Project measure / variable:   Yuan3   TBIL_M06

ID, description, units MPD:24466   TBIL_M06   bilirubin (serum TBIL)   [µmol/L]  at age 6mo  
Data set, strains Yuan3   inbred   30 strains     sex: both     age: 26wks
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  STRAIN COMPARISON PLOT
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Yuan3 - bilirubin (serum TBIL) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains25 strains
Mean of the strain means0.399   µmol/L 0.407   µmol/L
Median of the strain means0.396   µmol/L 0.404   µmol/L
SD of the strain means± 0.0678 ± 0.0923
Coefficient of variation (CV)0.170 0.227
Min–max range of strain means0.195   –   0.565   µmol/L 0.167   –   0.609   µmol/L
Mean sample size per strain7.9   mice 7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0153 0.0153 1.5466 0.2145
strain 22 1.2532 0.057 5.767 < 0.0001
sex:strain 22 0.7715 0.0351 3.5505 < 0.0001
Residuals 320 3.1608 0.0099


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.365 0.0657   6 0.0268 0.18 0.26, 0.45 -0.5
129S1/SvImJ m 0.376 0.0695   8 0.0246 0.185 0.26, 0.47 -0.34
A/J f 0.399 0.0873   16 0.0218 0.219 0.19, 0.55 0.0
A/J m 0.609 0.137   8 0.0483 0.224 0.43, 0.81 2.19
BALB/cByJ f 0.383 0.118   8 0.0417 0.308 0.2, 0.54 -0.24
BALB/cByJ m 0.36 0.0926   8 0.0327 0.257 0.2, 0.51 -0.51
BTBR T+ Itpr3tf/J f 0.445 0.0661   4 0.033 0.148 0.36, 0.52 0.68
BTBR T+ Itpr3tf/J m 0.491 0.0903   8 0.0319 0.184 0.3, 0.59 0.91
BUB/BnJ f 0.38 0.0569   6 0.0232 0.15 0.3, 0.46 -0.28
BUB/BnJ m 0.393 0.116   6 0.0472 0.294 0.31, 0.59 -0.16
C3H/HeJ f 0.38 0.0457   8 0.0161 0.12 0.32, 0.44 -0.28
C3H/HeJ m 0.363 0.11   7 0.0416 0.303 0.21, 0.5 -0.48
C57BL/10J f 0.425 0.045   8 0.0159 0.106 0.35, 0.49 0.38
C57BL/10J m 0.385 0.161   6 0.0659 0.419 0.12, 0.56 -0.24
C57BL/6J f 0.379 0.0838   7 0.0317 0.221 0.25, 0.5 -0.29
C57BL/6J m 0.37 0.0173   3 0.01 0.0468 0.36, 0.39 -0.4
C57BLKS/J f 0.406 0.137   8 0.0483 0.336 0.16, 0.55 0.1
C57BLKS/J m 0.335 0.0807   8 0.0285 0.241 0.25, 0.47 -0.78
C57BR/cdJ m 0.388 0.0814   4 0.0407 0.21 0.29, 0.48 -0.21
C57L/J f 0.414 0.0741   8 0.0262 0.179 0.33, 0.52 0.22
C57L/J m 0.474 0.0684   8 0.0242 0.144 0.38, 0.57 0.72
CAST/EiJ f 0.195 0.193   4 0.0964 0.989 -3.01
