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Project measure / variable:   Donahue6   pct_NEUT

ID, description, units MPD:41501   pct_NEUT   neutrophil differential (percentage of viable WBC)   [%]  
Data set, strains Donahue6   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Donahue6 - neutrophil differential (percentage of viable WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means9.08   % 11.4   %
Median of the strain means7.92   % 9.57   %
SD of the strain means± 5.40 ± 5.91
Coefficient of variation (CV)0.595 0.519
Min–max range of strain means0.236   –   24.1   % 1.14   –   28.8   %
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 610.9377 610.9377 23.6889 < 0.0001
strain 27 11087.9949 410.6665 15.9234 < 0.0001
sex:strain 27 3070.5377 113.7236 4.4096 < 0.0001
Residuals 419 10806.034 25.7901


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 12.8 4.15   8 1.47 0.324 7.41, 18.6 0.69
B6.PWD-Chr1 m 11.6 3.24   8 1.14 0.278 8.43, 16.1 0.03
B6.PWD-Chr10.1 f 11.1 4.43   11 1.34 0.401 5.49, 18.7 0.37
B6.PWD-Chr10.1 m 15.8 11.8   8 4.18 0.75 4.63, 33.4 0.74
B6.PWD-Chr10.2 f 7.07 1.55   8 0.547 0.219 4.79, 9.1 -0.37
B6.PWD-Chr10.2 m 7.13 1.86   8 0.659 0.261 4.51, 9.76 -0.72
B6.PWD-Chr10.3 f 3.31 2.88   8 1.02 0.871 0.71, 7.87 -1.07
B6.PWD-Chr10.3 m 7.11 2.49   8 0.881 0.351 1.56, 8.78 -0.73
B6.PWD-Chr11.1 f 8.76 4.12   12 1.19 0.471 1.07, 14.0 -0.06
B6.PWD-Chr11.1 m 10.1 4.62   12 1.33 0.457 1.83, 16.1 -0.22
B6.PWD-Chr11.2 f 7.0 4.86   9 1.62 0.695 0.63, 14.7 -0.39
B6.PWD-Chr11.2 m 15.9 6.13   10 1.94 0.385 0.98, 23.7 0.76
B6.PWD-Chr11.3 f 7.42 2.66   8 0.939 0.358 4.14, 12.6 -0.31
B6.PWD-Chr11.3 m 8.49 5.72   10 1.81 0.674 3.82, 20.5 -0.49
B6.PWD-Chr12 f 8.46 4.3   8 1.52 0.508 4.43, 14.9 -0.12
B6.PWD-Chr12 m 9.77 5.25   8 1.85 0.537 4.94, 17.0 -0.28
B6.PWD-Chr13 f 6.2 2.77   8 0.98 0.447 3.16, 11.3 -0.53
B6.PWD-Chr13 m 7.31 4.28   9 1.43 0.585 4.45, 18.4 -0.69
B6.PWD-Chr14 f 6.11 2.28   8 0.805 0.373 1.34, 8.12 -0.55
B6.PWD-Chr14 m 6.74 1.28   10 0.405 0.19 4.92, 9.46 -0.79
B6.PWD-Chr15 f 15.0 8.63   7 3.26 0.577 4.01, 26.9 1.1
B6.PWD-Chr15 m 10.1 4.47   8 1.58 0.443 4.07, 15.4 -0.22
B6.PWD-Chr16 f 6.5 2.24   8 0.792 0.345 3.2, 10.1 -0.48
B6.PWD-Chr16 m 6.15 1.89   8 0.667 0.306 4.61, 10.2 -0.89
B6.PWD-Chr17 f 0.236 0.116   8 0.0409 0.49 0.12, 0.48 -1.64
B6.PWD-Chr17 m 18.5 8.19   8 2.89 0.441 8.93, 31.9 1.2
B6.PWD-Chr18 f 0.968 0.267   8 0.0945 0.276 0.59, 1.43 -1.5
B6.PWD-Chr18 m 1.14 0.28   8 0.099 0.247 0.78, 1.68 -1.73
B6.PWD-Chr19 f 11.8 4.66   8 1.65 0.396 6.94, 22.5 0.5
B6.PWD-Chr19 m 11.3 1.15   7 0.435 0.102 9.84, 12.9 -0.02
