Project measure / variable:   Schalkwyk1   dur_center_OFT

ID, description, units MPD:34505   dur_center_OFT   duration in center, 5 min test   [s]  
Data set, strains Schalkwyk1   inbred   8 strains     sex: m     age: 9-11wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Schalkwyk1 - duration in center, 5 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means6.45   s
Median of the strain means5.57   s
SD of the strain means± 6.18
Coefficient of variation (CV)0.959
Min–max range of strain means0   –   18.0   s
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 2662.4505 380.3501 10.6225 < 0.0001
Residuals 78 2792.874 35.8061


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 7.45 7.33   11 2.21 0.984 0.16
A/J m 0.0 0.0   11 0.0 0.0 -1.04
BALB/cByJ m 0.851 1.22   11 0.367 1.43 -0.91
C3H/HeJ m 18.0 13.6   9 4.54 0.759 3.4, 45.2 1.87
C57BL/6J m 12.4 4.86   11 1.46 0.391 6.4, 21.4 0.96
DBA/2J m 4.98 5.02   11 1.51 1.01 -0.24
FVB/NJ m 6.15 2.67   11 0.806 0.434 2.59, 10.2 -0.05
SJL/J m 1.73 4.43   11 1.33 2.56 -0.76


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 7.4545 1.8042 11.0464 3.8627
A/J m 0.0 1.8042 3.5919 -3.5919
BALB/cByJ m 0.8509 1.8042 4.4428 -2.741
C3H/HeJ m 17.9556 1.9946 21.9265 13.9846
C57BL/6J m 12.4364 1.8042 16.0282 8.8445
DBA/2J m 4.9818 1.8042 8.5737 1.39
FVB/NJ m 6.1545 1.8042 9.7464 2.5627
SJL/J m 1.7309 1.8042 5.3228 -1.861




  GWAS USING LINEAR MIXED MODELS