Project measure / variable:   Schughart1   susceptibility

ID, description, units MPD:39305   susceptibility   susceptibility to viral infection (0=susceptible; 1=resistant)   [designation]  
influenza A (H1N1) virus study
Data set, strains Schughart1   inbred   9 strains     sex: both     age: 10-12wks
Procedure health assessment
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  STRAIN COMPARISON PLOT
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Schughart1 - susceptibility to viral infection (0=susceptible; 1=resistant)



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested9 strains
Mean of the strain means0.667   designation
Median of the strain means1.00   designation
SD of the strain means± 0.500
Coefficient of variation (CV)0.750
Min–max range of strain means0   –   1.00   designation
Mean sample size per strain10.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0087 0.0087 1.71455912300667e+29 < 0.0001
strain 1 16.4762 16.4762 3.2628060110817e+32 < 0.0001
sex:strain 1 0.0 0.0 0.2437 0.6233
Residuals 62 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/JOlaHsd f 0.0 0.0   9 0.0 0.0 -1.33
B6D2F1/J f 1.0 0.0   11 0.0 0.0 1.0, 1.0 0.67
BALB/cByJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.67
C57BL/6J f 1.0 0.0   22 0.0 0.0 1.0, 1.0 0.67
CBA/J f 1.0 0.0   9 0.0 0.0 1.0, 1.0 0.67
DBA/2J f 0.0 0.0   20 0.0 0.0 -1.33
DBA/2NHsd f 0.0 0.0   7 0.0 0.0 -1.33
FVB/NJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.67
SJL/JOrlCrl f 1.0 0.0   7 0.0 0.0 1.0, 1.0 0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
C57BL/6J f 1.0 0.0 1.0 1.0
C57BL/6J m 1.0 0.0 1.0 1.0
DBA/2J f 0.0 0.0 0.0 0.0
DBA/2J m 0.0 0.0 0.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
C57BL/6J both 1.0 0.0 1.0 1.0
DBA/2J both 0.0 0.0 0.0 0.0




  GWAS USING LINEAR MIXED MODELS