Project measure / variable:   Hackstein1   T_CD4_39

ID, description, units MPD:49120   T_CD4_39   bronchoalveolar lavage CD3+ CD4+ CD25hi Foxp3+ CD39+ Treg cells (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage CD3+ CD4+ CD25hi Foxp3+ CD39+ Treg cells (percentage of CD45+ cells)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means0.333   %
Median of the strain means0.294   %
SD of the strain means± 0.110
Coefficient of variation (CV)0.330
Min–max range of strain means0.234   –   0.488   %
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 0.2415 0.0604 25.3936 < 0.0001
Residuals 20 0.0476 0.0024


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPasCrl m 0.404 0.0559   5 0.025 0.138 0.33, 0.46 0.65
BALB/cAnNCrl m 0.488 0.061   5 0.0273 0.125 0.43, 0.59 1.41
C3H/HeNCrl m 0.294 0.0404   5 0.0181 0.137 0.23, 0.34 -0.35
C57BL/6NCrl m 0.244 0.0498   5 0.0223 0.204 0.21, 0.33 -0.81
DBA/2NCrl m 0.234 0.0305   5 0.0136 0.13 0.18, 0.25 -0.9


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 0.404 0.0218 0.4495 0.3585
BALB/cAnNCrl m 0.488 0.0218 0.5335 0.4425
C3H/HeNCrl m 0.294 0.0218 0.3395 0.2485
C57BL/6NCrl m 0.244 0.0218 0.2895 0.1985
DBA/2NCrl m 0.234 0.0218 0.2795 0.1885




GWAS analysis not available: SNP data is not available for enough strains (at least 4)