 194289.7695 0.0
CXB4/ByJ m 202804.7 59494.5731 323712.2195 81897.1805
CXB6/ByJ m 201277.7 48577.1155 299998.2763 102557.1237
CXB7/ByJ m 397570.7 59494.5731 518478.2195 276663.1805
CXB8/HiAJ m 194068.1333 48577.1155 292788.7096 95347.5571
CXB9/HiAJ m 145705.4333 48577.1155 244426.0096 46984.8571
DBA/2J m 349563.875 42069.0161 435058.4019 264069.3481




  GWAS USING LINEAR MIXED MODELS