B6.PWD-Chr2 f 11.9 5.4   10 1.71 0.454 3.77, 24.3 0.52
B6.PWD-Chr2 m 20.8 6.11   8 2.16 0.294 12.9, 30.2 1.59
B6.PWD-Chr3 f 10.4 5.16   8 1.82 0.497 0.24
B6.PWD-Chr3 m 20.0 5.92   8 2.09 0.296 14.9, 32.6 1.45
B6.PWD-Chr5 f 9.12 2.88   8 1.02 0.316 5.61, 13.5 0.01
B6.PWD-Chr5 m 6.93 4.19   8 1.48 0.605 1.04, 13.6 -0.76
B6.PWD-Chr6 f 22.1 8.5   8 3.01 0.384 10.6, 34.2 2.41
B6.PWD-Chr6 m 17.2 7.67   8 2.71 0.447 1.24, 26.1 0.98
B6.PWD-Chr8 f 7.21 3.1   5 1.38 0.429 3.84, 10.5 -0.35
B6.PWD-Chr8 m 8.62 3.56   5 1.59 0.413 4.99, 13.6 -0.47
B6.PWD-Chr9 f 8.13 3.97   8 1.4 0.489 1.59, 15.1 -0.18
B6.PWD-Chr9 m 11.1 4.59   8 1.62 0.415 5.85, 18.2 -0.05
B6.PWD-ChrX.1 f 8.3 7.34   8 2.59 0.884 0.63, 24.2 -0.15
B6.PWD-ChrX.1 m 8.94 5.77   7 2.18 0.645 4.7, 18.5 -0.42
B6.PWD-ChrX.2 f 7.71 2.33   8 0.824 0.302 5.52, 11.9 -0.25
B6.PWD-ChrX.2 m 17.9 3.6   9 1.2 0.201 13.5, 23.8 1.1
B6.PWD-ChrX.3 f 16.8 5.18   8 1.83 0.308 8.57, 25.1 1.43
B6.PWD-ChrX.3 m 9.37 11.8   8 4.18 1.26 0.6, 27.7 -0.34
B6.PWD-ChrY f 5.79 5.93   8 2.1 1.02 1.4, 16.7 -0.61
B6.PWD-ChrY m 8.23 7.18   8 2.54 0.873 1.86, 19.7 -0.54
B6.PWD-mt f 4.83 4.43   7 1.68 0.918 1.11, 10.4 -0.79
B6.PWD-mt m 8.8 5.87   8 2.08 0.667 1.47, 17.8 -0.44
C57BL/6J f 5.23 3.13   16 0.783 0.599 1.7, 11.1 -0.71
C57BL/6J m 5.38 3.65   16 0.914 0.68 1.2, 11.8 -1.02
PWD/PhJ f 24.1 4.13   7 1.56 0.171 17.7, 28.7 2.78
PWD/PhJ m 28.8 8.02   8 2.84 0.278 18.1, 43.8 2.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 12.825 1.7955 16.3543 9.2957
B6.PWD-Chr1 m 11.6337 1.7955 15.163 8.1045
B6.PWD-Chr10.1 f 11.0682 1.5312 14.078 8.0584
B6.PWD-Chr10.1 m 15.75 1.7955 19.2793 12.2207
B6.PWD-Chr10.2 f 7.07 1.7955 10.5993 3.5407
B6.PWD-Chr10.2 m 7.13 1.7955 10.6593 3.6007
B6.PWD-Chr10.3 f 3.31 1.7955 6.8393 0.0
B6.PWD-Chr10.3 m 7.1062 1.7955 10.6355 3.577
B6.PWD-Chr11.1 f 8.7592 1.466 11.6408 5.8775
B6.PWD-Chr11.1 m 10.1075 1.466 12.9891 7.2259
B6.PWD-Chr11.2 f 6.9967 1.6928 10.3241 3.6692
B6.PWD-Chr11.2 m 15.928 1.6059 19.0847 12.7713
B6.PWD-Chr11.3 f 7.4162 1.7955 10.9455 3.887
B6.PWD-Chr11.3 m 8.489 1.6059 11.6457 5.3323
B6.PWD-Chr12 f 8.46 1.7955 11.9893 4.9307
B6.PWD-Chr12 m 9.7675 1.7955 13.2968 6.2382
B6.PWD-Chr13 f 6.2025 1.7955 9.7318 2.6732
B6.PWD-Chr13 m 7.31 1.6928 10.6374 3.9826
B6.PWD-Chr14 f 6.1075 1.7955 9.6368 2.5782
B6.PWD-Chr14 m 6.736 1.6059 9.8927 3.5793
B6.PWD-Chr15 f 14.9543 1.9195 18.7272 11.1813
B6.PWD-Chr15 m 10.0888 1.7955 13.618 6.5595
B6.PWD-Chr16 f 6.5025 1.7955 10.0318 2.9732
B6.PWD-Chr16 m 6.1525 1.7955 9.6818 2.6232
B6.PWD-Chr17 f 0.2362 1.7955 3.7655 0.0
B6.PWD-Chr17 m 18.5412 1.7955 22.0705 15.012
B6.PWD-Chr18 f 0.9675 1.7955 4.4968 0.0
B6.PWD-Chr18 m 1.135 1.7955 4.6643 0.0
B6.PWD-Chr19 f 11.7587 1.7955 15.288 8.2295
B6.PWD-Chr19 m 11.3057 1.9195 15.0787 7.5328
B6.PWD-Chr2 f 11.892 1.6059 15.0487 8.7353
B6.PWD-Chr2 m 20.8125 1.7955 24.3418 17.2832
B6.PWD-Chr3 f 10.3737 1.7955 13.903 6.8445
B6.PWD-Chr3 m 19.9875 1.7955 23.5168 16.4582
B6.PWD-Chr5 f 9.12 1.7955 12.6493 5.5907
B6.PWD-Chr5 m 6.9263 1.7955 10.4555 3.397
B6.PWD-Chr6 f 22.1375 1.7955 25.6668 18.6082
B6.PWD-Chr6 m 17.155 1.7955 20.6843 13.6257
B6.PWD-Chr8 f 7.208 2.2711 11.6722 2.7438
B6.PWD-Chr8 m 8.62 2.2711 13.0842 4.1558
B6.PWD-Chr9 f 8.1288 1.7955 11.658 4.5995
B6.PWD-Chr9 m 11.06 1.7955 14.5893 7.5307
B6.PWD-ChrX.1 f 8.2987 1.7955 11.828 4.7695
B6.PWD-ChrX.1 m 8.9414 1.9195 12.7144 5.1685
B6.PWD-ChrX.2 f 7.71 1.7955 11.2393 4.1807
B6.PWD-ChrX.2 m 17.9222 1.6928 21.2497 14.5948
B6.PWD-ChrX.3 f 16.8462 1.7955 20.3755 13.317
B6.PWD-ChrX.3 m 9.3675 1.7955 12.8968 5.8382
B6.PWD-ChrY f 5.79 1.7955 9.3193 2.2607
B6.PWD-ChrY m 8.2313 1.7955 11.7605 4.702
B6.PWD-mt f 4.83 1.9195 8.603 1.057
B6.PWD-mt m 8.805 1.7955 12.3343 5.2757
C57BL/6J f 5.2306 1.2696 7.7262 2.7351
C57BL/6J m 5.3781 1.2696 7.8737 2.8826
PWD/PhJ f 24.1 1.9195 27.873 20.327
PWD/PhJ m 28.8375 1.7955 32.3668 25.3082


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 12.2294 1.2696 14.7249 9.7338
B6.PWD-Chr10.1 both 13.4091 1.1799 15.7283 11.0899
B6.PWD-Chr10.2 both 7.1 1.2696 9.5956 4.6044
B6.PWD-Chr10.3 both 5.2081 1.2696 7.7037 2.7126
B6.PWD-Chr11.1 both 9.4333 1.0366 11.471 7.3957
B6.PWD-Chr11.2 both 11.4623 1.1667 13.7556 9.1691
B6.PWD-Chr11.3 both 7.9526 1.2044 10.3201 5.5851
B6.PWD-Chr12 both 9.1138 1.2696 11.6093 6.6182
B6.PWD-Chr13 both 6.7563 1.2338 9.1815 4.331
B6.PWD-Chr14 both 6.4218 1.2044 8.7893 4.0542
B6.PWD-Chr15 both 12.5215 1.3142 15.1047 9.9384
B6.PWD-Chr16 both 6.3275 1.2696 8.8231 3.8319
B6.PWD-Chr17 both 9.3887 1.2696 11.8843 6.8932
B6.PWD-Chr18 both 1.0512 1.2696 3.5468 0.0
B6.PWD-Chr19 both 11.5322 1.3142 14.1154 8.9491
B6.PWD-Chr2 both 16.3523 1.2044 18.7198 13.9847
B6.PWD-Chr3 both 15.1806 1.2696 17.6762 12.6851
B6.PWD-Chr5 both 8.0231 1.2696 10.5187 5.5276
B6.PWD-Chr6 both 19.6462 1.2696 22.1418 17.1507
B6.PWD-Chr8 both 7.914 1.6059 11.0707 4.7573
B6.PWD-Chr9 both 9.5944 1.2696 12.0899 7.0988
B6.PWD-ChrX.1 both 8.6201 1.3142 11.2033 6.0369
B6.PWD-ChrX.2 both 12.8161 1.2338 15.2414 10.3908
B6.PWD-ChrX.3 both 13.1069 1.2696 15.6024 10.6113
B6.PWD-ChrY both 7.0106 1.2696 9.5062 4.5151
B6.PWD-mt both 6.8175 1.3142 9.4007 4.2343
C57BL/6J both 5.3044 0.8977 7.069 3.5397
PWD/PhJ both 26.4687 1.3142 29.0519 23.8856




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA