Project measure / variable:   Gould3   FC_context_12

ID, description, units MPD:47349   FC_context_12   withdrawal study group, percent immobility in training chamber, 24h after fear conditioning   [%]  dose 12 mg  
nicotine study
Data set, strains Gould3   inbred   8 strains     sex: m     age: 8-12wks
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould3 - withdrawal study group, percent immobility in training chamber, 24h after fear conditioning dose 12 mg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means22.9   %
Median of the strain means18.1   %
SD of the strain means± 17.4
Coefficient of variation (CV)0.757
Min–max range of strain means3.33   –   55.3   %
Mean sample size per strain10.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 22198.0452 3171.1493 30.725 < 0.0001
Residuals 79 8153.6486 103.2107


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 55.3 10.4   10 3.3 0.189 40.0, 73.3 1.86
A/J m 41.9 15.2   14 4.06 0.362 23.3, 73.3 1.09
BALB/cByJ m 14.0 8.15   10 2.58 0.582 3.3, 26.7 -0.51
C3H/HeJ m 3.33 3.73   9 1.24 1.12 -1.13
C57BL/6J m 18.0 6.12   10 1.94 0.34 10.0, 26.7 -0.28
CBA/J m 23.7 15.0   10 4.75 0.634 6.7, 53.3 0.04
DBA/1J m 9.0 5.69   10 1.8 0.632 -0.8
DBA/2J m 18.3 7.91   14 2.11 0.432 6.7, 33.3 -0.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 55.32 3.2126 61.7146 48.9254
A/J m 41.9 2.7152 47.3044 36.4956
BALB/cByJ m 14.0 3.2126 20.3946 7.6054
C3H/HeJ m 3.3333 3.3864 10.0738 0.0
C57BL/6J m 18.0 3.2126 24.3946 11.6054
CBA/J m 23.66 3.2126 30.0546 17.2654
DBA/1J m 9.0 3.2126 15.3946 2.6054
DBA/2J m 18.3286 2.7152 23.733 12.9241




  GWAS USING LINEAR MIXED MODELS