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Project measure / variable:   Svenson4   total_area

ID, description, units MPD:27409   total_area   total body area without head   [cm2]  
Data set, strains Svenson4   B6.PWD consomic w/par   28 strains     sex: both     age: 16wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Svenson4 - total body area without head



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means20.5   cm2 23.6   cm2
Median of the strain means20.4   cm2 23.9   cm2
SD of the strain means± 1.64 ± 1.67
Coefficient of variation (CV)0.0802 0.0706
Min–max range of strain means15.7   –   24.9   cm2 17.4   –   25.6   cm2
Mean sample size per strain9.9   mice 9.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1288.92 1288.92 645.0002 < 0.0001
strain 27 2006.0954 74.2998 37.1811 < 0.0001
sex:strain 27 159.084 5.892 2.9485 < 0.0001
Residuals 498 995.1657 1.9983


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 20.3 1.02   8 0.362 0.0504 19.4, 22.0 -0.11
B6.PWD-Chr1 m 24.6 0.423   8 0.15 0.0172 24.1, 25.3 0.6
B6.PWD-Chr10.1 f 24.9 3.58   12 1.03 0.144 19.4, 30.0 2.69
B6.PWD-Chr10.1 m 24.6 1.36   10 0.43 0.0554 22.3, 26.9 0.6
B6.PWD-Chr10.2 f 20.5 1.02   14 0.273 0.05 18.9, 22.1 0.01
B6.PWD-Chr10.2 m 24.2 1.5   13 0.416 0.0619 21.7, 26.2 0.36
B6.PWD-Chr10.3 f 19.0 0.982   9 0.327 0.0518 17.4, 20.9 -0.9
B6.PWD-Chr10.3 m 22.3 0.843   8 0.298 0.0378 21.4, 23.7 -0.78
B6.PWD-Chr11.1 f 20.2 1.09   9 0.362 0.0537 18.5, 21.8 -0.17
B6.PWD-Chr11.1 m 22.1 1.71   8 0.604 0.0775 20.2, 25.3 -0.9
B6.PWD-Chr11.2 f 20.8 0.648   11 0.195 0.0311 20.0, 21.8 0.2
B6.PWD-Chr11.2 m 24.0 1.05   12 0.303 0.0438 22.5, 25.6 0.24
B6.PWD-Chr11.3 f 20.9 1.24   11 0.374 0.0591 19.3, 23.7 0.26
B6.PWD-Chr11.3 m 24.5 1.32   8 0.468 0.0539 21.9, 25.9 0.54
B6.PWD-Chr12 f 20.8 1.17   8 0.412 0.056 18.7, 22.1 0.2
B6.PWD-Chr12 m 23.9 0.626   8 0.221 0.0262 22.7, 24.5 0.18
B6.PWD-Chr13 f 21.6 2.28   8 0.807 0.106 19.0, 24.4 0.68
B6.PWD-Chr13 m 24.3 0.925   8 0.327 0.0381 22.6, 25.8 0.42
B6.PWD-Chr14 f 19.1 1.06   8 0.375 0.0554 17.6, 20.6 -0.84
B6.PWD-Chr14 m 22.6 1.22   8 0.432 0.0542 21.0, 24.2 -0.6
B6.PWD-Chr15 f 19.9 0.611   8 0.216 0.0306 18.6, 20.8 -0.35
B6.PWD-Chr15 m 23.3 0.908   8 0.321 0.039 22.1, 24.7 -0.18
B6.PWD-Chr16 f 21.2 1.8   8 0.637 0.0851 18.5, 23.3 0.44
B6.PWD-Chr16 m 23.5 1.62   8 0.573 0.0689 21.0, 25.9 -0.06
B6.PWD-Chr17 f 20.4 1.3   9 0.432 0.0636 18.7, 22.2 -0.05
B6.PWD-Chr17 m 24.2 1.81   10 0.572 0.0748 22.2, 27.1 0.36
B6.PWD-Chr18 f 22.4 0.914   9 0.305 0.0408 20.9, 23.8 1.17
B6.PWD-Chr18 m 25.4 1.46   9 0.488 0.0575 24.1, 28.8 1.08
B6.PWD-Chr19 f 20.3 1.34   8 0.475 0.0663 18.9, 22.9 -0.11
B6.PWD-Chr19 m 22.9 1.15   8 0.406 0.0501 21.2, 24.9 -0.42
B6.PWD-Chr2 f 19.2 1.9   9 0.632 0.0985 17.3, 23.9 -0.78
B6.PWD-Chr2 m 22.6 1.07   10 0.337 0.0472 20.9, 24.4 -0.6
B6.PWD-Chr3 f 18.4 0.791   8 0.28 0.043 17.1, 19.9 -1.27
B6.PWD-Chr3 m 20.9 0.877   8 0.31 0.042 19.2, 22.3 -1.62
B6.PWD-Chr5 f 21.3 0.809   10 0.256 0.038 20.4, 22.6 0.5
B6.PWD-Chr5 m 25.4 1.67   14 0.446 0.0655 21.2, 27.5 1.08
B6.PWD-Chr6 f 19.7 1.35   10 0.427 0.0687 17.4, 21.8 -0.47
B6.PWD-Chr6 m 23.5 1.64   8 0.581 0.07 21.2, 25.3 -0.06
B6.PWD-Chr8 f 22.5 1.4   4 0.702 0.0624 20.9, 24.0 1.23
B6.PWD-Chr8 m 25.3 1.83   5 0.819 0.0723 23.4, 28.0 1.02
B6.PWD-Chr9 f 19.6 1.03   8 0.364 0.0527 17.5, 20.6 -0.54
B6.PWD-Chr9 m 23.1 1.34   8 0.472 0.0579 21.1, 25.1 -0.3
B6.PWD-ChrX.1 f 21.4 0.64   8 0.226 0.0299 20.6, 22.4 0.56
B6.PWD-ChrX.1 m 24.9 0.893   8 0.316 0.0359 23.3, 26.2 0.78
B6.PWD-ChrX.2 f 22.5 1.36   13 0.376 0.0604 19.7, 25.2 1.23
B6.PWD-ChrX.2 m 24.3 2.34   9 0.78 0.0963 21.1, 27.9 0.42
B6.PWD-ChrX.3 f 21.0 1.4   17 0.341 0.0668 18.8, 23.3 0.32
B6.PWD-ChrX.3 m 25.6 1.17   8 0.412 0.0455 23.8, 26.9 1.2
B6.PWD-ChrY f 21.0 1.37   8 0.484 0.0651 19.1, 23.2 0.32
B6.PWD-ChrY m 25.1 1.03   8 0.363 0.0409 23.5, 26.2 0.9
B6.PWD-mt f 19.6 1.54   8 0.543 0.0784 17.1, 22.1 -0.54
B6.PWD-mt m 23.1 1.72   8 0.609 0.0744 21.4, 25.8 -0.3
C57BL/6J f 19.2 1.82   19 0.416 0.0945 15.8, 21.9 -0.78
C57BL/6J m 23.3 1.57   19 0.359 0.0671 21.2, 28.0 -0.18
PWD/PhJ f 15.7 0.912   23 0.19 0.058 14.2, 18.0 -2.91
PWD/PhJ m 17.4 1.2   22 0.257 0.0692 14.6, 19.4 -3.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 20.3412 0.4998 21.3232 19.3593
B6.PWD-Chr1 m 24.6462 0.4998 25.6282 23.6643
B6.PWD-Chr10.1 f 24.92 0.4081 25.7218 24.1182
B6.PWD-Chr10.1 m 24.551 0.447 25.4293 23.6727
B6.PWD-Chr10.2 f 20.4671 0.3778 21.2094 19.7249
B6.PWD-Chr10.2 m 24.2454 0.3921 25.0157 23.4751
B6.PWD-Chr10.3 f 18.9756 0.4712 19.9014 18.0498
B6.PWD-Chr10.3 m 22.32 0.4998 23.302 21.338
B6.PWD-Chr11.1 f 20.2156 0.4712 21.1414 19.2898
B6.PWD-Chr11.1 m 22.055 0.4998 23.037 21.073
B6.PWD-Chr11.2 f 20.8109 0.4262 21.6483 19.9735
B6.PWD-Chr11.2 m 23.9867 0.4081 24.7884 23.1849
B6.PWD-Chr11.3 f 20.9491 0.4262 21.7865 20.1117
B6.PWD-Chr11.3 m 24.5225 0.4998 25.5045 23.5405
B6.PWD-Chr12 f 20.815 0.4998 21.797 19.833
B6.PWD-Chr12 m 23.9038 0.4998 24.8857 22.9218
B6.PWD-Chr13 f 21.5862 0.4998 22.5682 20.6043
B6.PWD-Chr13 m 24.3 0.4998 25.282 23.318
B6.PWD-Chr14 f 19.1462 0.4998 20.1282 18.1643
B6.PWD-Chr14 m 22.565 0.4998 23.547 21.583
B6.PWD-Chr15 f 19.9438 0.4998 20.9257 18.9618
B6.PWD-Chr15 m 23.275 0.4998 24.257 22.293
B6.PWD-Chr16 f 21.1575 0.4998 22.1395 20.1755
B6.PWD-Chr16 m 23.505 0.4998 24.487 22.523
B6.PWD-Chr17 f 20.3767 0.4712 21.3025 19.4509
B6.PWD-Chr17 m 24.169 0.447 25.0473 23.2907
B6.PWD-Chr18 f 22.4311 0.4712 23.3569 21.5053
B6.PWD-Chr18 m 25.4433 0.4712 26.3691 24.5175
B6.PWD-Chr19 f 20.2625 0.4998 21.2445 19.2805
B6.PWD-Chr19 m 22.9262 0.4998 23.9082 21.9443
B6.PWD-Chr2 f 19.2411 0.4712 20.1669 18.3153
B6.PWD-Chr2 m 22.586 0.447 23.4643 21.7077
B6.PWD-Chr3 f 18.3937 0.4998 19.3757 17.4118
B6.PWD-Chr3 m 20.8788 0.4998 21.8607 19.8968
B6.PWD-Chr5 f 21.299 0.447 22.1773 20.4207
B6.PWD-Chr5 m 25.4493 0.3778 26.1916 24.707
B6.PWD-Chr6 f 19.67 0.447 20.5483 18.7917
B6.PWD-Chr6 m 23.4625 0.4998 24.4445 22.4805
B6.PWD-Chr8 f 22.4775 0.7068 23.8662 21.0888
B6.PWD-Chr8 m 25.324 0.6322 26.5661 24.0819
B6.PWD-Chr9 f 19.55 0.4998 20.532 18.568
B6.PWD-Chr9 m 23.0787 0.4998 24.0607 22.0968
B6.PWD-ChrX.1 f 21.3562 0.4998 22.3382 20.3743
B6.PWD-ChrX.1 m 24.8625 0.4998 25.8445 23.8805
B6.PWD-ChrX.2 f 22.4646 0.3921 23.2349 21.6943
B6.PWD-ChrX.2 m 24.2822 0.4712 25.208 23.3564
B6.PWD-ChrX.3 f 21.04 0.3429 21.7136 20.3664
B6.PWD-ChrX.3 m 25.6063 0.4998 26.5882 24.6243
B6.PWD-ChrY f 21.0325 0.4998 22.0145 20.0505
B6.PWD-ChrY m 25.1275 0.4998 26.1095 24.1455
B6.PWD-mt f 19.5762 0.4998 20.5582 18.5943
B6.PWD-mt m 23.14 0.4998 24.122 22.158
C57BL/6J f 19.2068 0.3243 19.844 18.5697
C57BL/6J m 23.3279 0.3243 23.9651 22.6907
PWD/PhJ f 15.7317 0.2948 16.3109 15.1526
PWD/PhJ m 17.4055 0.3014 17.9976 16.8133


