Project measure / variable:   Gould3   FC_preCS_12

ID, description, units MPD:47364   FC_preCS_12   withdrawal study group, percent immobility in altered context chamber, pre-cue   [%]  dose: 12 mg  
nicotine study
Data set, strains Gould3   inbred   8 strains     sex: m     age: 8-12wks
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould3 - withdrawal study group, percent immobility in altered context chamber, pre-cue dose: 12 mg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means8.11   %
Median of the strain means0.880   %
SD of the strain means± 14.2
Coefficient of variation (CV)1.75
Min–max range of strain means0   –   40.9   %
Mean sample size per strain10.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 18321.8907 2617.413 40.9977 < 0.0001
Residuals 79 5043.5851 63.8428


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 8.9 5.97   10 1.89 0.671 0.06
A/J m 40.9 15.7   14 4.19 0.383 11.1, 66.7 2.31
BALB/cByJ m 0.0 0.0   10 0.0 0.0 -0.57
C3H/HeJ m 0.0 0.0   9 0.0 0.0 -0.57
C57BL/6J m 0.56 1.77   10 0.56 3.16 -0.53
CBA/J m 13.3 12.6   10 3.98 0.944 0.37
DBA/1J m 0.0 0.0   10 0.0 0.0 -0.57
DBA/2J m 1.2 2.38   14 0.637 1.99 -0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 8.9 2.5267 13.9293 3.8707
A/J m 40.8857 2.1355 45.1362 36.6352
BALB/cByJ m 0.0 2.5267 5.0293 -5.0293
C3H/HeJ m 0.0 2.6634 5.3013 -5.3013
C57BL/6J m 0.56 2.5267 5.5893 -4.4693
CBA/J m 13.34 2.5267 18.3693 8.3107
DBA/1J m 0.0 2.5267 5.0293 -5.0293
DBA/2J m 1.2 2.1355 5.4505 -3.0505




  GWAS USING LINEAR MIXED MODELS