Project measure / variable:   Eumorphia2   BMC_12wk

ID, description, units MPD:25905   BMC_12wk   bone mineral content (BMC)   [g]  at age 12wks  
Data set, strains Eumorphia2   inbred   5 strains     sex: both
Procedure DXA
Ontology mappings

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  STRAIN COMPARISON PLOT
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Eumorphia2 - bone mineral content (BMC) at age 12wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains5 strains
Mean of the strain means0.450   g 0.507   g
Median of the strain means0.481   g 0.451   g
SD of the strain means± 0.0483 ± 0.170
Coefficient of variation (CV)0.108 0.336
Min–max range of strain means0.390   –   0.488   g 0.397   –   0.804   g
Mean sample size per strain11.0   mice 10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1925 0.1925 24.375 < 0.0001
strain 4 1.0317 0.2579 32.6663 < 0.0001
sex:strain 4 0.6083 0.1521 19.2605 < 0.0001
Residuals 99 0.7817 0.0079


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPas f 0.488 0.0245   10 0.00776 0.0503 0.445, 0.525 0.79
129S2/SvPas m 0.483 0.025   10 0.00791 0.0518 0.446, 0.518 -0.14
BALB/cJ f 0.404 0.0294   10 0.00928 0.0727 0.332, 0.436 -0.94
BALB/cJ m 0.397 0.024   10 0.00758 0.0603 0.375, 0.449 -0.65
C3HeB/FeJ f 0.485 0.0244   10 0.00771 0.0502 0.447, 0.516 0.73
C3HeB/FeJ m 0.451 0.0108   10 0.00343 0.024 0.434, 0.467 -0.33
C57BL/6J f 0.39 0.0194   10 0.00614 0.0498 0.362, 0.425 -1.23
C57BL/6J m 0.399 0.0187   9 0.00624 0.047 0.38, 0.436 -0.63
C57BL/6N f 0.481 0.101   15 0.0262 0.211 0.323, 0.604 0.65
C57BL/6N m 0.804 0.207   15 0.0535 0.258 0.486, 1.17 1.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas f 0.4876 0.0281 0.5434 0.4318
129S2/SvPas m 0.4829 0.0281 0.5387 0.4271
BALB/cJ f 0.4039 0.0281 0.4597 0.3481
BALB/cJ m 0.3974 0.0281 0.4532 0.3416
C3HeB/FeJ f 0.4854 0.0281 0.5412 0.4296
C3HeB/FeJ m 0.4511 0.0281 0.5069 0.3953
C57BL/6J f 0.3903 0.0281 0.4461 0.3345
C57BL/6J m 0.3987 0.0296 0.4574 0.3399
C57BL/6N f 0.4807 0.0229 0.5262 0.4351
C57BL/6N m 0.8044 0.0229 0.8499 0.7589


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas both 0.4852 0.0199 0.5247 0.4458
BALB/cJ both 0.4007 0.0199 0.4401 0.3612
C3HeB/FeJ both 0.4682 0.0199 0.5077 0.4288
C57BL/6J both 0.3945 0.0204 0.435 0.354
C57BL/6N both 0.6425 0.0162 0.6747 0.6103




GWAS analysis not available: SNP data is not available for enough strains (at least 4)