Project measure / variable:   Svenson3   cHGB

ID, description, units MPD:27318   cHGB   calculated hemoglobin (HGB)   [g/dL]  
Data set, strains Svenson3   B6.PWD consomic w/par   27 strains     sex: both     age: 7wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Svenson3 - calculated hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested27 strains26 strains
Mean of the strain means14.6   g/dL 14.4   g/dL
Median of the strain means14.5   g/dL 14.4   g/dL
SD of the strain means± 0.818 ± 0.778
Coefficient of variation (CV)0.0559 0.0539
Min–max range of strain means13.3   –   16.0   g/dL 13.1   –   16.6   g/dL
Mean sample size per strain7.8   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.6119 6.6119 15.1154 0.0001
strain 25 205.1362 8.2054 18.7585 < 0.0001
sex:strain 25 21.9589 0.8784 2.008 0.0033
Residuals 360 157.4731 0.4374


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 14.4 0.655   8 0.231 0.0453 13.1, 15.2 -0.3
B6.PWD-Chr1 m 14.4 0.758   10 0.24 0.0526 13.8, 15.9 -0.02
B6.PWD-Chr10.1 f 16.0 0.589   12 0.17 0.0369 15.3, 17.5 1.65
B6.PWD-Chr10.1 m 14.2 1.87   6 0.764 0.131 10.5, 15.5 -0.28
B6.PWD-Chr10.2 f 15.7 0.153   3 0.0882 0.00975 15.5, 15.8 1.29
B6.PWD-Chr10.3 f 14.7 0.389   10 0.123 0.0264 14.2, 15.4 0.06
B6.PWD-Chr10.3 m 14.9 0.623   8 0.22 0.0417 14.1, 15.7 0.62
B6.PWD-Chr11.1 f 14.6 0.848   9 0.283 0.058 12.9, 15.8 -0.06
B6.PWD-Chr11.1 m 14.3 0.629   8 0.222 0.044 13.6, 15.5 -0.15
B6.PWD-Chr11.2 f 14.4 0.632   8 0.224 0.0439 13.8, 15.7 -0.3
B6.PWD-Chr11.2 m 13.6 0.323   8 0.114 0.0237 13.1, 14.1 -1.05
B6.PWD-Chr11.3 f 13.3 1.07   8 0.377 0.0803 11.5, 14.6 -1.65
B6.PWD-Chr11.3 m 13.1 0.807   8 0.285 0.0616 12.1, 14.2 -1.7
B6.PWD-Chr12 f 14.2 0.562   8 0.199 0.0395 13.7, 15.0 -0.55
B6.PWD-Chr12 m 14.3 0.795   8 0.281 0.0554 13.1, 15.3 -0.15
B6.PWD-Chr13 f 14.5 0.316   8 0.112 0.0219 14.0, 14.9 -0.18
B6.PWD-Chr13 m 14.4 0.608   9 0.203 0.0421 13.4, 15.4 -0.02
B6.PWD-Chr14 f 13.3 0.385   8 0.136 0.029 12.9, 14.0 -1.65
B6.PWD-Chr14 m 13.6 0.782   8 0.276 0.0577 12.0, 14.2 -1.05
B6.PWD-Chr15 f 14.5 0.656   8 0.232 0.0453 13.7, 15.3 -0.18
B6.PWD-Chr15 m 14.7 0.705   8 0.249 0.048 14.0, 15.7 0.36
B6.PWD-Chr16 f 13.7 0.972   8 0.344 0.071 12.5, 15.3 -1.16
B6.PWD-Chr16 m 13.8 0.378   8 0.134 0.0274 13.3, 14.4 -0.8
B6.PWD-Chr17 f 15.5 0.578   8 0.204 0.0373 14.8, 16.2 1.04
B6.PWD-Chr17 m 15.2 0.595   8 0.21 0.0393 13.9, 15.9 1.0
B6.PWD-Chr18 f 14.7 0.39   5 0.174 0.0266 14.2, 15.2 0.06
B6.PWD-Chr18 m 14.4 0.48   9 0.16 0.0334 13.5, 14.9 -0.02
B6.PWD-Chr19 f 13.9 0.334   7 0.126 0.024 13.3, 14.3 -0.91
