Project measure / variable:   Gould3   FC_CS_6

ID, description, units MPD:47368   FC_CS_6   withdrawal study group, percent immobility in altered context chamber, cue   [%]  dose: 6.3 mg  
nicotine study
Data set, strains Gould3   inbred   8 strains     sex: m     age: 8-12wks
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould3 - withdrawal study group, percent immobility in altered context chamber, cue dose: 6.3 mg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means61.2   %
Median of the strain means56.1   %
SD of the strain means± 14.1
Coefficient of variation (CV)0.231
Min–max range of strain means47.6   –   90.1   %
Mean sample size per strain10.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 13935.3164 1990.7595 14.4275 < 0.0001
Residuals 77 10624.7436 137.9837


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 90.1 7.74   9 2.58 0.0859 77.8, 100.0 2.05
A/J m 51.9 13.9   12 4.01 0.268 27.8, 72.2 -0.66
BALB/cByJ m 68.3 10.5   10 3.32 0.154 44.4, 77.8 0.5
C3H/HeJ m 58.9 10.2   10 3.23 0.174 44.4, 72.2 -0.16
C57BL/6J m 68.9 7.04   10 2.23 0.102 61.1, 77.8 0.55
CBA/J m 50.6 11.8   10 3.75 0.234 27.8, 66.7 -0.75
DBA/1J m 53.3 16.0   10 5.06 0.3 33.3, 77.8 -0.56
DBA/2J m 47.6 12.7   14 3.38 0.266 16.7, 66.7 -0.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 90.1111 3.9155 97.908 82.3143
A/J m 51.8583 3.391 58.6106 45.1061
BALB/cByJ m 68.33 3.7146 75.7267 60.9333
C3H/HeJ m 58.88 3.7146 66.2767 51.4833
C57BL/6J m 68.9 3.7146 76.2967 61.5033
CBA/J m 50.56 3.7146 57.9567 43.1633
DBA/1J m 53.33 3.7146 60.7267 45.9333
DBA/2J m 47.6214 3.1394 53.8728 41.37




  GWAS USING LINEAR MIXED MODELS