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Project measure / variable:   Donahue17   ratio_wean_born

ID, description, units MPD:44304   ratio_wean_born   ratio of pups weaned to pups born   [ratio]  
Data set, strains Donahue17   BXD   30 strains     sex: f     age: 3-57wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue17 - ratio of pups weaned to pups born



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested30 strains
Mean of the strain means0.847   ratio
Median of the strain means0.850   ratio
SD of the strain means± 0.0900
Coefficient of variation (CV)0.106
Min–max range of strain means0.625   –   1.00   ratio
Mean sample size per strain7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 29 1.8551 0.064 2.3484 0.0003
Residuals 206 5.6114 0.0272


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD11/TyJ f 0.85 0.12   8 0.0423 0.141 0.6, 1.0 0.04
BXD12/TyJ f 0.85 0.169   8 0.0598 0.199 0.6, 1.0 0.04
BXD13/TyJ f 0.862 0.141   8 0.0498 0.163 0.6, 1.0 0.17
BXD14/TyJ f 0.875 0.167   8 0.059 0.191 0.5, 1.0 0.32
BXD15/TyJ f 0.825 0.238   8 0.084 0.288 0.3, 1.0 -0.24
BXD16/TyJ f 0.838 0.22   8 0.0778 0.263 0.5, 1.0 -0.09
BXD18/TyJ f 0.743 0.215   7 0.0812 0.289 0.4, 0.9 -1.15
BXD19/TyJ f 0.837 0.119   8 0.042 0.142 0.7, 1.0 -0.11
BXD1/TyJ f 0.725 0.212   8 0.075 0.293 0.3, 1.0 -1.35
BXD21/TyJ f 0.838 0.177   8 0.0625 0.211 0.5, 1.0 -0.09
BXD22/TyJ f 0.7 0.288   8 0.102 0.411 0.3, 1.0 -1.63
BXD24/TyJ-Cep290rd16/J f 0.843 0.172   7 0.0649 0.204 0.6, 1.0 -0.04
BXD27/TyJ f 0.9 0.129   7 0.0488 0.143 0.7, 1.0 0.59
BXD28/TyJ f 0.957 0.0787   7 0.0297 0.0822 0.8, 1.0 1.23
BXD29-Tlr4lps-2J/J f 0.625 0.243   8 0.0861 0.39 0.3, 1.0 -2.46
BXD29/Ty f 0.963 0.0744   8 0.0263 0.0773 0.8, 1.0 1.29
BXD2/TyJ f 0.862 0.169   8 0.0596 0.195 0.6, 1.0 0.17
BXD31/TyJ f 0.838 0.177   8 0.0625 0.211 0.5, 1.0 -0.09
BXD32/TyJ f 0.875 0.116   8 0.0412 0.133 0.7, 1.0 0.32
BXD33/TyJ f 0.763 0.169   8 0.0596 0.221 0.4, 0.9 -0.93
BXD34/TyJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 1.7
BXD36/TyJ f 0.887 0.173   8 0.0611 0.195 0.5, 1.0 0.45
BXD38/TyJ f 0.7 0.131   8 0.0463 0.187 0.5, 0.9 -1.63
BXD39/TyJ f 0.925 0.0886   8 0.0313 0.0958 0.8, 1.0 0.87
BXD40/TyJ f 0.925 0.0886   8 0.0313 0.0958 0.8, 1.0 0.87
BXD42/TyJ f 0.863 0.119   8 0.042 0.138 0.7, 1.0 0.18
BXD5/TyJ f 0.75 0.193   8 0.0681 0.257 0.4, 1.0 -1.07
BXD6/TyJ f 0.938 0.177   8 0.0625 0.189 0.5, 1.0 1.02
BXD8/TyJ f 0.838 0.192   8 0.068 0.23 0.5, 1.0 -0.09
BXD9/TyJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD11/TyJ f 0.85 0.0584 0.965 0.735
BXD12/TyJ f 0.85 0.0584 0.965 0.735
BXD13/TyJ f 0.8625 0.0584 0.9775 0.7475
BXD14/TyJ f 0.875 0.0584 0.99 0.76
BXD15/TyJ f 0.825 0.0584 0.94 0.71
BXD16/TyJ f 0.8375 0.0584 0.9525 0.7225
BXD18/TyJ f 0.7429 0.0624 0.8658 0.6199
BXD19/TyJ f 0.8375 0.0584 0.9525 0.7225
BXD1/TyJ f 0.725 0.0584 0.84 0.61
BXD21/TyJ f 0.8375 0.0584 0.9525 0.7225
BXD22/TyJ f 0.7 0.0584 0.815 0.585
BXD24/TyJ-Cep290rd16/J f 0.8429 0.0624 0.9658 0.7199
BXD27/TyJ f 0.9 0.0624 1.023 0.777
BXD28/TyJ f 0.9571 0.0624 1.0801 0.8342
BXD29-Tlr4lps-2J/J f 0.625 0.0584 0.74 0.51
BXD29/Ty f 0.9625 0.0584 1.0775 0.8475
BXD2/TyJ f 0.8625 0.0584 0.9775 0.7475
BXD31/TyJ f 0.8375 0.0584 0.9525 0.7225
BXD32/TyJ f 0.875 0.0584 0.99 0.76
BXD33/TyJ f 0.7625 0.0584 0.8775 0.6475
BXD34/TyJ f 1.0 0.0584 1.115 0.885
BXD36/TyJ f 0.8875 0.0584 1.0025 0.7725
BXD38/TyJ f 0.7 0.0584 0.815 0.585
BXD39/TyJ f 0.925 0.0584 1.04 0.81
BXD40/TyJ f 0.925 0.0584 1.04 0.81
BXD42/TyJ f 0.8625 0.0584 0.9775 0.7475
BXD5/TyJ f 0.75 0.0584 0.865 0.635
BXD6/TyJ f 0.9375 0.0584 1.0525 0.8225
BXD8/TyJ f 0.8375 0.0584 0.9525 0.7225
BXD9/TyJ f 1.0 0.0584 1.115 0.885




  GWAS USING LINEAR MIXED MODELS