B6.PWD-Chr19 m 13.6 0.445   8 0.157 0.0327 12.9, 14.2 -1.05
B6.PWD-Chr2 f 13.6 0.539   9 0.18 0.0396 12.6, 14.2 -1.28
B6.PWD-Chr2 m 13.7 0.765   10 0.242 0.0557 12.8, 15.0 -0.92
B6.PWD-Chr3 f 14.4 0.423   8 0.15 0.0295 13.8, 15.1 -0.3
B6.PWD-Chr3 m 14.1 0.325   8 0.115 0.023 13.5, 14.5 -0.41
B6.PWD-Chr5 f 15.7 0.678   8 0.24 0.0431 15.0, 16.7 1.29
B6.PWD-Chr5 m 15.0 1.21   8 0.426 0.0804 12.5, 15.9 0.75
B6.PWD-Chr6 f 13.9 0.43   10 0.136 0.0308 13.3, 14.7 -0.91
B6.PWD-Chr6 m 14.2 0.561   8 0.198 0.0396 13.0, 14.8 -0.28
B6.PWD-Chr9 f 15.1 0.484   8 0.171 0.0322 14.5, 15.9 0.55
B6.PWD-Chr9 m 14.2 0.733   8 0.259 0.0518 12.5, 14.7 -0.28
B6.PWD-ChrX.1 f 15.2 0.544   8 0.192 0.0358 14.2, 16.1 0.67
B6.PWD-ChrX.1 m 15.0 1.08   8 0.381 0.0719 12.6, 16.0 0.75
B6.PWD-ChrX.2 f 15.4 0.954   3 0.551 0.0619 14.8, 16.5 0.92
B6.PWD-ChrX.2 m 14.8 0.724   7 0.274 0.049 14.0, 15.9 0.49
B6.PWD-ChrX.3 f 14.1 0.495   9 0.165 0.035 13.5, 14.9 -0.67
B6.PWD-ChrX.3 m 14.4 0.514   8 0.182 0.0357 13.5, 14.9 -0.02
B6.PWD-ChrY f 13.8 0.486   7 0.184 0.0353 13.0, 14.4 -1.04
B6.PWD-ChrY m 13.4 0.393   8 0.139 0.0292 12.9, 13.9 -1.31
B6.PWD-mt f 15.1 0.323   8 0.114 0.0214 14.7, 15.6 0.55
B6.PWD-mt m 15.1 0.554   8 0.196 0.0367 14.4, 16.3 0.88
C57BL/6J f 15.8 0.632   6 0.258 0.04 15.0, 16.9 1.41
C57BL/6J m 15.9 0.418   5 0.187 0.0263 15.5, 16.4 1.9
PWD/PhJ f 16.0 0.267   9 0.0889 0.0167 15.7, 16.5 1.65
PWD/PhJ m 16.6 0.374   4 0.187 0.0225 16.1, 17.0 2.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 14.4375 0.2338 14.8974 13.9776
B6.PWD-Chr1 m 14.42 0.2091 14.8313 14.0087
B6.PWD-Chr10.1 f 15.95 0.1909 16.3255 15.5745
B6.PWD-Chr10.1 m 14.25 0.27 14.781 13.719
B6.PWD-Chr10.3 f 14.74 0.2091 15.1513 14.3287
B6.PWD-Chr10.3 m 14.95 0.2338 15.4099 14.4901
B6.PWD-Chr11.1 f 14.6222 0.2205 15.0558 14.1887
B6.PWD-Chr11.1 m 14.2875 0.2338 14.7474 13.8276
B6.PWD-Chr11.2 f 14.4 0.2338 14.8599 13.9401
B6.PWD-Chr11.2 m 13.6125 0.2338 14.0724 13.1526
B6.PWD-Chr11.3 f 13.3 0.2338 13.7599 12.8401
B6.PWD-Chr11.3 m 13.1 0.2338 13.5599 12.6401
B6.PWD-Chr12 f 14.2125 0.2338 14.6724 13.7526
B6.PWD-Chr12 m 14.3375 0.2338 14.7974 13.8776
B6.PWD-Chr13 f 14.45 0.2338 14.9099 13.9901
B6.PWD-Chr13 m 14.4222 0.2205 14.8558 13.9887
B6.PWD-Chr14 f 13.3 0.2338 13.7599 12.8401
B6.PWD-Chr14 m 13.55 0.2338 14.0099 13.0901
B6.PWD-Chr15 f 14.475 0.2338 14.9349 14.0151
B6.PWD-Chr15 m 14.7 0.2338 15.1599 14.2401
B6.PWD-Chr16 f 13.6875 0.2338 14.1474 13.2276
B6.PWD-Chr16 m 13.8 0.2338 14.2599 13.3401
B6.PWD-Chr17 f 15.475 0.2338 15.9349 15.0151
B6.PWD-Chr17 m 15.15 0.2338 15.6099 14.6901
B6.PWD-Chr18 f 14.68 0.2958 15.2617 14.0983
B6.PWD-Chr18 m 14.3667 0.2205 14.8002 13.9331
B6.PWD-Chr19 f 13.8857 0.25 14.3773 13.3941
B6.PWD-Chr19 m 13.6125 0.2338 14.0724 13.1526
B6.PWD-Chr2 f 13.6 0.2205 14.0336 13.1664
B6.PWD-Chr2 m 13.73 0.2091 14.1413 13.3187
B6.PWD-Chr3 f 14.375 0.2338 14.8349 13.9151
B6.PWD-Chr3 m 14.1375 0.2338 14.5974 13.6776
B6.PWD-Chr5 f 15.7375 0.2338 16.1974 15.2776
B6.PWD-Chr5 m 15.0 0.2338 15.4599 14.5401
B6.PWD-Chr6 f 13.93 0.2091 14.3413 13.5187
B6.PWD-Chr6 m 14.15 0.2338 14.6099 13.6901
B6.PWD-Chr9 f 15.05 0.2338 15.5099 14.5901
B6.PWD-Chr9 m 14.15 0.2338 14.6099 13.6901
B6.PWD-ChrX.1 f 15.225 0.2338 15.6849 14.7651
B6.PWD-ChrX.1 m 14.975 0.2338 15.4349 14.5151
B6.PWD-ChrX.2 f 15.4 0.3818 16.1509 14.6491
B6.PWD-ChrX.2 m 14.7857 0.25 15.2773 14.2941
B6.PWD-ChrX.3 f 14.1444 0.2205 14.578 13.7109
B6.PWD-ChrX.3 m 14.4125 0.2338 14.8724 13.9526
B6.PWD-ChrY f 13.8 0.25 14.2916 13.3084
B6.PWD-ChrY m 13.4375 0.2338 13.8974 12.9776
B6.PWD-mt f 15.1125 0.2338 15.5724 14.6526
B6.PWD-mt m 15.1125 0.2338 15.5724 14.6526
C57BL/6J f 15.8 0.27 16.331 15.269
C57BL/6J m 15.9 0.2958 16.4817 15.3183
PWD/PhJ f 15.9889 0.2205 16.4224 15.5553
PWD/PhJ m 16.6 0.3307 17.2503 15.9497


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 14.4288 0.1569 14.7372 14.1203
B6.PWD-Chr10.1 both 15.1 0.1653 15.4252 14.7748
B6.PWD-Chr10.3 both 14.845 0.1569 15.1535 14.5365
B6.PWD-Chr11.1 both 14.4549 0.1607 14.7709 14.1389
B6.PWD-Chr11.2 both 14.0063 0.1653 14.3314 13.6811
B6.PWD-Chr11.3 both 13.2 0.1653 13.5252 12.8748
B6.PWD-Chr12 both 14.275 0.1653 14.6002 13.9498
B6.PWD-Chr13 both 14.4361 0.1607 14.7521 14.1201
B6.PWD-Chr14 both 13.425 0.1653 13.7502 13.0998
B6.PWD-Chr15 both 14.5875 0.1653 14.9127 14.2623
B6.PWD-Chr16 both 13.7437 0.1653 14.0689 13.4186
B6.PWD-Chr17 both 15.3125 0.1653 15.6377 14.9873
B6.PWD-Chr18 both 14.5233 0.1845 14.8861 14.1606
B6.PWD-Chr19 both 13.7491 0.1711 14.0857 13.4125
B6.PWD-Chr2 both 13.665 0.1519 13.9638 13.3662
B6.PWD-Chr3 both 14.2563 0.1653 14.5814 13.9311
B6.PWD-Chr5 both 15.3688 0.1653 15.6939 15.0436
B6.PWD-Chr6 both 14.04 0.1569 14.3485 13.7315
B6.PWD-Chr9 both 14.6 0.1653 14.9252 14.2748
B6.PWD-ChrX.1 both 15.1 0.1653 15.4252 14.7748
B6.PWD-ChrX.2 both 15.0929 0.2282 15.5416 14.6441
B6.PWD-ChrX.3 both 14.2785 0.1607 14.5945 13.9625
B6.PWD-ChrY both 13.6188 0.1711 13.9553 13.2822
B6.PWD-mt both 15.1125 0.1653 15.4377 14.7873
C57BL/6J both 15.85 0.2002 16.2438 15.4562
PWD/PhJ both 16.2944 0.1987 16.6852 15.9036




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA