Project measure / variable:   Schalkwyk1   dur_immobil_TST1

ID, description, units MPD:34531   dur_immobil_TST1   TST duration of immobility, 5 min test   [s]  trial 1  
Data set, strains Schalkwyk1   inbred   8 strains     sex: m     age: 9-11wks
Procedure tail suspension test
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  STRAIN COMPARISON PLOT
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Schalkwyk1 - TST duration of immobility, 5 min test trial 1



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means139   s
Median of the strain means146   s
SD of the strain means± 30.8
Coefficient of variation (CV)0.221
Min–max range of strain means76.3   –   172   s
Mean sample size per strain10.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 66408.97 9486.9957 1.9645 0.0714
Residuals 74 357370.008 4829.3244


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 158.0 74.0   11 22.3 0.468 40.8, 242.0 0.62
A/J m 158.0 60.3   10 19.1 0.381 68.2, 240.0 0.62
BALB/cByJ m 162.0 55.2   10 17.5 0.341 65.2, 273.0 0.75
C3H/HeJ m 125.0 67.7   9 22.6 0.54 28.4, 227.0 -0.46
C57BL/6J m 172.0 70.2   10 22.2 0.409 52.6, 263.0 1.07
DBA/2J m 76.3 73.7   10 23.3 0.966 8.2, 262.0 -2.04
FVB/NJ m 133.0 82.2   11 24.8 0.62 21.6, 254.0 -0.2
SJL/J m 128.0 66.9   11 20.2 0.522 53.8, 266.0 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 158.2909 20.953 200.0407 116.5411
A/J m 158.28 21.9757 202.0676 114.4924
BALB/cByJ m 161.72 21.9757 205.5076 117.9324
C3H/HeJ m 125.4 23.1644 171.5562 79.2438
C57BL/6J m 171.82 21.9757 215.6076 128.0324
DBA/2J m 76.3 21.9757 120.0876 32.5124
FVB/NJ m 132.7273 20.953 174.4771 90.9774
SJL/J m 128.2909 20.953 170.0407 86.5411




  GWAS USING LINEAR MIXED MODELS