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Project measure / variable:   HMDPpheno2   FFA

ID, description, units MPD:46405   FFA   free fatty acids (plasma FFA)   [mEq/L]  
Data set, strains HMDPpheno2   HMDP w/par   99 strains     sex: m     age: 16wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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HMDPpheno2 - free fatty acids (plasma FFA)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested99 strains
Mean of the strain means50.0   mEq/L
Median of the strain means47.0   mEq/L
SD of the strain means± 14.3
Coefficient of variation (CV)0.285
Min–max range of strain means26.8   –   87.3   mEq/L
Mean sample size per strain6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 97 140314.2221 1446.5384 11.2094 < 0.0001
Residuals 562 72524.481 129.0471


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 62.2 13.9   8 4.9 0.223 49.0, 90.0 0.85
A/J m 63.8 5.91   6 2.41 0.0926 53.0, 70.0 0.97
AKR/J m 66.2 8.58   8 3.03 0.13 58.0, 82.0 1.14
AXB10/PgnJ m 41.2 7.43   5 3.32 0.18 32.0, 52.0 -0.62
AXB12/PgnJ m 42.0 7.95   6 3.25 0.189 34.0, 54.0 -0.56
AXB13/PgnJ m 39.0 5.4   6 2.21 0.139 29.0, 45.0 -0.77
AXB15/PgnJ m 36.2 4.45   6 1.82 0.123 30.0, 43.0 -0.97
AXB19a/PgnJ m 35.6 8.14   5 3.64 0.229 22.0, 43.0 -1.01
AXB19b/PgnJ m 35.5 9.7   8 3.43 0.273 25.0, 48.0 -1.02
AXB19/PgnJ m 46.3 11.9   6 4.86 0.257 31.0, 60.0 -0.26
AXB1/PgnJ m 42.8 9.54   4 4.77 0.223 31.0, 51.0 -0.5
AXB23/PgnJ m 51.5 7.87   6 3.21 0.153 38.0, 59.0 0.11
AXB24/PgnJ m 41.2 5.26   5 2.35 0.128 34.0, 47.0 -0.62
AXB2/PgnJ m 54.5 6.28   6 2.57 0.115 47.0, 63.0 0.32
AXB4/PgnJ m 52.7 10.0   6 4.09 0.19 35.0, 63.0 0.19
AXB5/PgnJ m 45.2 6.24   4 3.12 0.138 37.0, 52.0 -0.34
AXB6/PgnJ m 41.6 8.4   8 2.97 0.202 31.0, 54.0 -0.59
AXB8/PgnJ m 48.4 5.55   5 2.48 0.115 42.0, 56.0 -0.11
B6cC3-1/KccJ m 67.0 12.1   6 4.95 0.181 49.0, 81.0 1.19
BALB/cJ m 56.0 15.5   10 4.9 0.277 27.0, 72.0 0.42
BTBR T+ Itpr3tf/J m 58.8 7.96   10 2.52 0.135 45.0, 70.0 0.62
BUB/BnJ m 59.2 8.77   9 2.92 0.148 45.0, 68.0 0.64
BXA11/PgnJ m 40.7 6.86   6 2.8 0.169 29.0, 47.0 -0.65
BXA12/PgnJ m 60.0 16.8   4 8.41 0.28 42.0, 78.0 0.7
BXA13/PgnJ m 47.3 7.37   6 3.01 0.156 37.0, 58.0 -0.19
BXA14/PgnJ m 36.7 11.4   6 4.65 0.31 20.0, 47.0 -0.93
BXA16/PgnJ m 48.6 7.0   7 2.64 0.144 35.0, 57.0 -0.1
BXA1/PgnJ m 35.5 4.95   2   3.5 0.139 32.0, 39.0 -1.02
BXA24/PgnJ m 42.2 8.64   6 3.53 0.205 29.0, 51.0 -0.55
BXA25/PgnJ m 39.7 5.65   6 2.3 0.142 32.0, 47.0 -0.72
BXA26/PgnJ m 32.5 5.13   6 2.09 0.158 26.0, 38.0 -1.23
BXA2/PgnJ m 42.7 9.56   6 3.9 0.224 29.0, 57.0 -0.51
BXA4/PgnJ m 39.0 7.91   5 3.54 0.203 27.0, 46.0 -0.77
BXA7/PgnJ m 42.0 8.65   6 3.53 0.206 30.0, 52.0 -0.56
BXA8/PgnJ m 41.3 5.24   6 2.14 0.127 34.0, 50.0 -0.61
BXD11/TyJ m 43.0 10.4   5 4.66 0.242 26.0, 51.0 -0.49
BXD12/TyJ m 42.3 8.36   6 3.41 0.197 29.0, 51.0 -0.54
BXD13/TyJ m 31.7 4.03   6 1.65 0.127 26.0, 35.0 -1.28
BXD14/TyJ m 40.8 8.35   6 3.41 0.205 31.0, 53.0 -0.64
BXD15/TyJ m 34.8 2.5   4 1.25 0.0719 32.0, 38.0 -1.07
BXD16/TyJ m 56.8 2.06   4 1.03 0.0363 54.0, 59.0 0.48
BXD18/TyJ m 32.5 6.36   2   4.5 0.196 28.0, 37.0 -1.23
BXD19/TyJ m 52.5 10.4   8 3.67 0.198 36.0, 64.0 0.18
BXD1/TyJ m 36.8 11.8   4 5.92 0.322 27.0, 53.0 -0.92
BXD20/TyJ m 33.3 6.02   6 2.46 0.181 27.0, 42.0 -1.17
BXD21/TyJ m 38.5 11.3   4 5.63 0.293 30.0, 55.0 -0.81
BXD22/TyJ m 47.0 0.0   1   0.0 0.0 47.0, 47.0 -0.21
BXD24/TyJ-Cep290rd16/J m 52.2 13.7   6 5.61 0.263 34.0, 62.0 0.15
BXD27/TyJ m 37.2 22.1   4 11.0 0.593 10.0, 64.0 -0.9
BXD28/TyJ m 31.6 8.32   5 3.72 0.263 19.0, 40.0 -1.29
BXD29-Tlr4lps-2J/J m 37.0 8.56   6 3.49 0.231 29.0, 49.0 -0.91
BXD2/TyJ m 40.2 7.09   4 3.54 0.176 33.0, 50.0 -0.69
BXD31/TyJ m 26.8 5.8   4 2.9 0.217 19.0, 33.0 -1.63
BXD32/TyJ m 51.0 8.29   4 4.14 0.162 44.0, 63.0 0.07
BXD33/TyJ m 32.0 6.57   6 2.68 0.205 23.0, 42.0 -1.26
BXD34/TyJ m 43.2 5.42   6 2.21 0.126 37.0, 52.0 -0.48
BXD36/TyJ m 44.2 7.46   4 3.73 0.168 35.0, 53.0 -0.41
BXD38/TyJ m 40.2 9.81   4 4.91 0.244 26.0, 48.0 -0.69
BXD39/TyJ m 42.2 6.98   5 3.12 0.165 31.0, 50.0 -0.55
BXD40/TyJ m 41.7 2.73   6 1.12 0.0656 38.0, 46.0 -0.58
BXD42/TyJ m 47.2 7.63   6 3.11 0.162 36.0, 55.0 -0.2
BXD5/TyJ m 34.8 7.65   6 3.12 0.22 24.0, 44.0 -1.07
BXD6/TyJ m 31.0 4.6   6 1.88 0.149 27.0, 38.0 -1.33
BXD8/TyJ m 39.8 5.12   6 2.09 0.128 35.0, 49.0 -0.71
BXD9/TyJ m 34.0 3.79   6 1.55 0.112 29.0, 39.0 -1.12
BXH10/TyJ m 45.2 9.33   6 3.81 0.206 36.0, 57.0 -0.34
BXH14/TyJ m 79.8 12.0   9 4.02 0.151 56.0, 92.0 2.09
BXH19/TyJ m 71.0 11.9   17 2.89 0.168 47.0, 84.0 1.47
BXH20/KccJ m 57.1 14.1   8 5.0 0.247 34.0, 74.0 0.5
BXH22/KccJ m 51.1 11.7   10 3.7 0.229 31.0, 68.0 0.08
BXH2/TyJ m 49.4 12.9   9 4.31 0.261 27.0, 69.0 -0.04
BXH4/TyJ m 54.5 14.3   11 4.3 0.262 36.0, 83.0 0.32
BXH6/TyJ m 60.1 24.1   10 7.62 0.401 31.0, 96.0 0.71
BXH7/TyJ m 54.7 12.9   10 4.09 0.236 33.0, 72.0 0.33
BXH8/TyJ m 62.7 21.9   11 6.61 0.349 34.0, 106.0 0.89
BXH9/TyJ m 64.2 19.4   8 6.87 0.302 35.0, 87.0 0.99
C3H/HeJ m 69.5 4.87   8 1.72 0.0701 62.0, 76.0 1.37
C57BL/6J m 58.9 6.57   9 2.19 0.111 51.0, 72.0 0.62
C57L/J m 71.5 9.08   10 2.87 0.127 56.0, 81.0 1.51
C58/J m 49.9 18.1   10 5.74 0.364 12.0, 71.0 -0.01
CBA/J m 70.0 7.27   8 2.57 0.104 61.0, 84.0 1.4
CE/J m 64.2 12.0   9 4.0 0.187 41.0, 77.0 0.99
DBA/2J m 70.6 8.68   8 3.07 0.123 55.0, 83.0 1.44
FVB/NJ m 63.3 12.6   3 7.26 0.199 50.0, 75.0 0.93
I/LnJ m 32.8 6.44   9 2.15 0.196 25.0, 42.0 -1.21
KK/HlJ m 62.0 14.5   8 5.13 0.234 42.0, 79.0 0.84
LG/J m 87.3 18.9   7 7.14 0.216 57.0, 114.0 2.61
LP/J m 43.3 7.39   10 2.34 0.171 35.0, 56.0 -0.47
MA/MyJ m 52.0 7.92   6 3.24 0.152 45.0, 66.0 0.14
NOD/ShiLtJ m 78.4 15.5   8 5.46 0.197 66.0, 113.0 1.99
NON/ShiLtJ m 87.3 9.7   11 2.92 0.111 73.0, 107.0 2.61
NZB/BlNJ m 86.6 10.0   7 3.79 0.116 73.0, 105.0 2.56
NZW/LacJ m 65.3 9.55   10 3.02 0.146 53.0, 83.0 1.07
PL/J m 77.3 10.1   6 4.11 0.13 68.0, 94.0 1.91
RIIIS/J m 53.2 11.1   10 3.51 0.209 36.0, 69.0 0.22
SEA/GnJ m 50.1 11.1   11 3.35 0.222 31.0, 71.0 0.01
SJL/J m 32.5 0.707   2   0.5 0.0218 32.0, 33.0 -1.23
SM/J m 77.9 24.6   10 7.77 0.315 33.0, 109.0 1.95
SWR/J m 64.9 15.8   7 5.97 0.244 40.0, 83.0 1.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 62.25 4.0163 70.1388 54.3612
A/J m 63.8333 4.6377 72.9426 54.7241
AKR/J m 66.25 4.0163 74.1388 58.3612
AXB10/PgnJ m 41.2 5.0803 51.1787 31.2213
AXB12/PgnJ m 42.0 4.6377 51.1093 32.8907
AXB13/PgnJ m 39.0 4.6377 48.1093 29.8907
AXB15/PgnJ m 36.1667 4.6377 45.2759 27.0574
AXB19a/PgnJ m 35.6 5.0803 45.5787 25.6213
AXB19b/PgnJ m 35.5 4.0163 43.3888 27.6112
AXB19/PgnJ m 46.3333 4.6377 55.4426 37.2241
AXB1/PgnJ m 42.75 5.6799 53.9065 31.5935
AXB23/PgnJ m 51.5 4.6377 60.6093 42.3907
AXB24/PgnJ m 41.2 5.0803 51.1787 31.2213
AXB2/PgnJ m 54.5 4.6377 63.6093 45.3907
AXB4/PgnJ m 52.6667 4.6377 61.7759 43.5574
AXB5/PgnJ m 45.25 5.6799 56.4065 34.0935
AXB6/PgnJ m 41.625 4.0163 49.5138 33.7362
AXB8/PgnJ m 48.4 5.0803 58.3787 38.4213
B6cC3-1/KccJ m 67.0 4.6377 76.1093 57.8907
BALB/cJ m 56.0 3.5923 63.056 48.944
BTBR T+ Itpr3tf/J m 58.8 3.5923 65.856 51.744
BUB/BnJ m 59.2222 3.7866 66.6599 51.7845
BXA11/PgnJ m 40.6667 4.6377 49.7759 31.5574
BXA12/PgnJ m 60.0 5.6799 71.1565 48.8435
BXA13/PgnJ m 47.3333 4.6377 56.4426 38.2241
BXA14/PgnJ m 36.6667 4.6377 45.7759 27.5574
BXA16/PgnJ m 48.5714 4.2936 57.005 40.1379
BXA1/PgnJ m 35.5 8.0327 51.2777 19.7223
BXA24/PgnJ m 42.1667 4.6377 51.2759 33.0574
BXA25/PgnJ m 39.6667 4.6377 48.7759 30.5574
BXA26/PgnJ m 32.5 4.6377 41.6093 23.3907
BXA2/PgnJ m 42.6667 4.6377 51.7759 33.5574
BXA4/PgnJ m 39.0 5.0803 48.9787 29.0213
BXA7/PgnJ m 42.0 4.6377 51.1093 32.8907
BXA8/PgnJ m 41.3333 4.6377 50.4426 32.2241
BXD11/TyJ m 43.0 5.0803 52.9787 33.0213
BXD12/TyJ m 42.3333 4.6377 51.4426 33.2241
BXD13/TyJ m 31.6667 4.6377 40.7759 22.5574
BXD14/TyJ m 40.8333 4.6377 49.9426 31.7241
BXD15/TyJ m 34.75 5.6799 45.9065 23.5935
BXD16/TyJ m 56.75 5.6799 67.9065 45.5935
BXD18/TyJ m 32.5 8.0327 48.2777 16.7223
BXD19/TyJ m 52.5 4.0163 60.3888 44.6112
BXD1/TyJ m 36.75 5.6799 47.9065 25.5935
BXD20/TyJ m 33.3333 4.6377 42.4426 24.2241
BXD21/TyJ m 38.5 5.6799 49.6565 27.3435
BXD24/TyJ-Cep290rd16/J m 52.1667 4.6377 61.2759 43.0574
BXD27/TyJ m 37.25 5.6799 48.4065 26.0935
BXD28/TyJ m 31.6 5.0803 41.5787 21.6213
BXD29-Tlr4lps-2J/J m 37.0 4.6377 46.1093 27.8907
BXD2/TyJ m 40.25 5.6799 51.4065 29.0935
BXD31/TyJ m 26.75 5.6799 37.9065 15.5935
BXD32/TyJ m 51.0 5.6799 62.1565 39.8435
BXD33/TyJ m 32.0 4.6377 41.1093 22.8907
BXD34/TyJ m 43.1667 4.6377 52.2759 34.0574
BXD36/TyJ m 44.25 5.6799 55.4065 33.0935
BXD38/TyJ m 40.25 5.6799 51.4065 29.0935
BXD39/TyJ m 42.2 5.0803 52.1787 32.2213
BXD40/TyJ m 41.6667 4.6377 50.7759 32.5574
BXD42/TyJ m 47.1667 4.6377 56.2759 38.0574
BXD5/TyJ m 34.8333 4.6377 43.9426 25.7241
BXD6/TyJ m 31.0 4.6377 40.1093 21.8907
BXD8/TyJ m 39.8333 4.6377 48.9426 30.7241
BXD9/TyJ m 34.0 4.6377 43.1093 24.8907
BXH10/TyJ m 45.1667 4.6377 54.2759 36.0574
BXH14/TyJ m 79.7778 3.7866 87.2155 72.3401
BXH19/TyJ m 71.0 2.7552 76.4117 65.5883
BXH20/KccJ m 57.125 4.0163 65.0138 49.2362
BXH22/KccJ m 51.1 3.5923 58.156 44.044
BXH2/TyJ m 49.4444 3.7866 56.8821 42.0068
BXH4/TyJ m 54.4545 3.4251 61.1822 47.7269
BXH6/TyJ m 60.1 3.5923 67.156 53.044
BXH7/TyJ m 54.7 3.5923 61.756 47.644
BXH8/TyJ m 62.7273 3.4251 69.4549 55.9996
BXH9/TyJ m 64.25 4.0163 72.1388 56.3612
C3H/HeJ m 69.5 4.0163 77.3888 61.6112
C57BL/6J m 58.8889 3.7866 66.3266 51.4512
C57L/J m 71.5 3.5923 78.556 64.444
C58/J m 49.9 3.5923 56.956 42.844
CBA/J m 70.0 4.0163 77.8888 62.1112
CE/J m 64.2222 3.7866 71.6599 56.7845
DBA/2J m 70.625 4.0163 78.5138 62.7362
FVB/NJ m 63.3333 6.5586 76.2158 50.4509
I/LnJ m 32.7778 3.7866 40.2155 25.3401
KK/HlJ m 62.0 4.0163 69.8888 54.1112
LG/J m 87.2857 4.2936 95.7192 78.8522
LP/J m 43.3 3.5923 50.356 36.244
MA/MyJ m 52.0 4.6377 61.1093 42.8907
NOD/ShiLtJ m 78.375 4.0163 86.2638 70.4862
NON/ShiLtJ m 87.2727 3.4251 94.0004 80.5451
NZB/BlNJ m 86.5714 4.2936 95.005 78.1379
NZW/LacJ m 65.3 3.5923 72.356 58.244
PL/J m 77.3333 4.6377 86.4426 68.2241
RIIIS/J m 53.2 3.5923 60.256 46.144
SEA/GnJ m 50.0909 3.4251 56.8185 43.3633
SJL/J m 32.5 8.0327 48.2777 16.7223
SM/J m 77.9 3.5923 84.956 70.844
SWR/J m 64.8571 4.2936 73.2907 56.4236




  GWAS USING LINEAR MIXED MODELS