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 22.4937 0.3534 23.1881 21.7994
B6.PWD-Chr10.1 both 24.7355 0.3026 25.3301 24.1409
B6.PWD-Chr10.2 both 22.3563 0.2722 22.8911 21.8214
B6.PWD-Chr10.3 both 20.6478 0.3434 21.3226 19.973
B6.PWD-Chr11.1 both 21.1353 0.3434 21.8101 20.4605
B6.PWD-Chr11.2 both 22.3988 0.295 22.9785 21.8191
B6.PWD-Chr11.3 both 22.7358 0.3284 23.3811 22.0905
B6.PWD-Chr12 both 22.3594 0.3534 23.0537 21.665
B6.PWD-Chr13 both 22.9431 0.3534 23.6375 22.2488
B6.PWD-Chr14 both 20.8556 0.3534 21.55 20.1613
B6.PWD-Chr15 both 21.6094 0.3534 22.3037 20.915
B6.PWD-Chr16 both 22.3313 0.3534 23.0256 21.6369
B6.PWD-Chr17 both 22.2728 0.3248 22.9109 21.6348
B6.PWD-Chr18 both 23.9372 0.3332 24.5919 23.2826
B6.PWD-Chr19 both 21.5944 0.3534 22.2887 20.9
B6.PWD-Chr2 both 20.9136 0.3248 21.5516 20.2755
B6.PWD-Chr3 both 19.6362 0.3534 20.3306 18.9419
B6.PWD-Chr5 both 23.3741 0.2926 23.9491 22.7992
B6.PWD-Chr6 both 21.5662 0.3353 22.225 20.9075
B6.PWD-Chr8 both 23.9008 0.4741 24.8323 22.9692
B6.PWD-Chr9 both 21.3144 0.3534 22.0087 20.62
B6.PWD-ChrX.1 both 23.1094 0.3534 23.8037 22.415
B6.PWD-ChrX.2 both 23.3734 0.3065 23.9756 22.7712
B6.PWD-ChrX.3 both 23.3231 0.303 23.9185 22.7277
B6.PWD-ChrY both 23.08 0.3534 23.7743 22.3857
B6.PWD-mt both 21.3581 0.3534 22.0525 20.6638
C57BL/6J both 21.2674 0.2293 21.7179 20.8168
PWD/PhJ both 16.5686 0.2108 16.9827 16.1545




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA