Project measure / variable:   Donahue12   pct_Fwean

ID, description, units MPD:42107   pct_Fwean   percent females at weaning   [%]  
Data set, strains Donahue12   AXB BXA   28 strains     sex: f     age: 3-50wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue12 - percent females at weaning



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested28 strains
Mean of the strain means45.5   %
Median of the strain means46.4   %
SD of the strain means± 6.49
Coefficient of variation (CV)0.143
Min–max range of strain means32.4   –   57.9   %
Mean sample size per strain7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 8716.9809 322.8511 2.0511 0.0029
Residuals 189 29748.8532 157.4013


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 46.9 8.74   8 3.09 0.186 35.0, 63.0 0.22
AXB12/PgnJ f 53.1 11.2   8 3.95 0.21 42.0, 77.0 1.17
AXB13/PgnJ f 45.9 11.2   7 4.22 0.244 34.0, 67.0 0.06
AXB15/PgnJ f 47.6 8.6   8 3.04 0.181 38.0, 64.0 0.32
AXB19a/PgnJ f 45.0 7.6   8 2.69 0.169 36.0, 58.0 -0.08
AXB19b/PgnJ f 48.5 9.78   8 3.46 0.202 32.0, 66.0 0.46
AXB19/PgnJ f 44.0 8.91   8 3.15 0.203 26.0, 53.0 -0.23
AXB1/PgnJ f 33.7 13.9   7 5.25 0.412 8.0, 50.0 -1.82
AXB23/PgnJ f 45.6 16.5   8 5.82 0.361 23.0, 68.0 0.02
AXB24/PgnJ f 42.1 10.5   9 3.51 0.25 27.0, 62.0 -0.52
AXB2/PgnJ f 32.4 13.8   8 4.9 0.428 10.0, 54.0 -2.02
AXB4/PgnJ f 35.7 18.6   7 7.02 0.52 -1.51
AXB5/PgnJ f 48.0 8.79   6 3.59 0.183 42.0, 65.0 0.39
AXB6/PgnJ f 49.0 10.0   8 3.54 0.204 37.0, 65.0 0.54
AXB8/PgnJ f 48.4 9.35   8 3.31 0.193 29.0, 59.0 0.45
BXA11/PgnJ f 49.4 12.5   8 4.4 0.252 33.0, 72.0 0.6
BXA12/PgnJ f 40.8 7.8   8 2.76 0.191 31.0, 53.0 -0.72
BXA13/PgnJ f 34.1 15.0   8 5.29 0.438 13.0, 59.0 -1.76
BXA14/PgnJ f 45.5 7.35   8 2.6 0.162 32.0, 56.0 0.0
BXA16/PgnJ f 52.0 17.6   5 7.87 0.339 33.0, 79.0 1.0
BXA1/PgnJ f 57.9 20.9   8 7.4 0.361 33.0, 100.0 1.91
BXA24/PgnJ f 49.8 6.54   8 2.31 0.131 38.0, 57.0 0.66
BXA25/PgnJ f 50.2 5.68   8 2.01 0.113 43.0, 58.0 0.73
BXA26/PgnJ f 51.6 21.1   8 7.45 0.408 29.0, 100.0 0.94
BXA2/PgnJ f 39.0 10.0   8 3.55 0.258 22.0, 58.0 -1.0
BXA4/PgnJ f 39.0 13.0   8 4.61 0.335 17.0, 56.0 -1.0
BXA7/PgnJ f 54.8 12.2   8 4.33 0.224 33.0, 75.0 1.43
BXA8/PgnJ f 43.8 17.1   8 6.05 0.391 19.0, 74.0 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 46.875 4.4357 55.6248 38.1252
AXB12/PgnJ f 53.125 4.4357 61.8748 44.3752
AXB13/PgnJ f 45.8571 4.7419 55.2111 36.5032
AXB15/PgnJ f 47.625 4.4357 56.3748 38.8752
AXB19a/PgnJ f 45.0 4.4357 53.7498 36.2502
AXB19b/PgnJ f 48.5 4.4357 57.2498 39.7502
AXB19/PgnJ f 44.0 4.4357 52.7498 35.2502
AXB1/PgnJ f 33.7143 4.7419 43.0682 24.3604
AXB23/PgnJ f 45.625 4.4357 54.3748 36.8752
AXB24/PgnJ f 42.1111 4.182 50.3605 33.8617
AXB2/PgnJ f 32.375 4.4357 41.1248 23.6252
AXB4/PgnJ f 35.7143 4.7419 45.0682 26.3604
AXB5/PgnJ f 48.0 5.1219 58.1034 37.8966
AXB6/PgnJ f 49.0 4.4357 57.7498 40.2502
AXB8/PgnJ f 48.375 4.4357 57.1248 39.6252
BXA11/PgnJ f 49.375 4.4357 58.1248 40.6252
BXA12/PgnJ f 40.75 4.4357 49.4998 32.0002
BXA13/PgnJ f 34.125 4.4357 42.8748 25.3752
BXA14/PgnJ f 45.5 4.4357 54.2498 36.7502
BXA16/PgnJ f 52.0 5.6107 63.0677 40.9323
BXA1/PgnJ f 57.875 4.4357 66.6248 49.1252
BXA24/PgnJ f 49.75 4.4357 58.4998 41.0002
BXA25/PgnJ f 50.25 4.4357 58.9998 41.5002
BXA26/PgnJ f 51.625 4.4357 60.3748 42.8752
BXA2/PgnJ f 39.0 4.4357 47.7498 30.2502
BXA4/PgnJ f 39.0 4.4357 47.7498 30.2502
BXA7/PgnJ f 54.75 4.4357 63.4998 46.0002
BXA8/PgnJ f 43.75 4.4357 52.4998 35.0002




  GWAS USING LINEAR MIXED MODELS