ID, description, units |
MPD:30006
methactivity2_OFT change in activity after methamphetamine and habituation, day3-day2
[cm]
methamphetamine study |
Data set, strains | Palmer2 B6.A consomic w/par 21 strains sex: both age: 7-16wks |
Procedure | open field test |
Ontology mappings |
|
Measure Summary | Female | Male | |
Number of strains tested | 21 strains | 21 strains | |
Mean of the strain means | |||
Median of the strain means | 12029 cm | 12998 cm | |
SD of the strain means | ± 4230 | ± 3786 | |
Coefficient of variation (CV) | 0.348 | 0.306 | |
Min–max range of strain means | |||
Mean sample size per strain | 10.4 mice | 11.8 mice |
Factor | DF | Sum of squares | Mean sum of squares | F value | p value (Pr>F) |
sex | 1 | 36764652.755 | 36764652.755 | 1.2861 |
|
strain | 20 | 6670645706.727 | 333532285.3364 | 11.6676 |
|
sex:strain | 20 | 833834083.9719 | 41691704.1986 | 1.4585 |
|
Residuals | 497 | 14207287549.1361 | 28586091.6482 |
|
Strain | Sex | Mean | SD | N mice | SEM | CV | Min, Max | Z score |
---|---|---|---|---|---|---|---|---|
A/J | f | 1426.0 | 2146.0 | 9 | 715.0 | 1.5 |
|
-2.54 |
A/J | m | 3204.0 | 3772.0 | 10 | 1193.0 | 1.18 |
|
-2.42 |
B6.A-Chr1 | f | 16078.0 | 10144.0 | 4 | 5072.0 | 0.631 |
|
0.93 |
B6.A-Chr1 | m | 7426.0 | 3366.0 | 6 | 1374.0 | 0.453 |
|
-1.3 |
B6.A-Chr10 | f | 18340.0 | 7532.0 | 13 | 2089.0 | 0.411 |
|
1.46 |
B6.A-Chr10 | m | 18237.0 | 2271.0 | 16 | 568.0 | 0.125 |
|
1.55 |
B6.A-Chr11 | f | 8312.0 | 4279.0 | 14 | 1144.0 | 0.515 |
|
-0.91 |
B6.A-Chr11 | m | 7862.0 | 3818.0 | 23 | 796.0 | 0.486 |
|
-1.19 |
B6.A-Chr12 | f | 19297.0 | 4339.0 | 15 | 1120.0 | 0.225 |
|
1.69 |
B6.A-Chr12 | m | 16303.0 | 4787.0 | 34 | 821.0 | 0.294 |
|
1.04 |
B6.A-Chr14 | f | 12610.0 | 6228.0 | 9 | 2076.0 | 0.494 |
|
0.11 |
B6.A-Chr14 | m | 12135.0 | 5257.0 | 5 | 2351.0 | 0.433 |
|
-0.06 |
B6.A-Chr15 | f | 14621.0 | 6366.0 | 10 | 2013.0 | 0.435 |
|
0.58 |
B6.A-Chr15 | m | 16002.0 | 3876.0 | 13 | 1075.0 | 0.242 |
|
0.96 |
B6.A-Chr16 | f | 7727.0 | 4364.0 | 13 | 1210.0 | 0.565 |
|
-1.05 |
B6.A-Chr16 | m | 9001.0 | 4629.0 | 9 | 1543.0 | 0.514 |
|
-0.89 |
B6.A-Chr17 | f | 13208.0 | 4466.0 | 3 | 2578.0 | 0.338 |
|
0.25 |
B6.A-Chr17 | m | 17859.0 | 3811.0 | 9 | 1270.0 | 0.213 |
|
1.45 |
B6.A-Chr18 | f | 11630.0 | 2147.0 | 5 | 960.0 | 0.185 |
|
-0.13 |
B6.A-Chr18 | m | 14577.0 | 4757.0 | 9 | 1586.0 | 0.326 |
|
0.58 |
B6.A-Chr19 | f | 11144.0 | 7280.0 | 10 | 2302.0 | 0.653 |
|
-0.24 |
B6.A-Chr19 | m | 15817.0 | 3737.0 | 10 | 1182.0 | 0.236 |
|
0.91 |
B6.A-Chr2 | f | 11440.0 | 4067.0 | 10 | 1286.0 | 0.355 |
|
-0.17 |
B6.A-Chr2 | m | 13300.0 | 5109.0 | 10 | 1615.0 | 0.384 |
|
0.25 |
B6.A-Chr3 | f | 17573.0 | 6246.0 | 8 | 2208.0 | 0.355 |
|
