Project measure / variable:   Svenson3   TG

ID, description, units MPD:27364   TG   triglycerides (plasma TG, 4h fast)   [mg/dL]  
Data set, strains Svenson3   B6.PWD consomic w/par   28 strains     sex: both     age: 8wks
Procedure lipid profile
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  STRAIN COMPARISON PLOT
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Svenson3 - triglycerides (plasma TG, 4h fast)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means91.7   mg/dL 105   mg/dL
Median of the strain means93.5   mg/dL 102   mg/dL
SD of the strain means± 16.2 ± 19.7
Coefficient of variation (CV)0.177 0.188
Min–max range of strain means64.5   –   139   mg/dL 65.6   –   138   mg/dL
Mean sample size per strain7.8   mice 8.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17167.7419 17167.7419 46.6034 < 0.0001
strain 27 104810.7509 3881.8797 10.5377 < 0.0001
sex:strain 27 30578.2587 1132.5281 3.0744 < 0.0001
Residuals 392 144404.6681 368.3793


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 70.2 12.2   8 4.32 0.174 47.0, 84.0 -1.33
B6.PWD-Chr1 m 97.0 10.4   10 3.3 0.108 84.0, 117.0 -0.39
B6.PWD-Chr10.1 f 105.0 22.2   12 6.39 0.211 68.0, 152.0 0.82
B6.PWD-Chr10.1 m 89.7 28.8   10 9.1 0.321 47.0, 133.0 -0.76
B6.PWD-Chr10.2 f 86.0 35.0   7 13.2 0.407 42.0, 135.0 -0.35
B6.PWD-Chr10.2 m 90.3 20.5   3 11.9 0.227 73.0, 113.0 -0.73
B6.PWD-Chr10.3 f 97.9 21.2   8 7.49 0.216 65.0, 140.0 0.38
B6.PWD-Chr10.3 m 132.0 19.4   8 6.85 0.147 106.0, 168.0 1.39
B6.PWD-Chr11.1 f 93.0 5.29   3 3.06 0.0569 87.0, 97.0 0.08
B6.PWD-Chr11.1 m 90.0 13.0   3 7.51 0.144 77.0, 103.0 -0.75
B6.PWD-Chr11.2 f 115.0 27.1   10 8.57 0.235 78.0, 162.0 1.44
B6.PWD-Chr11.2 m 120.0 17.4   10 5.51 0.145 99.0, 152.0 0.78
B6.PWD-Chr11.3 f 98.4 20.7   8 7.32 0.21 70.0, 128.0 0.41
B6.PWD-Chr11.3 m 137.0 14.1   8 4.98 0.103 122.0, 153.0 1.64
B6.PWD-Chr12 f 116.0 16.1   9 5.35 0.138 89.0, 141.0 1.5
B6.PWD-Chr12 m 107.0 19.8   10 6.25 0.185 81.0, 136.0 0.12
B6.PWD-Chr13 f 93.9 26.5   8 9.36 0.282 62.0, 151.0 0.13
B6.PWD-Chr13 m 120.0 25.5   8 9.03 0.213 84.0, 143.0 0.78
B6.PWD-Chr14 f 98.1 12.2   10 3.87 0.125 81.0, 125.0 0.39
B6.PWD-Chr14 m 124.0 19.4   10 6.13 0.156 95.0, 153.0 0.98
B6.PWD-Chr15 f 88.2 11.9   8 4.2 0.135 74.0, 110.0 -0.22
B6.PWD-Chr15 m 95.9 17.1   8 6.06 0.179 65.0, 121.0 -0.45
B6.PWD-Chr16 f 74.8 16.8   8 5.93 0.224 51.0, 107.0 -1.04
B6.PWD-Chr16 m 93.9 16.8   8 5.95 0.179 69.0, 115.0 -0.55
B6.PWD-Chr17 f 88.6 9.38   7 3.54 0.106 74.0, 102.0 -0.19
B6.PWD-Chr17 m 102.0 25.7   8 9.09 0.252 69.0, 146.0 -0.14
B6.PWD-Chr18 f 69.4 15.7   5 7.03 0.227 50.0, 91.0 -1.38
B6.PWD-Chr18 m 110.0 20.2   9 6.73 0.184 68.0, 134.0 0.27
B6.PWD-Chr19 f 95.8 23.8   8 8.43 0.249 67.0, 129.0 0.25
B6.PWD-Chr19 m 114.0 21.5   8 7.62 0.189 81.0, 136.0 0.47
B6.PWD-Chr2 f 79.3 23.6   7 8.94 0.298 48.0, 115.0 -0.77
B6.PWD-Chr2 m 103.0 27.7   10 8.77 0.27 59.0, 157.0 -0.09
B6.PWD-Chr3 f 71.8 9.81   8 3.47 0.137 56.0, 91.0 -1.23
B6.PWD-Chr3 m 83.7 9.71   9 3.24 0.116 67.0, 103.0 -1.07
B6.PWD-Chr5 f 97.1 18.8   9 6.26 0.193 68.0, 123.0 0.33
B6.PWD-Chr5 m 137.0 21.4   11 6.45 0.157 100.0, 161.0 1.64
B6.PWD-Chr6 f 80.3 14.2   9 4.75 0.177 53.0, 103.0 -0.7
B6.PWD-Chr6 m 85.6 19.0   8 6.72 0.222 65.0, 115.0 -0.97
B6.PWD-Chr8 f 139.0 39.5   3 22.8 0.284 99.0, 178.0 2.92
B6.PWD-Chr8 m 132.0 6.07   5 2.71 0.0458 123.0, 140.0 1.39
B6.PWD-Chr9 f 94.1 17.9   9 5.96 0.19 70.0, 117.0 0.15
B6.PWD-Chr9 m 112.0 19.3   8 6.82 0.173 93.0, 148.0 0.37
B6.PWD-ChrX.1 f 99.2 14.4   8 5.07 0.145 71.0, 118.0 0.46
B6.PWD-ChrX.1 m 87.2 7.63   8 2.7 0.0874 76.0, 103.0 -0.89
B6.PWD-ChrX.2 f 102.0 15.2   7 5.74 0.148 73.0, 120.0 0.63
B6.PWD-ChrX.2 m 101.0 23.3   10 7.36 0.231 73.0, 149.0 -0.19
B6.PWD-ChrX.3 f 92.0 9.59   4 4.8 0.104 83.0, 103.0 0.02
B6.PWD-ChrX.3 m 138.0 11.2   4 5.62 0.0813 125.0, 151.0 1.69
B6.PWD-ChrY f 102.0 5.93   8 2.1 0.0578 94.0, 110.0 0.63
B6.PWD-ChrY m 98.4 22.9   7 8.67 0.233 70.0, 138.0 -0.32
B6.PWD-mt f 82.1 20.7   8 7.31 0.252 47.0, 123.0 -0.59
B6.PWD-mt m 93.4 15.4   8 5.45 0.165 71.0, 111.0 -0.58
C57BL/6J f 64.5 16.2   8 5.73 0.251 41.0, 80.0 -1.68
C57BL/6J m 65.6 15.5   12 4.47 0.236 34.0, 89.0 -1.99
PWD/PhJ f 74.7 18.6   10 5.9 0.25 39.0, 98.0 -1.05
PWD/PhJ m 72.8 14.5   10 4.59 0.199 58.0, 103.0 -1.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 70.25 6.7858 83.5912 56.9088
B6.PWD-Chr1 m 97.0 6.0694 108.9327 85.0673
B6.PWD-Chr10.1 f 105.0833 5.5406 115.9763 94.1903
B6.PWD-Chr10.1 m 89.7 6.0694 101.6327 77.7673
B6.PWD-Chr10.2 f 86.0 7.2544 100.2623 71.7377
B6.PWD-Chr10.2 m 90.3333 11.0812 112.1194 68.5473
B6.PWD-Chr10.3 f 97.875 6.7858 111.2162 84.5338
B6.PWD-Chr10.3 m 131.5 6.7858 144.8412 118.1588
B6.PWD-Chr11.1 f 93.0 11.0812 114.786 71.214
B6.PWD-Chr11.1 m 90.0 11.0812 111.786 68.214
B6.PWD-Chr11.2 f 115.3 6.0694 127.2327 103.3673
B6.PWD-Chr11.2 m 120.2 6.0694 132.1327 108.2673
B6.PWD-Chr11.3 f 98.375 6.7858 111.7162 85.0338
B6.PWD-Chr11.3 m 137.25 6.7858 150.5912 123.9088
B6.PWD-Chr12 f 116.0 6.3977 128.5782 103.4218
B6.PWD-Chr12 m 106.7 6.0694 118.6327 94.7673
B6.PWD-Chr13 f 93.875 6.7858 107.2162 80.5338
B6.PWD-Chr13 m 120.0 6.7858 133.3412 106.6588
B6.PWD-Chr14 f 98.1 6.0694 110.0327 86.1673
B6.PWD-Chr14 m 124.1 6.0694 136.0327 112.1673
B6.PWD-Chr15 f 88.25 6.7858 101.5912 74.9088
B6.PWD-Chr15 m 95.875 6.7858 109.2162 82.5338
B6.PWD-Chr16 f 74.75 6.7858 88.0912 61.4088
B6.PWD-Chr16 m 93.875 6.7858 107.2162 80.5338
B6.PWD-Chr17 f 88.5714 7.2544 102.8337 74.3091
B6.PWD-Chr17 m 102.0 6.7858 115.3412 88.6588
B6.PWD-Chr18 f 69.4 8.5835 86.2754 52.5246
B6.PWD-Chr18 m 109.6667 6.3977 122.2448 97.0885
B6.PWD-Chr19 f 95.75 6.7858 109.0912 82.4088
B6.PWD-Chr19 m 113.875 6.7858 127.2162 100.5338
B6.PWD-Chr2 f 79.2857 7.2544 93.548 65.0234
B6.PWD-Chr2 m 102.7 6.0694 114.6327 90.7673
B6.PWD-Chr3 f 71.75 6.7858 85.0912 58.4088
B6.PWD-Chr3 m 83.6667 6.3977 96.2448 71.0885
B6.PWD-Chr5 f 97.1111 6.3977 109.6893 84.5329
B6.PWD-Chr5 m 136.5455 5.787 147.9228 125.1681
B6.PWD-Chr6 f 80.3333 6.3977 92.9115 67.7552
B6.PWD-Chr6 m 85.625 6.7858 98.9662 72.2838
B6.PWD-Chr8 f 139.3333 11.0812 161.1194 117.5473
B6.PWD-Chr8 m 132.4 8.5835 149.2754 115.5246
B6.PWD-Chr9 f 94.1111 6.3977 106.6893 81.5329
B6.PWD-Chr9 m 111.5 6.7858 124.8412 98.1588
B6.PWD-ChrX.1 f 99.25 6.7858 112.5912 85.9088
B6.PWD-ChrX.1 m 87.25 6.7858 100.5912 73.9088
B6.PWD-ChrX.2 f 102.4286 7.2544 116.6909 88.1663
B6.PWD-ChrX.2 m 100.9 6.0694 112.8327 88.9673
B6.PWD-ChrX.3 f 92.0 9.5966 110.8673 73.1327
B6.PWD-ChrX.3 m 138.25 9.5966 157.1173 119.3827
B6.PWD-ChrY f 102.5 6.7858 115.8412 89.1588
B6.PWD-ChrY m 98.4286 7.2544 112.6909 84.1663
B6.PWD-mt f 82.125 6.7858 95.4662 68.7838
B6.PWD-mt m 93.375 6.7858 106.7162 80.0338
C57BL/6J f 64.5 6.7858 77.8412 51.1588
C57BL/6J m 65.5833 5.5406 76.4763 54.6903
PWD/PhJ f 74.7 6.0694 86.6327 62.7673
PWD/PhJ m 72.8 6.0694 84.7327 60.8673


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 83.625 4.5521 92.5745 74.6755
B6.PWD-Chr10.1 both 97.3917 4.109 105.4701 89.3132
B6.PWD-Chr10.2 both 88.1667 6.6223 101.1863 75.147
B6.PWD-Chr10.3 both 114.6875 4.7983 124.1211 105.2539
B6.PWD-Chr11.1 both 91.5 7.8356 106.905 76.095
B6.PWD-Chr11.2 both 117.75 4.2917 126.1877 109.3123
B6.PWD-Chr11.3 both 117.8125 4.7983 127.2461 108.3789
B6.PWD-Chr12 both 111.35 4.4093 120.0189 102.6811
B6.PWD-Chr13 both 106.9375 4.7983 116.3711 97.5039
B6.PWD-Chr14 both 111.1 4.2917 119.5377 102.6623
B6.PWD-Chr15 both 92.0625 4.7983 101.4961 82.6289
B6.PWD-Chr16 both 84.3125 4.7983 93.7461 74.8789
B6.PWD-Chr17 both 95.2857 4.9667 105.0504 85.521
B6.PWD-Chr18 both 89.5333 5.3527 100.057 79.0097
B6.PWD-Chr19 both 104.8125 4.7983 114.2461 95.3789
B6.PWD-Chr2 both 90.9929 4.7293 100.2907 81.695
B6.PWD-Chr3 both 77.7083 4.6631 86.8762 68.5405
B6.PWD-Chr5 both 116.8283 4.3134 125.3085 108.3481
B6.PWD-Chr6 both 82.9792 4.6631 92.147 73.8113
B6.PWD-Chr8 both 135.8667 7.0084 149.6454 122.088
B6.PWD-Chr9 both 102.8056 4.6631 111.9734 93.6377
B6.PWD-ChrX.1 both 93.25 4.7983 102.6836 83.8164
B6.PWD-ChrX.2 both 101.6643 4.7293 110.9622 92.3664
B6.PWD-ChrX.3 both 115.125 6.7858 128.4662 101.7838
B6.PWD-ChrY both 100.4643 4.9667 110.229 90.6996
B6.PWD-mt both 87.75 4.7983 97.1836 78.3164
C57BL/6J both 65.0417 4.3802 73.6533 56.43
PWD/PhJ both 73.75 4.2917 82.1877 65.3123




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA