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Project measure / variable:   Tarantino1   rear_diff

ID, description, units MPD:45923   rear_diff   rearing episodes, 30 min test   [n]  difference  
cocaine study
Data set, strains Tarantino1   inbred   45 strains     sex: m     age:
Procedure open field test
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  STRAIN COMPARISON PLOT
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Tarantino1 - rearing episodes, 30 min test difference



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested45 strains
Mean of the strain means59.5   n
Median of the strain means49.4   n
SD of the strain means± 78.4
Coefficient of variation (CV)1.32
Min–max range of strain means-117   –   230   n
Mean sample size per strain18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 44 4616489.9316 104920.2257 10.6544 < 0.0001
Residuals 793 7809145.128 9847.5979


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.4 1.19   20 0.266 2.97 -1.0, 5.0 -0.75
A/J m 22.4 26.6   23 5.54 1.19 -2.0, 119.0 -0.47
AKR/J m 88.0 54.5   20 12.2 0.619 11.0, 194.0 0.36
BALB/cByJ m 108.0 69.9   18 16.5 0.647 -14.0, 227.0 0.62
BTBR T+ Itpr3tf/J m 35.3 29.1   19 6.68 0.825 1.0, 91.0 -0.31
BUB/BnJ m 207.0 92.1   17 22.3 0.445 82.0, 327.0 1.88
C3H/HeJ m -64.6 131.0   20 29.3 -2.03 -396.0, 113.0 -1.58
C57BL/6J m 53.7 117.0   52 16.2 2.17 -350.0, 264.0 -0.07
C57BLKS/J m 61.6 35.7   20 7.99 0.58 13.0, 123.0 0.03
C57BR/cdJ m 185.0 64.0   16 16.0 0.346 74.0, 287.0 1.6
C57L/J m 129.0 158.0   18 37.3 1.23 -141.0, 504.0 0.89
C58/J m 172.0 252.0   16 63.0 1.47 -88.0, 882.0 1.44
CBA/J m 49.4 48.1   20 10.8 0.975 -1.0, 156.0 -0.13
CE/J m 19.6 53.4   18 12.6 2.72 -115.0, 83.0 -0.51
CZECHII/EiJ m 50.1 70.2   18 16.5 1.4 -62.0, 217.0 -0.12
DBA/2J m 33.6 67.7   18 16.0 2.02 -155.0, 121.0 -0.33
DDY/JclSidSeyFrkJ m 113.0 66.8   16 16.7 0.591 27.0, 251.0 0.68
FVB/NJ m 112.0 178.0   20 39.8 1.59 -334.0, 419.0 0.67
I/LnJ m 108.0 59.2   15 15.3 0.546 15.0, 256.0 0.62
KK/HlJ m 80.0 59.1   15 15.2 0.738 9.0, 250.0 0.26
LG/J m 74.2 54.4   19 12.5 0.733 -1.0, 173.0 0.19
LP/J m 5.6 24.1   20 5.38 4.3 -61.0, 73.0 -0.69
MA/MyJ m 156.0 128.0   16 32.1 0.825 -70.0, 339.0 1.23
MOLF/EiJ m 39.0 30.6   16 7.65 0.785 5.0, 95.0 -0.26
MRL/MpJ m 65.2 140.0   19 32.0 2.14 -138.0, 451.0 0.07
MSM/MsJ m -18.8 71.5   18 16.9 -3.8 -197.0, 58.0 -1.0
NOD/ShiLtJ m 101.0 187.0   19 42.9 1.85 -147.0, 434.0 0.53
NON/ShiLtJ m 25.8 115.0   20 25.7 4.46 -168.0, 297.0 -0.43
NOR/LtJ m 136.0 110.0   20 24.6 0.809 -77.0, 371.0 0.98
NZB/BlNJ m 29.3 19.5   18 4.6 0.665 -4.0, 74.0 -0.39
NZO/HlLtJ m -5.0 41.2   16 10.3 -8.25 -110.0, 43.0 -0.82
NZW/LacJ m 26.9 66.9   19 15.3 2.49 -69.0, 203.0 -0.42
