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Project measure / variable:   Boon1   bw_change_lo

ID, description, units MPD:46911   bw_change_lo   change in body weight, post-infection   [%]  dose group: low  
influenza A (H5N1) virus study
Data set, strains Boon1   inbred   18 strains     sex: f     age: 6-9wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Boon1 - change in body weight, post-infection dose group: low



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means95.5   %
Median of the strain means98.3   %
SD of the strain means± 10.2
Coefficient of variation (CV)0.107
Min–max range of strain means78.1   –   108   %
Mean sample size per strain9.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 16687.39 981.6112 11.4589 < 0.0001
Residuals 159 13620.5786 85.664


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 104.0 6.26   10 1.98 0.0603 88.8, 108.0 0.83
129X1/SvJ f 80.3 11.2   5 5.01 0.14 73.0, 100.0 -1.49
A/HeJ f 98.1 10.2   9 3.4 0.104 81.5, 109.0 0.26
A/J f 78.1 9.99   10 3.16 0.128 70.6, 101.0 -1.71
AKR/J f 108.0 3.93   5 1.76 0.0366 103.0, 113.0 1.23
B10.D2-Hc0 f 86.4 10.0   8 3.55 0.116 71.7, 99.2 -0.89
B10.D2-Hc1 f 103.0 2.83   2   2.0 0.0274 101.0, 105.0 0.74
B6D2F1/J f 107.0 6.4   20 1.43 0.0598 91.9, 116.0 1.13
BTBR T+ Itpr3tf/J f 97.6 12.6   10 3.98 0.129 77.4, 114.0 0.21
C3H/HeJ f 108.0 4.32   5 1.93 0.04 101.0, 113.0 1.23
C57BL/6J f 103.0 3.65   15 0.941 0.0352 97.1, 110.0 0.74
DBA/1J f 85.6 14.0   10 4.44 0.164 72.1, 112.0 -0.97
DBA/2J f 87.4 11.7   30 2.13 0.134 71.8, 108.0 -0.8
FVB/NJ f 105.0 3.66   5 1.63 0.0349 102.0, 111.0 0.93
LP/J f 85.0 9.89   14 2.64 0.116 72.2, 105.0 -1.03
NOD/ShiLtJ f 99.4 0.746   5 0.334 0.00751 98.4, 100.0 0.38
NZB/BlNJ f 84.6 8.07   9 2.69 0.0954 76.1, 95.8 -1.07
NZW/LacJ f 98.5 7.44   5 3.33 0.0755 89.3, 108.0 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 103.83 2.9268 109.6105 98.0495
129X1/SvJ f 80.28 4.1392 88.4549 72.1051
A/HeJ f 98.1333 3.0852 104.2265 92.0402
A/J f 78.14 2.9268 83.9205 72.3595
AKR/J f 107.58 4.1392 115.7549 99.4051
B10.D2-Hc0 f 86.3625 3.2723 92.8253 79.8997
B10.D2-Hc1 f 103.4 6.5446 116.3256 90.4744
B6D2F1/J f 106.955 2.0696 111.0424 102.8676
BTBR T+ Itpr3tf/J f 97.58 2.9268 103.3605 91.7995
C3H/HeJ f 107.92 4.1392 116.0949 99.7451
C57BL/6J f 103.5 2.3898 108.2198 98.7802
DBA/1J f 85.62 2.9268 91.4005 79.8395
DBA/2J f 87.3967 1.6898 90.734 84.0593
FVB/NJ f 104.74 4.1392 112.9149 96.5651
LP/J f 85.0357 2.4736 89.9211 80.1503
NOD/ShiLtJ f 99.42 4.1392 107.5949 91.2451
NZB/BlNJ f 84.6222 3.0852 90.7154 78.529
NZW/LacJ f 98.54 4.1392 106.7149 90.3651




  GWAS USING LINEAR MIXED MODELS