Project measure / variable:   Crowley1   horizontal_actd60

ID, description, units MPD:39414   horizontal_actd60   distance traveled, 60 min test   [cm]  on day 60  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Crowley1 - distance traveled, 60 min test on day 60



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means3234   cm
Median of the strain means2761   cm
SD of the strain means± 2411
Coefficient of variation (CV)0.746
Min–max range of strain means525   –   10292   cm
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 835467830.323 32133378.0893 11.3311 < 0.0001
Residuals 131 371496173.4238 2835848.6521


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 663.0 696.0   8 246.0 1.05 16.0, 2215.0 -1.07
A/J m 618.0 299.0   5 134.0 0.484 367.0, 1075.0 -1.08
AKR/J m 2800.0 182.0   5 81.2 0.0649 2502.0, 2956.0 -0.18
BALB/cByJ m 3283.0 2440.0   4 1220.0 0.743 787.0, 6549.0 0.02
BTBR T+ Itpr3tf/J m 1377.0 772.0   8 273.0 0.561 330.0, 2654.0 -0.77
C3H/HeJ m 1390.0 678.0   5 303.0 0.488 672.0, 2340.0 -0.76
C57BL/6J m 2385.0 790.0   5 353.0 0.331 1535.0, 3651.0 -0.35
C57BLKS/J m 1356.0 697.0   5 312.0 0.514 510.0, 2441.0 -0.78
CAST/EiJ m 10292.0 1207.0   5 540.0 0.117 8902.0, 11470.0 2.93
CBA/J m 2021.0 406.0   5 182.0 0.201 1586.0, 2623.0 -0.5
DBA/2J m 4251.0 1624.0   9 541.0 0.382 2146.0, 7156.0 0.42
DDY/JclSidSeyFrkJ m 2293.0 993.0   7 375.0 0.433 1232.0, 3729.0 -0.39
FVB/NJ m 7010.0 2513.0   5 1124.0 0.359 3747.0, 9109.0 1.57
KK/HlJ m 1627.0 1145.0   7 433.0 0.704 798.0, 4164.0 -0.67
MA/MyJ m 4682.0 1452.0   6 593.0 0.31 2907.0, 6293.0 0.6
MOLF/EiJ m 2761.0 1196.0   5 535.0 0.433 1233.0, 4181.0 -0.2
MRL/MpJ m 1728.0 615.0   5 275.0 0.356 1144.0, 2513.0 -0.62
MSM/MsJ m 3139.0 4293.0   6 1753.0 1.37 341.0, 11175.0 -0.04
NOD/ShiLtJ m 6560.0 1558.0   5 697.0 0.237 4476.0, 8196.0 1.38
NON/ShiLtJ m 3663.0 1661.0   8 587.0 0.453 973.0, 6268.0 0.18
NZL/LtJ m 981.0 315.0   8 111.0 0.321 413.0, 1389.0 -0.93
NZO/HlLtJ m 525.0 220.0   4 110.0 0.419 215.0, 725.0 -1.12
NZW/LacJ m 558.0 228.0   5 102.0 0.409 336.0, 942.0 -1.11
PWK/PhJ m 5657.0 2626.0   5 1175.0 0.464 2681.0, 9274.0 1.0
SJL/J m 3861.0 904.0   5 404.0 0.234 2627.0, 5070.0 0.26
SM/J m 6291.0 3692.0   8 1305.0 0.587 4086.0, 15151.0 1.27
WSB/EiJ m 5548.0 1266.0   5 566.0 0.228 4208.0, 7483.0 0.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 663.0 595.3831 1840.8099 0.0
A/J m 618.4 753.1067 2108.2247 0.0
AKR/J m 2800.0 753.1067 4289.8247 1310.1753
BALB/cByJ m 3283.25 841.9989 4948.9247 1617.5753
BTBR T+ Itpr3tf/J m 1376.625 595.3831 2554.4349 198.8151
C3H/HeJ m 1389.6 753.1067 2879.4247 0.0
C57BL/6J m 2384.6 753.1067 3874.4247 894.7753
C57BLKS/J m 1355.8 753.1067 2845.6247 0.0
CAST/EiJ m 10292.4 753.1067 11782.2247 8802.5753
CBA/J m 2020.8 753.1067 3510.6247 530.9753
DBA/2J m 4251.3333 561.3326 5361.7831 3140.8835
DDY/JclSidSeyFrkJ m 2292.8571 636.4913 3551.9889 1033.7254
FVB/NJ m 7009.8 753.1067 8499.6247 5519.9753
KK/HlJ m 1627.0 636.4913 2886.1317 367.8683
MA/MyJ m 4682.1667 687.4892 6042.1844 3322.149
MOLF/EiJ m 2761.4 753.1067 4251.2247 1271.5753
MRL/MpJ m 1727.8 753.1067 3217.6247 237.9753
MSM/MsJ m 3138.6667 687.4892 4498.6844 1778.649
NOD/ShiLtJ m 6560.4 753.1067 8050.2247 5070.5753
NON/ShiLtJ m 3663.125 595.3831 4840.9349 2485.3151
NZL/LtJ m 981.125 595.3831 2158.9349 0.0
NZO/HlLtJ m 524.75 841.9989 2190.4247 0.0
NZW/LacJ m 558.0 753.1067 2047.8247 0.0
PWK/PhJ m 5656.6 753.1067 7146.4247 4166.7753
SJL/J m 3861.0 753.1067 5350.8247 2371.1753
SM/J m 6291.125 595.3831 7468.9349 5113.3151
WSB/EiJ m 5547.8 753.1067 7037.6247 4057.9753




  GWAS USING LINEAR MIXED MODELS