1.28 |
B6.A-Chr3 | m | 15374.0 | 7747.0 | 14 | 2071.0 | 0.504 |
|
0.8 |
B6.A-Chr4 | f | 9243.0 | 4094.0 | 10 | 1294.0 | 0.443 |
|
-0.69 |
B6.A-Chr4 | m | 11588.0 | 4369.0 | 9 | 1456.0 | 0.377 |
|
-0.2 |
B6.A-Chr5 | f | 14341.0 | 5334.0 | 14 | 1425.0 | 0.372 |
|
0.52 |
B6.A-Chr5 | m | 9400.0 | 5847.0 | 10 | 1849.0 | 0.622 |
|
-0.78 |
B6.A-Chr6 | f | 12029.0 | 6800.0 | 10 | 2150.0 | 0.565 |
|
-0.03 |
B6.A-Chr6 | m | 11046.0 | 5119.0 | 9 | 1706.0 | 0.463 |
|
-0.35 |
B6.A-Chr7 | f | 11172.0 | 5005.0 | 10 | 1583.0 | 0.448 |
|
-0.23 |
B6.A-Chr7 | m | 10845.0 | 4259.0 | 11 | 1284.0 | 0.393 |
|
-0.4 |
B6.A-Chr8 | f | 5794.0 | 3858.0 | 12 | 1114.0 | 0.666 |
|
-1.51 |
B6.A-Chr8 | m | 9399.0 | 6572.0 | 8 | 2324.0 | 0.699 |
|
-0.78 |
B6.A-Chr9 | f | 15006.0 | 6810.0 | 10 | 2154.0 | 0.454 |
|
0.67 |
B6.A-Chr9 | m | 12998.0 | 3509.0 | 9 | 1170.0 | 0.27 |
|
0.17 |
B6.A-ChrX | f | 11121.0 | 5498.0 | 12 | 1587.0 | 0.494 |
|
-0.25 |
B6.A-ChrX | m | 14252.0 | 6598.0 | 6 | 2694.0 | 0.463 |
|
0.5 |
C57BL/6J | f | 13286.0 | 6972.0 | 55 | 940.0 | 0.525 |
|
0.27 |
C57BL/6J | m | 13004.0 | 5204.0 | 53 | 715.0 | 0.4 |
|
0.17 |
Strain | Sex | Mean | SEM | UpperCL | LowerCL |
---|---|---|---|---|---|
A/J | f | 1426.4444 | 1782.1988 | 4928.017 | 0.0 |
A/J | m | 3204.4 | 1690.7422 | 6526.2834 | 0.0 |
B6.A-Chr1 | f | 16078.5 | 2673.2981 | 21330.8588 | 10826.1412 |
B6.A-Chr1 | m | 7426.1667 | 2182.7388 | 11714.6997 | 3137.6337 |
B6.A-Chr10 | f | 18339.6154 | 1482.879 | 21253.0998 | 15426.1309 |
B6.A-Chr10 | m | 18237.1875 | 1336.6491 | 20863.3669 | 15611.0081 |
B6.A-Chr11 | f | 8311.8571 | 1428.938 | 11119.361 | 5504.3533 |
B6.A-Chr11 | m | 7862.4348 | 1114.8424 | 10052.8198 | 5672.0497 |
B6.A-Chr12 | f | 19296.8 | 1380.4852 | 22009.1064 | 16584.4936 |
B6.A-Chr12 | m | 16303.0 | 916.9337 | 18104.5442 | 14501.4558 |
B6.A-Chr14 | f | 12610.4444 | 1782.1988 | 16112.017 | 9108.8719 |
B6.A-Chr14 | m | 12134.6 | 2391.0705 | 16832.4525 | 7436.7475 |
B6.A-Chr15 | f | 14621.1 | 1690.7422 | 17942.9834 | 11299.2166 |
B6.A-Chr15 | m | 16002.3077 | 1482.879 | 18915.7922 | 13088.8232 |
B6.A-Chr16 | f | 7726.9231 | 1482.879 | 10640.4075 | 4813.4386 |
B6.A-Chr16 | m | 9001.2222 | 1782.1988 | 12502.7948 | 5499.6497 |
B6.A-Chr17 | f | 13208.0 | 3086.8588 | 19272.9015 | 7143.0985 |
B6.A-Chr17 | m | 17858.6667 | 1782.1988 | 21360.2392 | 14357.0941 |
B6.A-Chr18 | f | 11629.8 | 2391.0705 | 16327.6525 | 6931.9475 |
B6.A-Chr18 | m | 14576.7778 | 1782.1988 | 18078.3503 | 11075.2052 |
B6.A-Chr19 | f | 11143.9 | 1690.7422 | 14465.7834 | 7822.0166 |
B6.A-Chr19 | m | 15816.7 | 1690.7422 | 19138.5834 | 12494.8166 |
B6.A-Chr2 | f | 11440.4 | 1690.7422 | 14762.2834 | 8118.5166 |
