Project measure / variable:   Donahue12   litter_interval

ID, description, units MPD:42102   litter_interval   mean litter interval   [wks]  
Data set, strains Donahue12   AXB BXA   28 strains     sex: f     age: 3-50wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue12 - mean litter interval



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested28 strains
Mean of the strain means4.67   wks
Median of the strain means4.74   wks
SD of the strain means± 0.541
Coefficient of variation (CV)0.116
Min–max range of strain means3.71   –   5.73   wks
Mean sample size per strain7.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 59.1538 2.1909 1.6416 0.0307
Residuals 182 242.8901 1.3346


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 4.8 2.4   8 0.848 0.5 3.2, 10.6 0.24
AXB12/PgnJ f 5.35 1.23   8 0.435 0.23 3.6, 7.3 1.26
AXB13/PgnJ f 3.97 1.12   6 0.458 0.283 3.0, 6.0 -1.3
AXB15/PgnJ f 5.05 1.28   8 0.454 0.254 3.7, 6.7 0.7
AXB19a/PgnJ f 4.95 1.28   8 0.452 0.258 3.1, 6.8 0.52
AXB19b/PgnJ f 4.76 1.3   8 0.461 0.274 3.8, 7.8 0.16
AXB19/PgnJ f 4.05 0.763   8 0.27 0.189 3.2, 5.4 -1.15
AXB1/PgnJ f 5.73 1.5   6 0.612 0.261 3.8, 7.6 1.96
AXB23/PgnJ f 4.73 1.14   7 0.432 0.242 3.3, 6.3 0.11
AXB24/PgnJ f 5.31 0.836   9 0.279 0.157 4.0, 6.7 1.18
AXB2/PgnJ f 3.71 0.783   8 0.277 0.211 3.0, 5.5 -1.78
AXB4/PgnJ f 4.94 1.78   7 0.674 0.361 3.5, 8.4 0.5
AXB5/PgnJ f 4.5 0.956   4 0.478 0.212 3.1, 5.2 -0.32
AXB6/PgnJ f 5.68 1.5   8 0.531 0.265 3.4, 7.9 1.87
AXB8/PgnJ f 4.23 0.483   8 0.171 0.114 3.6, 4.8 -0.82
BXA11/PgnJ f 4.83 1.89   8 0.669 0.392 3.2, 9.0 0.29
BXA12/PgnJ f 3.9 0.444   8 0.157 0.114 3.4, 4.7 -1.43
BXA13/PgnJ f 4.74 0.955   8 0.338 0.201 3.6, 6.5 0.13
BXA14/PgnJ f 4.46 0.644   8 0.228 0.144 3.8, 5.8 -0.39
BXA16/PgnJ f 4.44 0.635   5 0.284 0.143 3.8, 5.2 -0.43
BXA1/PgnJ f 3.87 0.848   7 0.321 0.219 3.2, 5.6 -1.48
BXA24/PgnJ f 5.31 0.993   8 0.351 0.187 3.5, 6.5 1.18
BXA25/PgnJ f 4.99 0.743   8 0.263 0.149 3.9, 6.0 0.59
BXA26/PgnJ f 4.21 0.71   8 0.251 0.169 3.1, 5.3 -0.85
BXA2/PgnJ f 4.31 0.948   8 0.335 0.22 3.2, 5.8 -0.67
BXA4/PgnJ f 4.49 1.02   8 0.359 0.226 3.3, 6.7 -0.34
BXA7/PgnJ f 4.37 0.761   7 0.288 0.174 3.4, 5.5 -0.56
BXA8/PgnJ f 5.11 0.894   8 0.316 0.175 4.0, 6.1 0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 4.8 0.4084 5.6059 3.9941
AXB12/PgnJ f 5.35 0.4084 6.1559 4.5441
AXB13/PgnJ f 3.9667 0.4716 4.8972 3.0361
AXB15/PgnJ f 5.05 0.4084 5.8559 4.2441
AXB19a/PgnJ f 4.95 0.4084 5.7559 4.1441
AXB19b/PgnJ f 4.7625 0.4084 5.5684 3.9566
AXB19/PgnJ f 4.05 0.4084 4.8559 3.2441
AXB1/PgnJ f 5.7333 0.4716 6.6639 4.8028
AXB23/PgnJ f 4.7286 0.4366 5.5901 3.8671
AXB24/PgnJ f 5.3111 0.3851 6.0709 4.5513
AXB2/PgnJ f 3.7125 0.4084 4.5184 2.9066
AXB4/PgnJ f 4.9429 0.4366 5.8044 4.0813
AXB5/PgnJ f 4.5 0.5776 5.6397 3.3603
AXB6/PgnJ f 5.675 0.4084 6.4809 4.8691
AXB8/PgnJ f 4.225 0.4084 5.0309 3.4191
BXA11/PgnJ f 4.825 0.4084 5.6309 4.0191
BXA12/PgnJ f 3.9 0.4084 4.7059 3.0941
BXA13/PgnJ f 4.7375 0.4084 5.5434 3.9316
BXA14/PgnJ f 4.4625 0.4084 5.2684 3.6566
BXA16/PgnJ f 4.44 0.5166 5.4594 3.4206
BXA1/PgnJ f 3.8714 0.4366 4.7329 3.0099
BXA24/PgnJ f 5.3125 0.4084 6.1184 4.5066
BXA25/PgnJ f 4.9875 0.4084 5.7934 4.1816
BXA26/PgnJ f 4.2125 0.4084 5.0184 3.4066
BXA2/PgnJ f 4.3125 0.4084 5.1184 3.5066
BXA4/PgnJ f 4.4875 0.4084 5.2934 3.6816
BXA7/PgnJ f 4.3714 0.4366 5.2329 3.5099
BXA8/PgnJ f 5.1125 0.4084 5.9184 4.3066




  GWAS USING LINEAR MIXED MODELS