CBA/J f 0.368 0.0744   6 0.0304 0.202 0.26, 0.46 -0.46
DBA/2J f 0.379 0.0795   8 0.0281 0.21 0.25, 0.47 -0.29
DBA/2J m 0.536 0.119   16 0.0297 0.222 0.31, 0.74 1.39
FVB/NJ f 0.448 0.0666   14 0.0178 0.149 0.36, 0.56 0.72
FVB/NJ m 0.427 0.0832   9 0.0277 0.195 0.3, 0.54 0.21
KK/HlJ f 0.565 0.157   8 0.0555 0.278 0.29, 0.74 2.45
LP/J f 0.389 0.073   8 0.0258 0.188 0.24, 0.48 -0.15
LP/J m 0.422 0.118   8 0.0418 0.28 0.22, 0.56 0.16
MOLF/EiJ f 0.287 0.14   7 0.0531 0.489 0.09, 0.55 -1.65
MOLF/EiJ m 0.21 0.0723   7 0.0273 0.344 0.13, 0.29 -2.14
MRL/MpJ m 0.47 0.0826   8 0.0292 0.176 0.32, 0.56 0.68
NOD.B10Sn-H2b/J f 0.414 0.1   9 0.0334 0.242 0.21, 0.55 0.22
NOD.B10Sn-H2b/J m 0.388 0.056   6 0.0229 0.144 0.3, 0.46 -0.21
NON/ShiLtJ f 0.362 0.0971   8 0.0343 0.268 0.16, 0.46 -0.54
NON/ShiLtJ m 0.503 0.158   8 0.056 0.315 0.23, 0.74 1.04
NZO/HlLtJ f 0.466 0.132   8 0.0467 0.283 0.18, 0.63 0.99
NZO/HlLtJ m 0.453 0.179   6 0.0731 0.395 0.28, 0.74 0.49
NZW/LacJ f 0.392 0.0865   8 0.0306 0.22 0.27, 0.51 -0.1
P/J f 0.39 0.0968   8 0.0342 0.248 0.28, 0.56 -0.13
P/J m 0.167 0.0634   8 0.0224 0.379 0.07, 0.25 -2.61
PL/J f 0.447 0.0762   11 0.023 0.17 0.35, 0.6 0.71
PL/J m 0.452 0.0651   9 0.0217 0.144 0.33, 0.58 0.48
PWD/PhJ f 0.481 0.139   8 0.049 0.288 0.35, 0.78 1.21
PWD/PhJ m 0.447 0.112   7 0.0423 0.25 0.29, 0.63 0.43
RIIIS/J f 0.404 0.102   7 0.0387 0.253 0.3, 0.54 0.07
RIIIS/J m 0.331 0.14   8 0.0496 0.423 0.16, 0.6 -0.83
SJL/J f 0.493 0.0884   8 0.0313 0.18 0.34, 0.6 1.39
SM/J f 0.305 0.0741   8 0.0262 0.243 0.2, 0.42 -1.39
SM/J m 0.404 0.11   7 0.0414 0.271 0.26, 0.56 -0.04
WSB/EiJ f 0.41 0.0787   8 0.0278 0.192 0.34, 0.58 0.16
WSB/EiJ m 0.43 0.0297   6 0.0121 0.069 0.38, 0.47 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.365 0.0406 0.4448 0.2852
129S1/SvImJ m 0.3762 0.0351 0.4454 0.3071
A/J f 0.3987 0.0248 0.4476 0.3499
A/J m 0.6087 0.0351 0.6779 0.5396
BALB/cByJ f 0.3825 0.0351 0.4516 0.3134
BALB/cByJ m 0.36 0.0351 0.4291 0.2909
BTBR T+ Itpr3tf/J f 0.445 0.0497 0.5428 0.3472
BTBR T+ Itpr3tf/J m 0.4912 0.0351 0.5604 0.4221
BUB/BnJ f 0.38 0.0406 0.4598 0.3002
BUB/BnJ m 0.3933 0.0406 0.4732 0.3135
C3H/HeJ f 0.38 0.0351 0.4491 0.3109
C3H/HeJ m 0.3629 0.0376 0.4368 0.289
C57BL/10J f 0.425 0.0351 0.4941 0.3559
