Project measure / variable:   Chesler4   OF_distance_first4

ID, description, units MPD:47001   OF_distance_first4   distance traveled in first 4 min, response to novelty, 20 min test   [cm]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1581   cm 1491   cm
Median of the strain means1412   cm 1552   cm
SD of the strain means± 857 ± 787
Coefficient of variation (CV)0.542 0.528
Min–max range of strain means302   –   2899   cm 336   –   2597   cm
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 461569.4576 461569.4576 2.0534 0.1527
strain 8 85607573.9837 10700946.748 47.6059 < 0.0001
sex:strain 8 3135481.4656 391935.1832 1.7436 0.0868
Residuals 393 88339271.6163 224781.8616


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 958.0 347.0   8 123.0 0.362 554.0, 1561.0 -0.73
129S1/SvImJ m 737.0 240.0   8 84.8 0.326 371.0, 1120.0 -0.96
A/J f 302.0 52.5   8 18.6 0.174 197.0, 368.0 -1.49
A/J m 336.0 107.0   8 37.8 0.319 224.0, 501.0 -1.47
C57BL/6J f 1774.0 352.0   8 124.0 0.198 1381.0, 2551.0 0.22
C57BL/6J m 2039.0 287.0   8 102.0 0.141 1671.0, 2564.0 0.7
CAST/EiJ f 2899.0 396.0   8 140.0 0.137 2233.0, 3436.0 1.54
CAST/EiJ m 2105.0 673.0   8 238.0 0.32 1027.0, 3406.0 0.78
J:DO f 1412.0 511.0   144 42.6 0.362 347.0, 2982.0 -0.2
J:DO m 1356.0 494.0   139 41.9 0.364 388.0, 2628.0 -0.17
NOD/ShiLtJ f 2282.0 524.0   8 185.0 0.23 1580.0, 3352.0 0.82
NOD/ShiLtJ m 2085.0 565.0   8 200.0 0.271 800.0, 2795.0 0.76
NZO/HlLtJ f 741.0 334.0   8 118.0 0.45 494.0, 1522.0 -0.98
NZO/HlLtJ m 612.0 128.0   8 45.2 0.209 464.0, 800.0 -1.12
PWK/PhJ f 1385.0 470.0   8 166.0 0.339 282.0, 1733.0 -0.23
PWK/PhJ m 1552.0 172.0   8 60.9 0.111 1264.0, 1807.0 0.08
WSB/EiJ f 2480.0 482.0   8 171.0 0.195 1771.0, 3282.0 1.05
WSB/EiJ m 2597.0 501.0   8 177.0 0.193 2103.0, 3635.0 1.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 957.89 167.6238 1287.4415 628.3385
129S1/SvImJ m 736.6938 167.6238 1066.2452 407.1423
A/J f 301.8388 167.6238 631.3902 0.0
A/J m 335.6975 167.6238 665.249 6.146
C57BL/6J f 1774.1975 167.6238 2103.749 1444.646
C57BL/6J m 2038.825 167.6238 2368.3765 1709.2735
CAST/EiJ f 2898.9112 167.6238 3228.4627 2569.3598
CAST/EiJ m 2104.6325 167.6238 2434.184 1775.081
J:DO f 1412.4214 39.5093 1490.0974 1334.7454
J:DO m 1356.1119 40.2136 1435.1727 1277.0512
NOD/ShiLtJ f 2281.74 167.6238 2611.2915 1952.1885
NOD/ShiLtJ m 2085.14 167.6238 2414.6915 1755.5885
NZO/HlLtJ f 741.0062 167.6238 1070.5577 411.4548
NZO/HlLtJ m 612.0225 167.6238 941.574 282.471
PWK/PhJ f 1385.2738 167.6238 1714.8252 1055.7223
PWK/PhJ m 1551.8163 167.6238 1881.3677 1222.2648
WSB/EiJ f 2479.5112 167.6238 2809.0627 2149.9598
WSB/EiJ m 2596.5063 167.6238 2926.0577 2266.9548


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 847.2919 118.5279 1080.32 614.2638
A/J both 318.7681 118.5279 551.7962 85.74
C57BL/6J both 1906.5112 118.5279 2139.5393 1673.4832
CAST/EiJ both 2501.7719 118.5279 2734.8 2268.7438
J:DO both 1384.2667 28.1874 1439.6836 1328.8497
NOD/ShiLtJ both 2183.44 118.5279 2416.4681 1950.4119
NZO/HlLtJ both 676.5144 118.5279 909.5425 443.4863
PWK/PhJ both 1468.545 118.5279 1701.5731 1235.5169
WSB/EiJ both 2538.0087 118.5279 2771.0368 2304.9807




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA