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Project measure / variable:   Jax5   born_total

ID, description, units MPD:31407   born_total   total number of pups born per dam   [n]  
Data set, strains Jax5   inbred   35 strains     sex: f     age: 6-40wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Jax5 - total number of pups born per dam



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested35 strains
Mean of the strain means21.6   n
Median of the strain means21.4   n
SD of the strain means± 5.91
Coefficient of variation (CV)0.274
Min–max range of strain means11.2   –   35.7   n
Mean sample size per strain46.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 54989.8579 1617.3488 27.7622 < 0.0001
Residuals 1583 92221.07 58.2572


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J f 14.3 6.99   49 0.998 0.488 3.0, 29.0 -1.24
129S1/SvImJ f 24.0 8.86   47 1.29 0.369 4.0, 53.0 0.4
129X1/SvJ f 22.7 8.42   48 1.21 0.371 4.0, 55.0 0.18
A/J f 22.0 8.19   51 1.15 0.372 6.0, 40.0 0.07
AKR/J f 18.6 6.65   49 0.95 0.357 6.0, 33.0 -0.51
B6.129P2-Apoetm1Unc/J f 20.0 5.06   50 0.715 0.253 7.0, 31.0 -0.27
B6(Cg)-Tyrc-2J/J f 21.6 7.15   18 1.69 0.331 3.0, 32.0 0.0
BALB/cByJ f 17.9 7.62   43 1.16 0.426 3.0, 35.0 -0.63
BALB/cJ f 22.0 7.14   50 1.01 0.324 5.0, 36.0 0.07
C3HeB/FeJ f 35.1 10.4   34 1.78 0.295 10.0, 51.0 2.28
C3H/HeJ f 18.0 6.18   50 0.874 0.344 5.0, 31.0 -0.61
C3H/HeOuJ f 21.2 8.13   50 1.15 0.383 3.0, 37.0 -0.07
C57BL/10J f 19.2 7.63   50 1.08 0.397 6.0, 42.0 -0.41
C57BL/6J f 30.0 7.98   51 1.12 0.266 13.0, 49.0 1.42
C57BLKS/J f 14.3 7.31   45 1.09 0.51 3.0, 32.0 -1.24
C57L/J f 15.5 8.38   42 1.29 0.541 3.0, 29.0 -1.03
CAST/EiJ f 15.9 6.14   49 0.877 0.386 5.0, 28.0 -0.97
CBA/CaJ f 23.4 6.79   49 0.971 0.29 5.0, 40.0 0.3
CBA/J f 23.4 5.7   49 0.815 0.243 12.0, 37.0 0.3
DBA/1J f 21.4 5.33   50 0.754 0.249 12.0, 37.0 -0.04
DBA/1LacJ f 25.4 5.45   49 0.779 0.214 14.0, 39.0 0.64
DBA/2J f 25.8 6.29   49 0.898 0.243 10.0, 42.0 0.71
FVB/NJ f 35.7 8.87   50 1.26 0.249 15.0, 58.0 2.38
KK/HlJ f 17.2 9.03   25 1.81 0.524 2.0, 39.0 -0.75
LP/J f 14.9 6.37   50 0.901 0.428 2.0, 29.0 -1.14
MRL/MpJ f 18.9 6.2   50 0.877 0.328 6.0, 31.0 -0.46
NOD.CB17-Prkdcscid/J f 24.9 8.52   50 1.2 0.343 6.0, 43.0 0.56
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 24.7 9.16   22 1.95 0.371 7.0, 43.0 0.52
NOD/ShiLtJ f 29.2 9.08   50 1.28 0.311 12.0, 54.0 1.28
NZB/BlNJ f 11.2 5.74   50 0.811 0.513 1.0, 23.0 -1.76
NZW/LacJ f 18.8 6.68   50 0.945 0.355 4.0, 34.0 -0.48
PL/J f 20.5 10.1   49 1.44 0.491 3.0, 38.0 -0.19
SJL/J f 33.2 10.4   50 1.46 0.312 12.0, 54.0 1.96
SM/J f 13.3 6.53   50 0.923 0.49 3.0, 29.0 -1.41
SWR/J f 22.3 10.3   50 1.45 0.46 2.0, 41.0 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J f 14.3061 1.0904 16.4449 12.1674
129S1/SvImJ f 23.9787 1.1133 26.1625 21.795
129X1/SvJ f 22.7083 1.1017 24.8692 20.5474
A/J f 22.0392 1.0688 24.1356 19.9428
AKR/J f 18.6122 1.0904 20.751 16.4735
B6.129P2-Apoetm1Unc/J f 19.96 1.0794 22.0772 17.8428
B6(Cg)-Tyrc-2J/J f 21.6111 1.799 25.1398 18.0824
BALB/cByJ f 17.8837 1.164 20.1668 15.6006
BALB/cJ f 22.02 1.0794 24.1372 19.9028
C3HeB/FeJ f 35.0882 1.309 37.6558 32.5207
C3H/HeJ f 17.98 1.0794 20.0972 15.8628
C3H/HeOuJ f 21.2 1.0794 23.3172 19.0828
C57BL/10J f 19.22 1.0794 21.3372 17.1028
C57BL/6J f 30.0196 1.0688 32.116 27.9232
C57BLKS/J f 14.3333 1.1378 16.5651 12.1016
C57L/J f 15.5 1.1777 17.8101 13.1899
CAST/EiJ f 15.898 1.0904 18.0367 13.7592
CBA/CaJ f 23.4082 1.0904 25.5469 21.2694
CBA/J f 23.449 1.0904 25.5877 21.3102
DBA/1J f 21.4 1.0794 23.5172 19.2828
DBA/1LacJ f 25.4286 1.0904 27.5673 23.2898
DBA/2J f 25.8367 1.0904 27.9755 23.698
FVB/NJ f 35.68 1.0794 37.7972 33.5628
KK/HlJ f 17.24 1.5265 20.2342 14.2458
LP/J f 14.88 1.0794 16.9972 12.7628
MRL/MpJ f 18.9 1.0794 21.0172 16.7828
NOD.CB17-Prkdcscid/J f 24.86 1.0794 26.9772 22.7428
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 24.6591 1.6273 27.8509 21.4672
NOD/ShiLtJ f 29.22 1.0794 31.3372 27.1028
NZB/BlNJ f 11.18 1.0794 13.2972 9.0628
NZW/LacJ f 18.8 1.0794 20.9172 16.6828
PL/J f 20.4694 1.0904 22.6081 18.3307
SJL/J f 33.16 1.0794 35.2772 31.0428
SM/J f 13.32 1.0794 15.4372 11.2028
SWR/J f 22.3 1.0794 24.4172 20.1828




  GWAS USING LINEAR MIXED MODELS