C57BL/10J m 0.385 0.0406 0.4648 0.3052
C57BL/6J f 0.3786 0.0376 0.4525 0.3047
C57BL/6J m 0.37 0.0574 0.4829 0.2571
C57BLKS/J f 0.4062 0.0351 0.4754 0.3371
C57BLKS/J m 0.335 0.0351 0.4041 0.2659
C57L/J f 0.4138 0.0351 0.4829 0.3446
C57L/J m 0.4737 0.0351 0.5429 0.4046
DBA/2J f 0.3787 0.0351 0.4479 0.3096
DBA/2J m 0.5356 0.0248 0.5845 0.4867
FVB/NJ f 0.4479 0.0266 0.5001 0.3956
FVB/NJ m 0.4267 0.0331 0.4918 0.3615
LP/J f 0.3888 0.0351 0.4579 0.3196
LP/J m 0.4225 0.0351 0.4916 0.3534
MOLF/EiJ f 0.2871 0.0376 0.361 0.2132
MOLF/EiJ m 0.21 0.0376 0.2839 0.1361
NOD.B10Sn-H2b/J f 0.4144 0.0331 0.4796 0.3493
NOD.B10Sn-H2b/J m 0.3883 0.0406 0.4682 0.3085
NON/ShiLtJ f 0.3625 0.0351 0.4316 0.2934
NON/ShiLtJ m 0.5025 0.0351 0.5716 0.4334
NZO/HlLtJ f 0.4662 0.0351 0.5354 0.3971
NZO/HlLtJ m 0.4533 0.0406 0.5332 0.3735
P/J f 0.39 0.0351 0.4591 0.3209
P/J m 0.1675 0.0351 0.2366 0.0984
PL/J f 0.4473 0.03 0.5062 0.3883
PL/J m 0.4522 0.0331 0.5174 0.387
PWD/PhJ f 0.4812 0.0351 0.5504 0.4121
PWD/PhJ m 0.4471 0.0376 0.521 0.3732
RIIIS/J f 0.4043 0.0376 0.4782 0.3304
RIIIS/J m 0.3312 0.0351 0.4004 0.2621
SM/J f 0.305 0.0351 0.3741 0.2359
SM/J m 0.4043 0.0376 0.4782 0.3304
WSB/EiJ f 0.41 0.0351 0.4791 0.3409
WSB/EiJ m 0.43 0.0406 0.5098 0.3502


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.3706 0.0268 0.4234 0.3178
A/J both 0.5037 0.0215 0.5461 0.4614
BALB/cByJ both 0.3712 0.0248 0.4201 0.3224
BTBR T+ Itpr3tf/J both 0.4681 0.0304 0.528 0.4083
BUB/BnJ both 0.3867 0.0287 0.4431 0.3302
C3H/HeJ both 0.3714 0.0257 0.422 0.3208
C57BL/10J both 0.405 0.0268 0.4578 0.3522
C57BL/6J both 0.3743 0.0343 0.4418 0.3068
C57BLKS/J both 0.3706 0.0248 0.4195 0.3217
C57L/J both 0.4437 0.0248 0.4926 0.3949
DBA/2J both 0.4572 0.0215 0.4995 0.4149
FVB/NJ both 0.4373 0.0212 0.479 0.3955
LP/J both 0.4056 0.0248 0.4545 0.3567
MOLF/EiJ both 0.2486 0.0266 0.3008 0.1963
NOD.B10Sn-H2b/J both 0.4014 0.0262 0.4529 0.3499
NON/ShiLtJ both 0.4325 0.0248 0.4814 0.3836
NZO/HlLtJ both 0.4598 0.0268 0.5126 0.407
P/J both 0.2788 0.0248 0.3276 0.2299
PL/J both 0.4497 0.0223 0.4937 0.4058
PWD/PhJ both 0.4642 0.0257 0.5148 0.4136
RIIIS/J both 0.3678 0.0257 0.4184 0.3172
SM/J both 0.3546 0.0257 0.4052 0.304
WSB/EiJ both 0.42 0.0268 0.4728 0.3672




  GWAS USING LINEAR MIXED MODELS