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Project measure / variable:   Hackstein1   Lin_neg_90_plus

ID, description, units MPD:49111   Lin_neg_90_plus   bronchoalveolar lavage Linneg CD90+ innate cells (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage Linneg CD90+ innate cells (percentage of CD45+ cells)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means1.49   %
Median of the strain means1.43   %
SD of the strain means± 0.493
Coefficient of variation (CV)0.331
Min–max range of strain means0.773   –   2.12   %
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 5.7431 1.4358 6.6731 0.0009
Residuals 24 5.1638 0.2152


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPasCrl m 1.71 0.658   5 0.294 0.385 0.63, 2.41 0.45
BALB/cAnNCrl m 2.12 0.292   6 0.119 0.138 1.75, 2.41 1.29
C3H/HeNCrl m 1.4 0.255   6 0.104 0.182 1.13, 1.72 -0.18
C57BL/6NCrl m 1.43 0.709   6 0.29 0.496 0.76, 2.41 -0.11
DBA/2NCrl m 0.773 0.181   6 0.074 0.234 0.53, 0.96 -1.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 1.708 0.2074 2.1361 1.2799
BALB/cAnNCrl m 2.1167 0.1894 2.5075 1.7258
C3H/HeNCrl m 1.3983 0.1894 1.7892 1.0075
C57BL/6NCrl m 1.43 0.1894 1.8208 1.0392
DBA/2NCrl m 0.7733 0.1894 1.1642 0.3825




GWAS analysis not available: SNP data is not available for enough strains (at least 4)