Project measure / variable:   Jentsch2   timeout1_FR5

ID, description, units MPD:49729   timeout1_FR5   Fixed ratio 5 - time-out: number of responses   [n]  day 1  
cocaine study
Data set, strains Jentsch2   BXD   4 strains     sex: both     age: 8-17wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Jentsch2 - Fixed ratio 5 - time-out: number of responses day 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested2 strains4 strains
Mean of the strain means8.30   n 10.9   n
Median of the strain means8.30   n 10.2   n
SD of the strain means± 3.96 ± 4.11
Coefficient of variation (CV)0.477 0.376
Min–max range of strain means5.50   –   11.1   n 7.00   –   16.3   n
Mean sample size per strain4.5   mice 7.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.8733 2.8733 0.1226 0.7303
strain 1 42.1498 42.1498 1.7978 0.1967
sex:strain 1 208.4076 208.4076 8.8889 0.008
Residuals 18 422.0238 23.4458


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD31/TyJ m 8.57 10.5   7 3.98 1.23 -0.58
BXD38/TyJ f 11.1 4.53   7 1.71 0.406 3.0, 18.0 0.71
BXD38/TyJ m 7.0 4.55   10 1.44 0.649 -0.96
BXD42/TyJ m 11.9 8.01   9 2.67 0.673 4.0, 27.0 0.23
BXD68/RwwJ f 5.5 3.54   2   2.5 0.643 3.0, 8.0 -0.71
BXD68/RwwJ m 16.3 7.09   3 4.1 0.434 10.0, 24.0 1.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD38/TyJ f 11.1429 1.8301 14.9878 7.2979
BXD38/TyJ m 7.0 1.5312 10.2169 3.7831
BXD68/RwwJ f 5.5 3.4239 12.6933 0.0
BXD68/RwwJ m 16.3333 2.7956 22.2066 10.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD38/TyJ both 9.0714 1.1931 11.578 6.5648
BXD68/RwwJ both 10.9167 2.2101 15.5599 6.2734




GWAS analysis not available: SNP data is not available for enough strains (at least 4)