Project measure / variable:   Tarantino1   rear_cocaine

ID, description, units MPD:45922   rear_cocaine   rearing episodes, 30 min test   [n]  treated (day 3)  
cocaine study
Data set, strains Tarantino1   inbred   45 strains     sex: m     age:
Procedure open field test
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  STRAIN COMPARISON PLOT
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Tarantino1 - rearing episodes, 30 min test treated (day 3)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested45 strains
Mean of the strain means95.8   n
Median of the strain means71.2   n
SD of the strain means± 90.7
Coefficient of variation (CV)0.946
Min–max range of strain means0.950   –   368   n
Mean sample size per strain18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 44 6653870.7367 151224.3349 18.6826 < 0.0001
Residuals 793 6418845.1308 8094.3823


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.95 0.224   20 0.05 0.235 -1.05
A/J m 1.48 1.16   23 0.242 0.787 -1.04
AKR/J m 46.9 41.5   20 9.28 0.885 1.0, 135.0 -0.54
BALB/cByJ m 55.8 55.2   18 13.0 0.989 1.0, 155.0 -0.44
BTBR T+ Itpr3tf/J m 9.42 10.1   19 2.31 1.07 1.0, 34.0 -0.95
BUB/BnJ m 71.2 63.5   17 15.4 0.891 1.0, 194.0 -0.27
C3H/HeJ m 242.0 128.0   20 28.6 0.528 30.0, 561.0 1.61
C57BL/6J m 124.0 80.5   52 11.2 0.65 31.0, 389.0 0.31
C57BLKS/J m 26.5 22.0   20 4.91 0.829 -0.76
C57BR/cdJ m 58.2 52.0   16 13.0 0.893 16.0, 231.0 -0.41
C57L/J m 132.0 128.0   18 30.2 0.97 22.0, 484.0 0.4
C58/J m 148.0 138.0   16 34.4 0.932 1.0, 456.0 0.58
CBA/J m 10.5 22.8   20 5.11 2.18 -0.94
CE/J m 107.0 52.5   18 12.4 0.491 21.0, 189.0 0.12
CZECHII/EiJ m 47.0 57.6   18 13.6 1.23 2.0, 246.0 -0.54
DBA/2J m 101.0 119.0   18 28.1 1.17 0.06
DDY/JclSidSeyFrkJ m 16.6 21.2   16 5.3 1.28 1.0, 83.0 -0.87
FVB/NJ m 203.0 162.0   20 36.2 0.798 1.0, 620.0 1.18
I/LnJ m 12.3 15.7   15 4.06 1.28 -0.92
KK/HlJ m 22.2 28.5   15 7.35 1.28 1.0, 100.0 -0.81
LG/J m 12.5 20.8   19 4.77 1.66 1.0, 88.0 -0.92
LP/J m 13.9 37.6   20 8.42 2.71 -0.9
MA/MyJ m 121.0 110.0   16 27.5 0.909 7.0, 359.0 0.28
MOLF/EiJ m 10.1 9.99   16 2.5 0.986 -0.95
MRL/MpJ m 104.0 87.4   19 20.0 0.839 1.0, 260.0 0.09
MSM/MsJ m 111.0 97.3   18 22.9 0.878 1.0, 299.0 0.17
NOD/ShiLtJ m 321.0 164.0   19 37.7 0.511 25.0, 654.0 2.48
NON/ShiLtJ m 211.0 148.0   20 33.1 0.7 21.0, 521.0 1.27
NOR/LtJ m 150.0 125.0   20 28.0 0.835 19.0, 481.0 0.6
NZB/BlNJ m 11.7 10.0   18 2.36 0.859 1.0, 37.0 -0.93
NZO/HlLtJ m 40.7 39.7   16 9.94 0.977 3.0, 134.0 -0.61
NZW/LacJ m 80.3 56.9   19 13.1 0.709 2.0, 265.0 -0.17
PERA/EiJ m 54.9 30.4   15 7.84 0.553 11.0, 121.0 -0.45
P/J m 64.2 38.9   12 11.2 0.606 3.0, 133.0 -0.35
PL/J m 333.0 124.0   19 28.5 0.373 59.0, 535.0 2.62
PWD/PhJ m 186.0 198.0   15 51.0 1.07 1.0, 554.0 0.99
RIIIS/J m 95.8 62.2   15 16.1 0.649 45.0, 283.0 0.0
SEA/GnJ m 43.8 38.2   15 9.85 0.871 1.0, 137.0 -0.57
SJL/J m 104.0 110.0   24 22.4 1.06 2.0, 475.0 0.09
SKIVE/EiJ m 90.7 69.4   18 16.3 0.765 2.0, 252.0 -0.06
SM/J m 47.5 45.6   19 10.5 0.96 1.0, 138.0 -0.53
SWR/J m 368.0 220.0   17 53.3 0.598 58.0, 696.0 3.0
TALLYHO/JngJ m 100.0 110.0   16 27.5 1.1 1.0, 309.0 0.05
WSB/EiJ m 16.9 23.0   17 5.58 1.36 -0.87
ZALENDE/EiJ m 184.0 56.4   17 13.7 0.306 118.0, 300.0 0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.95 20.1176 40.4401 0.0
A/J m 1.4783 18.7598 38.303 0.0
AKR/J m 46.9 20.1176 86.3901 7.4099
BALB/cByJ m 55.8333 21.2058 97.4596 14.2071
BTBR T+ Itpr3tf/J m 9.4211 20.6403 49.937 0.0
BUB/BnJ m 71.2353 21.8206 114.0683 28.4023
C3H/HeJ m 242.35 20.1176 281.8401 202.8599
C57BL/6J m 123.7308 12.4764 148.2215 99.24
C57BLKS/J m 26.5 20.1176 65.9901 0.0
C57BR/cdJ m 58.1875 22.4922 102.3388 14.0362
C57L/J m 132.1667 21.2058 173.7929 90.5404
C58/J m 147.8125 22.4922 191.9638 103.6612
CBA/J m 10.5 20.1176 49.9901 0.0
CE/J m 106.8889 21.2058 148.5151 65.2627
CZECHII/EiJ m 47.0 21.2058 88.6262 5.3738
DBA/2J m 101.3889 21.2058 143.0151 59.7627
DDY/JclSidSeyFrkJ m 16.5625 22.4922 60.7138 0.0
FVB/NJ m 202.95 20.1176 242.4401 163.4599
I/LnJ m 12.2667 23.2298 57.8659 0.0
KK/HlJ m 22.2 23.2298 67.7992 0.0
LG/J m 12.5263 20.6403 53.0423 0.0
LP/J m 13.9 20.1176 53.3901 0.0
MA/MyJ m 121.1875 22.4922 165.3388 77.0362
MOLF/EiJ m 10.125 22.4922 54.2763 0.0
MRL/MpJ m 104.1579 20.6403 144.6739 63.6419
MSM/MsJ m 110.8889 21.2058 152.5151 69.2627
NOD/ShiLtJ m 321.4211 20.6403 361.937 280.9051
NON/ShiLtJ m 211.3 20.1176 250.7901 171.8099
NOR/LtJ m 149.85 20.1176 189.3401 110.3599
NZB/BlNJ m 11.6667 21.2058 53.2929 0.0
NZO/HlLtJ m 40.6875 22.4922 84.8388 0.0
NZW/LacJ m 80.2632 20.6403 120.7792 39.7472
PERA/EiJ m 54.9333 23.2298 100.5326 9.3341
P/J m 64.1667 25.9718 115.1482 13.1852
PL/J m 333.0 20.6403 373.516 292.484
PWD/PhJ m 185.5333 23.2298 231.1326 139.9341
RIIIS/J m 95.8 23.2298 141.3992 50.2008
SEA/GnJ m 43.8 23.2298 89.3992 0.0
SJL/J m 103.5833 18.3648 139.6327 67.534
SKIVE/EiJ m 90.7222 21.2058 132.3484 49.096
SM/J m 47.4737 20.6403 87.9897 6.9577
SWR/J m 367.5294 21.8206 410.3624 324.6964
TALLYHO/JngJ m 100.0625 22.4922 144.2138 55.9112
WSB/EiJ m 16.8824 21.8206 59.7154 0.0
ZALENDE/EiJ m 184.4706 21.8206 227.3036 141.6376




  GWAS USING LINEAR MIXED MODELS