Project measure / variable:   Jaxpheno7   transfer_arousal

ID, description, units MPD:34907   transfer_arousal   transfer (view-jar to arena) provoked response (score 0-4)   [score]  
Data set, strains Jaxpheno7   inbred   6 strains     sex: m     age: 10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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Jaxpheno7 - transfer (view-jar to arena) provoked response (score 0-4)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means1.44   score
Median of the strain means1.48   score
SD of the strain means± 0.287
Coefficient of variation (CV)0.199
Min–max range of strain means1.00   –   1.73   score
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 3.1301 0.626 2.9419 0.0221
Residuals 45 9.5758 0.2128


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 1.0 0.0   6 0.0 0.0 1.0, 1.0 -1.53
AKR/J m 1.64 0.505   11 0.152 0.308 1.0, 2.0 0.7
BALB/cJ m 1.73 0.467   11 0.141 0.27 1.0, 2.0 1.01
C3H/HeJ m 1.67 0.516   6 0.211 0.31 1.0, 2.0 0.8
C57BL/6J m 1.33 0.516   6 0.211 0.387 1.0, 2.0 -0.38
DBA/2J m 1.27 0.467   11 0.141 0.367 1.0, 2.0 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1.0 0.1883 1.3793 0.6207
AKR/J m 1.6364 0.1391 1.9165 1.3562
BALB/cJ m 1.7273 0.1391 2.0074 1.4471
C3H/HeJ m 1.6667 0.1883 2.046 1.2874
C57BL/6J m 1.3333 0.1883 1.7126 0.954
DBA/2J m 1.2727 0.1391 1.5529 0.9926




  GWAS USING LINEAR MIXED MODELS