B6.A-Chr2 | m | 13299.5 | 1690.7422 | 16621.3834 | 9977.6166 |
B6.A-Chr3 | f | 17573.125 | 1890.3072 | 21287.1035 | 13859.1465 |
B6.A-Chr3 | m | 15373.8571 | 1428.938 | 18181.361 | 12566.3533 |
B6.A-Chr4 | f | 9242.6 | 1690.7422 | 12564.4834 | 5920.7166 |
B6.A-Chr4 | m | 11588.4444 | 1782.1988 | 15090.017 | 8086.8719 |
B6.A-Chr5 | f | 14341.4286 | 1428.938 | 17148.9324 | 11533.9247 |
B6.A-Chr5 | m | 9400.0 | 1690.7422 | 12721.8834 | 6078.1166 |
B6.A-Chr6 | f | 12028.6 | 1690.7422 | 15350.4834 | 8706.7166 |
B6.A-Chr6 | m | 11046.3333 | 1782.1988 | 14547.9059 | 7544.7608 |
B6.A-Chr7 | f | 11172.1 | 1690.7422 | 14493.9834 | 7850.2166 |
B6.A-Chr7 | m | 10845.0909 | 1612.0594 | 14012.3824 | 7677.7994 |
B6.A-Chr8 | f | 5793.5 | 1543.4294 | 8825.9508 | 2761.0492 |
B6.A-Chr8 | m | 9398.875 | 1890.3072 | 13112.8535 | 5684.8965 |
B6.A-Chr9 | f | 15005.9 | 1690.7422 | 18327.7834 | 11684.0166 |
B6.A-Chr9 | m | 12998.1111 | 1782.1988 | 16499.6836 | 9496.5386 |
B6.A-ChrX | f | 11121.4167 | 1543.4294 | 14153.8674 | 8088.9659 |
B6.A-ChrX | m | 14251.5 | 2182.7388 | 18540.033 | 9962.967 |
C57BL/6J | f | 13286.0364 | 720.9349 | 14702.4922 | 11869.5805 |
C57BL/6J | m | 13003.7925 | 734.4115 | 14446.7264 | 11560.8585 |
Strain | Sex | Mean | SEM | UpperCL | LowerCL |
---|---|---|---|---|---|
A/J | both | 2315.4222 | 1228.2957 | 4728.7145 | 0.0 |
B6.A-Chr1 | both | 11752.3333 | 1725.6065 | 15142.7164 | 8361.9503 |
B6.A-Chr10 | both | 18288.4014 | 998.1935 | 20249.6007 | 16327.2022 |
B6.A-Chr11 | both | 8087.146 | 906.1922 | 9867.5858 | 6306.7061 |
B6.A-Chr12 | both | 17799.9 | 828.6294 | 19427.9485 | 16171.8515 |
B6.A-Chr14 | both | 12372.5222 | 1491.0945 | 15302.148 | 9442.8965 |
B6.A-Chr15 | both | 15311.7038 | 1124.4487 | 17520.9628 | 13102.4449 |
B6.A-Chr16 | both | 8364.0726 | 1159.2198 | 10641.6482 | 6086.4971 |
B6.A-Chr17 | both | 15533.3333 | 1782.1988 | 19034.9059 | 12031.7608 |
B6.A-Chr18 | both | 13103.2889 | 1491.0945 | 16032.9147 | 10173.6631 |
B6.A-Chr19 | both | 13480.3 | 1195.5353 | 15829.2263 | 11131.3737 |
B6.A-Chr2 | both | 12369.95 | 1195.5353 | 14718.8763 | 10021.0237 |
B6.A-Chr3 | both | 16473.4911 | 1184.8128 | 18801.3503 | 14145.6318 |
B6.A-Chr4 | both | 10415.5222 | 1228.2957 | 12828.8145 | 8002.2299 |
B6.A-Chr5 | both | 11870.7143 | 1106.8506 | 14045.3974 | 9696.0311 |
B6.A-Chr6 | both | 11537.4667 | 1228.2957 | 13950.759 | 9124.1743 |
B6.A-Chr7 | both | 11008.5955 | 1168.048 | 13303.5162 | 8713.6747 |
B6.A-Chr8 | both | 7596.1875 | 1220.1881 | 9993.5503 | 5198.8247 |
B6.A-Chr9 | both | 14002.0056 | 1228.2957 | 16415.2979 | 11588.7132 |
B6.A-ChrX | both | 12686.4583 | 1336.6491 | 15312.6377 | 10060.2789 |
C57BL/6J | both | 13144.9144 | 514.5647 | 14155.9047 | 12133.9241 |