Project measure / variable:   Moy1   EntSTR1_nov

ID, description, units MPD:30123   EntSTR1_nov   number of entries into chamber with stranger1 (former novel mouse), 10 min test   [n]  
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
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  STRAIN COMPARISON PLOT
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Moy1 - number of entries into chamber with stranger1 (former novel mouse), 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means10.3   n
Median of the strain means9.71   n
SD of the strain means± 5.25
Coefficient of variation (CV)0.512
Min–max range of strain means1.30   –   18.9   n
Mean sample size per strain22.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 9022.4597 563.9037 28.6761 < 0.0001
Residuals 371 7295.561 19.6646


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 4.8 3.47   20 0.777 0.724 -1.04
A/J m 1.3 1.13   20 0.252 0.868 -1.71
AKR/J m 13.3 3.23   40 0.511 0.242 5.0, 20.0 0.58
BALB/cByJ m 7.0 8.11   20 1.81 1.16 -0.62
BTBR T+ Itpr3tf/J m 5.54 4.15   24 0.847 0.749 -0.9
C3H/HeJ m 5.42 1.77   19 0.407 0.327 3.0, 10.0 -0.92
C57BL/6J m 12.7 3.47   40 0.549 0.273 5.0, 19.0 0.46
C57L/J m 16.9 4.43   19 1.02 0.262 8.0, 28.0 1.26
C58/J m 18.9 7.22   20 1.61 0.381 1.0, 36.0 1.64
DBA/2J m 9.71 4.66   38 0.755 0.479 3.0, 18.0 -0.11
FVB/NJ m 16.9 4.28   17 1.04 0.254 10.0, 25.0 1.26
NOD/ShiLtJ m 17.6 4.92   20 1.1 0.28 8.0, 25.0 1.4
NZB/BlNJ m 6.05 3.5   20 0.783 0.579 -0.8
PERA/EiJ m 10.4 4.62   10 1.46 0.445 5.0, 17.0 0.03
PL/J m 13.1 2.72   20 0.609 0.209 7.0, 20.0 0.54
SJL/J m 8.09 6.39   22 1.36 0.79 -0.41
SWR/J m 6.79 2.76   19 0.633 0.407 3.0, 13.0 -0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 4.8 0.9916 6.7498 2.8502
A/J m 1.3 0.9916 3.2498 0.0
AKR/J m 13.325 0.7012 14.7037 11.9463
BALB/cByJ m 7.0 0.9916 8.9498 5.0502
BTBR T+ Itpr3tf/J m 5.5417 0.9052 7.3216 3.7617
C3H/HeJ m 5.4211 1.0173 7.4215 3.4206
C57BL/6J m 12.7 0.7012 14.0787 11.3213
C57L/J m 16.8947 1.0173 18.8952 14.8943
C58/J m 18.95 0.9916 20.8998 17.0002
DBA/2J m 9.7105 0.7194 11.1251 8.296
FVB/NJ m 16.8824 1.0755 18.9972 14.7675
NOD/ShiLtJ m 17.6 0.9916 19.5498 15.6502
NZB/BlNJ m 6.05 0.9916 7.9998 4.1002
PERA/EiJ m 10.4 1.4023 13.1575 7.6425
PL/J m 13.05 0.9916 14.9998 11.1002
SJL/J m 8.0909 0.9454 9.95 6.2318
SWR/J m 6.7895 1.0173 8.7899 4.789




  GWAS USING LINEAR MIXED MODELS