PERA/EiJ m 1.47 22.4   15 5.77 15.2 -38.0, 33.0 -0.74
P/J m 108.0 79.7   12 23.0 0.737 -5.0, 254.0 0.62
PL/J m -62.8 93.4   19 21.4 -1.49 -190.0, 176.0 -1.56
PWD/PhJ m -117.0 163.0   15 42.2 -1.4 -444.0, 110.0 -2.25
RIIIS/J m 196.0 68.1   15 17.6 0.347 75.0, 296.0 1.74
SEA/GnJ m 156.0 71.3   15 18.4 0.458 52.0, 288.0 1.23
SJL/J m 27.9 113.0   24 23.1 4.06 -200.0, 343.0 -0.4
SKIVE/EiJ m 38.0 76.2   18 18.0 2.0 -73.0, 206.0 -0.27
SM/J m 230.0 37.3   19 8.56 0.162 156.0, 305.0 2.18
SWR/J m -18.8 202.0   17 49.1 -10.8 -379.0, 342.0 -1.0
TALLYHO/JngJ m -36.8 98.6   16 24.6 -2.68 -245.0, 79.0 -1.23
WSB/EiJ m 38.8 37.3   17 9.05 0.963 -26.0, 132.0 -0.26
ZALENDE/EiJ m -83.1 40.5   17 9.82 -0.488 -153.0, -31.0 -1.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.4 22.1896 43.9574 -43.1574
A/J m 22.3913 20.6919 63.0088 -18.2261
AKR/J m 88.0 22.1896 131.5574 44.4426
BALB/cByJ m 107.8889 23.3899 153.8024 61.9754
BTBR T+ Itpr3tf/J m 35.2632 22.7661 79.9521 -9.4258
BUB/BnJ m 206.7647 24.068 254.0093 159.5201
C3H/HeJ m -64.6 22.1896 -21.0426 -108.1574
C57BL/6J m 53.6923 13.7614 80.7054 26.6792
C57BLKS/J m 61.6 22.1896 105.1574 18.0426
C57BR/cdJ m 184.9375 24.8088 233.6361 136.2389
C57L/J m 128.8333 23.3899 174.7468 82.9198
C58/J m 172.0625 24.8088 220.7611 123.3639
CBA/J m 49.4 22.1896 92.9574 5.8426
CE/J m 19.6111 23.3899 65.5246 -26.3024
CZECHII/EiJ m 50.0556 23.3899 95.9691 4.1421
DBA/2J m 33.5556 23.3899 79.4691 -12.3579
DDY/JclSidSeyFrkJ m 113.0 24.8088 161.6986 64.3014
FVB/NJ m 112.15 22.1896 155.7074 68.5926
I/LnJ m 108.4667 25.6224 158.7624 58.171
KK/HlJ m 80.0 25.6224 130.2957 29.7043
LG/J m 74.2105 22.7661 118.8994 29.5216
LP/J m 5.6 22.1896 49.1574 -37.9574
MA/MyJ m 155.625 24.8088 204.3236 106.9264
MOLF/EiJ m 39.0 24.8088 87.6986 -9.6986
MRL/MpJ m 65.2105 22.7661 109.8994 20.5216
MSM/MsJ m -18.8333 23.3899 27.0802 -64.7468
NOD/ShiLtJ m 100.8421 22.7661 145.531 56.1532
NON/ShiLtJ m 25.8 22.1896 69.3574 -17.7574
NOR/LtJ m 135.85 22.1896 179.4074 92.2926
NZB/BlNJ m 29.3333 23.3899 75.2468 -16.5802
NZO/HlLtJ m -5.0 24.8088 43.6986 -53.6986
NZW/LacJ m 26.8947 22.7661 71.5837 -17.7942
PERA/EiJ m 1.4667 25.6224 51.7624 -48.829
P/J m 108.0833 28.6467 164.3157 51.851
PL/J m -62.7895 22.7661 -18.1006 -107.4784
PWD/PhJ m -117.1333 25.6224 -66.8376 -167.429
RIIIS/J m 196.1333 25.6224 246.429 145.8376
SEA/GnJ m 155.6667 25.6224 205.9624 105.371
SJL/J m 27.9167 20.2563 67.6789 -11.8456
SKIVE/EiJ m 38.0 23.3899 83.9135 -7.9135
SM/J m 229.7895 22.7661 274.4784 185.1006
SWR/J m -18.7647 24.068 28.4799 -66.0093
TALLYHO/JngJ m -36.8125 24.8088 11.8861 -85.5111
WSB/EiJ m 38.7647 24.068 86.0093 -8.4799
ZALENDE/EiJ m -83.0588 24.068 -35.8142 -130.3034




  GWAS USING LINEAR MIXED MODELS