Project measure / variable:   Chesler4   VC_bottom_distance_first4

ID, description, units MPD:47016   VC_bottom_distance_first4   distance traveled in bottom during first 4 min (response to novelty), 20 min test   [cm]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure visual cliff
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means873   cm 712   cm
Median of the strain means923   cm 824   cm
SD of the strain means± 361 ± 306
Coefficient of variation (CV)0.413 0.430
Min–max range of strain means380   –   1420   cm 221   –   1047   cm
Mean sample size per strain8.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1665663.0834 1665663.0834 6.7072 0.01
strain 8 12470383.0656 1558797.8832 6.2769 < 0.0001
sex:strain 8 527722.6147 65965.3268 0.2656 0.9766
Residuals 381 94616858.503 248338.2113


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 380.0 156.0   8 55.0 0.41 181.0, 640.0 -1.37
129S1/SvImJ m 349.0 194.0   7 73.4 0.556 132.0, 591.0 -1.19
A/J f 434.0 274.0   4 137.0 0.632 118.0, 787.0 -1.22
A/J m 221.0 139.0   5 62.0 0.628 54.1, 390.0 -1.6
C57BL/6J f 923.0 276.0   8 97.7 0.299 562.0, 1309.0 0.14
C57BL/6J m 803.0 300.0   7 113.0 0.374 317.0, 1244.0 0.3
CAST/EiJ f 1187.0 226.0   8 79.9 0.19 790.0, 1449.0 0.87
CAST/EiJ m 993.0 451.0   8 159.0 0.454 423.0, 1760.0 0.92
J:DO f 937.0 554.0   142 46.5 0.591 4.89, 2327.0 0.18
J:DO m 824.0 540.0   138 46.0 0.655 7.6, 2451.0 0.36
NOD/ShiLtJ f 1420.0 407.0   8 144.0 0.287 906.0, 2094.0 1.52
NOD/ShiLtJ m 1047.0 472.0   8 167.0 0.451 541.0, 2027.0 1.09
NZO/HlLtJ f 589.0 268.0   8 94.7 0.454 347.0, 1209.0 -0.79
NZO/HlLtJ m 400.0 208.0   8 73.6 0.521 192.0, 818.0 -1.02
PWK/PhJ f 782.0 426.0   8 150.0 0.544 261.0, 1361.0 -0.25
PWK/PhJ m 827.0 302.0   8 107.0 0.365 472.0, 1182.0 0.37
WSB/EiJ f 1206.0 474.0   8 168.0 0.393 622.0, 1980.0 0.92
WSB/EiJ m 948.0 336.0   8 119.0 0.354 606.0, 1433.0 0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 379.6875 176.1882 726.1105 33.2645
129S1/SvImJ m 349.0 188.3531 719.3417 0.0
A/J f 433.53 249.1677 923.446 0.0
A/J m 220.72 222.8624 658.9142 0.0
C57BL/6J f 923.14 176.1882 1269.563 576.717
C57BL/6J m 803.1171 188.3531 1173.4589 432.7754
CAST/EiJ f 1186.96 176.1882 1533.383 840.537
CAST/EiJ m 993.0112 176.1882 1339.4342 646.5883
J:DO f 937.0346 41.8194 1019.2603 854.809
J:DO m 824.0391 42.4211 907.4479 740.6302
NOD/ShiLtJ f 1419.7237 176.1882 1766.1467 1073.3008
NOD/ShiLtJ m 1046.9175 176.1882 1393.3405 700.4945
NZO/HlLtJ f 589.375 176.1882 935.798 242.952
NZO/HlLtJ m 399.6625 176.1882 746.0855 53.2395
PWK/PhJ f 781.7775 176.1882 1128.2005 435.3545
PWK/PhJ m 827.4013 176.1882 1173.8242 480.9783
WSB/EiJ f 1206.3963 176.1882 1552.8192 859.9733
WSB/EiJ m 948.4963 176.1882 1294.9192 602.0733


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 364.3437 128.9565 617.8994 110.7881
A/J both 327.125 167.1468 655.7707 0.0
C57BL/6J both 863.1286 128.9565 1116.6842 609.5729
CAST/EiJ both 1089.9856 124.5839 1334.9436 845.0276
J:DO both 880.5369 29.7843 939.099 821.9747
NOD/ShiLtJ both 1233.3206 124.5839 1478.2786 988.3626
NZO/HlLtJ both 494.5188 124.5839 739.4768 249.5607
PWK/PhJ both 804.5894 124.5839 1049.5474 559.6314
WSB/EiJ both 1077.4463 124.5839 1322.4043 832.4882




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA