Project measure / variable:   Crowley1   overtchew_d60

ID, description, units MPD:39435   overtchew_d60   overt chewing movements, 15 min test   [n]  on day 60  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure behavior observation
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  STRAIN COMPARISON PLOT
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Crowley1 - overt chewing movements, 15 min test on day 60



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means60.0   n
Median of the strain means48.0   n
SD of the strain means± 41.4
Coefficient of variation (CV)0.689
Min–max range of strain means2.12   –   143   n
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 236404.9152 9092.4967 4.0037 < 0.0001
Residuals 130 295232.2567 2271.0174


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 20.5 30.5   8 10.8 1.49 1.0, 80.0 -0.96
A/J m 71.0 34.4   5 15.4 0.485 20.0, 113.0 0.26
AKR/J m 57.8 41.2   5 18.4 0.712 9.0, 115.0 -0.05
BALB/cByJ m 45.2 47.2   4 23.6 1.04 7.0, 104.0 -0.36
BTBR T+ Itpr3tf/J m 2.12 4.82   8 1.71 2.27 -1.4
C3H/HeJ m 143.0 92.6   4 46.3 0.647 5.0, 203.0 2.01
C57BL/6J m 41.0 52.9   5 23.6 1.29 -0.46
C57BLKS/J m 129.0 83.6   5 37.4 0.647 16.0, 252.0 1.67
CAST/EiJ m 117.0 75.6   5 33.8 0.647 31.0, 193.0 1.38
CBA/J m 97.2 93.6   5 41.9 0.963 10.0, 245.0 0.9
DBA/2J m 68.8 35.7   9 11.9 0.52 18.0, 150.0 0.21
DDY/JclSidSeyFrkJ m 76.7 70.0   7 26.4 0.912 6.0, 197.0 0.4
FVB/NJ m 142.0 70.2   5 31.4 0.493 82.0, 263.0 1.98
KK/HlJ m 40.6 25.5   7 9.64 0.629 9.0, 79.0 -0.47
MA/MyJ m 10.3 12.3   6 5.01 1.19 1.0, 34.0 -1.2
MOLF/EiJ m 13.6 6.77   5 3.03 0.498 3.0, 21.0 -1.12
MRL/MpJ m 19.8 16.5   5 7.37 0.832 3.0, 40.0 -0.97
MSM/MsJ m 48.0 34.5   6 14.1 0.719 12.0, 90.0 -0.29
NOD/ShiLtJ m 19.6 17.8   5 7.95 0.907 1.0, 48.0 -0.98
NON/ShiLtJ m 64.2 33.8   8 12.0 0.527 13.0, 123.0 0.1
NZL/LtJ m 26.5 22.3   8 7.87 0.84 8.0, 67.0 -0.81
NZO/HlLtJ m 24.0 8.98   4 4.49 0.374 15.0, 34.0 -0.87
NZW/LacJ m 37.6 35.2   5 15.7 0.936 2.0, 78.0 -0.54
PWK/PhJ m 37.4 16.0   5 7.15 0.428 10.0, 51.0 -0.55
SJL/J m 116.0 101.0   5 45.2 0.87 3.0, 237.0 1.35
SM/J m 75.8 47.5   8 16.8 0.627 32.0, 172.0 0.38
WSB/EiJ m 76.4 13.4   5 5.98 0.175 65.0, 99.0 0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 20.5 16.8487 53.833 0.0
A/J m 71.0 21.312 113.1633 28.8367
AKR/J m 57.8 21.312 99.9633 15.6367
BALB/cByJ m 45.25 23.8276 92.39 0.0
BTBR T+ Itpr3tf/J m 2.125 16.8487 35.458 0.0
C3H/HeJ m 143.0 23.8276 190.14 95.86
C57BL/6J m 41.0 21.312 83.1633 0.0
C57BLKS/J m 129.2 21.312 171.3633 87.0367
CAST/EiJ m 116.8 21.312 158.9633 74.6367
CBA/J m 97.2 21.312 139.3633 55.0367
DBA/2J m 68.7778 15.8851 100.2045 37.3511
DDY/JclSidSeyFrkJ m 76.7143 18.012 112.3488 41.0798
FVB/NJ m 142.2 21.312 184.3633 100.0367
KK/HlJ m 40.5714 18.012 76.206 4.9369
MA/MyJ m 10.3333 19.4552 48.823 0.0
MOLF/EiJ m 13.6 21.312 55.7633 0.0
MRL/MpJ m 19.8 21.312 61.9633 0.0
MSM/MsJ m 48.0 19.4552 86.4897 9.5103
NOD/ShiLtJ m 19.6 21.312 61.7633 0.0
NON/ShiLtJ m 64.25 16.8487 97.583 30.917
NZL/LtJ m 26.5 16.8487 59.833 0.0
NZO/HlLtJ m 24.0 23.8276 71.14 0.0
NZW/LacJ m 37.6 21.312 79.7633 0.0
PWK/PhJ m 37.4 21.312 79.5633 0.0
SJL/J m 116.2 21.312 158.3633 74.0367
SM/J m 75.75 16.8487 109.083 42.417
WSB/EiJ m 76.4 21.312 118.5633 34.2367




  GWAS USING LINEAR MIXED MODELS