Project measure / variable:   Peters4   pctBASO_M12

ID, description, units MPD:24350   pctBASO_M12   basophil differential (BASO; percentage of total WBC)   [%]  at age 12mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
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Peters4 - basophil differential (BASO; percentage of total WBC) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means0.338   % 0.308   %
Median of the strain means0.334   % 0.300   %
SD of the strain means± 0.118 ± 0.110
Coefficient of variation (CV)0.349 0.357
Min–max range of strain means0.125   –   0.550   % 0.112   –   0.533   %
Mean sample size per strain7.8   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1482 0.1482 9.3581 0.0024
strain 29 4.2968 0.1482 9.3543 < 0.0001
sex:strain 29 1.3373 0.0461 2.9113 < 0.0001
Residuals 392 6.209 0.0158


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.3 0.0926   8 0.0327 0.309 0.2, 0.5 -0.32
129S1/SvImJ m 0.286 0.146   7 0.0553 0.512 0.1, 0.5 -0.2
A/J f 0.357 0.19   7 0.0719 0.533 0.2, 0.7 0.16
A/J m 0.333 0.151   6 0.0615 0.452 0.2, 0.5 0.22
BALB/cByJ f 0.514 0.248   7 0.0937 0.482 0.3, 1.0 1.49
BALB/cByJ m 0.5 0.163   7 0.0617 0.327 0.3, 0.8 1.74
BTBR T+ Itpr3tf/J f 0.362 0.0744   8 0.0263 0.205 0.3, 0.5 0.2
BTBR T+ Itpr3tf/J m 0.312 0.0641   8 0.0227 0.205 0.2, 0.4 0.03
BUB/BnJ f 0.357 0.0535   7 0.0202 0.15 0.3, 0.4 0.16
BUB/BnJ m 0.333 0.137   6 0.0558 0.41 0.1, 0.5 0.22
C3H/HeJ f 0.125 0.0463   8 0.0164 0.37 0.1, 0.2 -1.81
C3H/HeJ m 0.112 0.0354   8 0.0125 0.314 0.1, 0.2 -1.78
C57BL/10J f 0.422 0.0972   9 0.0324 0.23 0.2, 0.5 0.71
C57BL/10J m 0.325 0.104   8 0.0366 0.318 0.2, 0.5 0.15
C57BL/6J f 0.186 0.107   7 0.0404 0.576 0.1, 0.4 -1.29
C57BL/6J m 0.3 0.11   6 0.0447 0.365 0.1, 0.4 -0.08
C57BLKS/J f 0.15 0.0535   8 0.0189 0.356 0.1, 0.2 -1.6
C57BLKS/J m 0.212 0.136   8 0.0479 0.638 0.1, 0.5 -0.88
C57BR/cdJ f 0.312 0.0835   8 0.0295 0.267 0.2, 0.4 -0.22
C57BR/cdJ m 0.287 0.125   8 0.0441 0.434 0.1, 0.5 -0.19
C57L/J f 0.312 0.125   8 0.0441 0.399 0.1, 0.5 -0.22
C57L/J m 0.3 0.169   8 0.0598 0.563 0.2, 0.7 -0.08
CAST/EiJ f 0.2 0.0535   8 0.0189 0.267 0.1, 0.3 -1.17
CAST/EiJ m 0.417 0.117   6 0.0477 0.281 0.3, 0.6 0.99
CBA/J f 0.25 0.107   8 0.0378 0.428 0.2, 0.5 -0.75
CBA/J m 0.286 0.069   7 0.0261 0.242 0.2, 0.4 -0.2
DBA/2J f 0.487 0.196   8 0.0693 0.402 0.3, 0.8 1.26
DBA/2J m 0.329 0.0756   7 0.0286 0.23 0.2, 0.4 0.19
FVB/NJ f 0.3 0.12   8 0.0423 0.398 0.1, 0.5 -0.32
FVB/NJ m 0.2 0.151   8 0.0535 0.756 -0.98
KK/HlJ f 0.329 0.111   7 0.0421 0.339 0.2, 0.5 -0.08
KK/HlJ m 0.145 0.0688   11 0.0207 0.473 0.1, 0.3 -1.48
LP/J f 0.425 0.0886   8 0.0313 0.209 0.3, 0.5 0.73
LP/J m 0.457 0.113   7 0.0429 0.248 0.3, 0.6 1.35
MRL/MpJ f 0.45 0.12   8 0.0423 0.266 0.3, 0.7 0.95
MRL/MpJ m 0.512 0.29   8 0.103 0.566 0.1, 1.1 1.85
NOD.B10Sn-H2b/J f 0.525 0.167   8 0.059 0.318 0.3, 0.8 1.58
NOD.B10Sn-H2b/J m 0.487 0.236   8 0.0833 0.483 0.2, 0.9 1.62
NON/ShiLtJ f 0.267 0.112   9 0.0373 0.419 0.2, 0.5 -0.6
NON/ShiLtJ m 0.171 0.0756   7 0.0286 0.441 0.1, 0.3 -1.25
NZO/HlLtJ f 0.5 0.2   6 0.0816 0.4 0.4, 0.9 1.37
NZO/HlLtJ m 0.3 0.158   5 0.0707 0.527 0.1, 0.5 -0.08
NZW/LacJ f 0.338 0.0916   8 0.0324 0.271 0.2, 0.5 0.0
NZW/LacJ m 0.113 0.0354   8 0.0125 0.314 0.1, 0.2 -1.77
P/J f 0.329 0.111   7 0.0421 0.339 0.2, 0.5 -0.08
P/J m 0.533 0.115   3 0.0667 0.217 0.4, 0.6 2.04
PL/J f 0.343 0.0976   7 0.0369 0.285 0.2, 0.5 0.04
PL/J m 0.3 0.12   8 0.0423 0.398 0.1, 0.5 -0.08
PWD/PhJ f 0.212 0.0991   8 0.035 0.466 0.1, 0.4 -1.07
PWD/PhJ m 0.288 0.113   8 0.0398 0.392 0.2, 0.5 -0.19
RIIIS/J f 0.138 0.0518   8 0.0183 0.376 0.1, 0.2 -1.7
RIIIS/J m 0.214 0.09   7 0.034 0.42 0.1, 0.3 -0.86
SJL/J f 0.4 0.0577   7 0.0218 0.144 0.3, 0.5 0.52
SJL/J m 0.3 0.151   8 0.0535 0.504 0.1, 0.5 -0.08
SM/J f 0.55 0.169   8 0.0598 0.307 0.3, 0.8 1.79
SM/J m 0.287 0.0835   8 0.0295 0.29 0.2, 0.4 -0.19
SWR/J f 0.443 0.113   7 0.0429 0.256 0.3, 0.6 0.89
SWR/J m 0.3 0.0926   8 0.0327 0.309 0.2, 0.4 -0.08
WSB/EiJ f 0.267 0.0707   9 0.0236 0.265 0.2, 0.4 -0.6
WSB/EiJ m 0.312 0.164   8 0.0581 0.525 0.1, 0.6 0.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.3 0.0445 0.3875 0.2125
129S1/SvImJ m 0.2857 0.0476 0.3792 0.1922
A/J f 0.3571 0.0476 0.4507 0.2636
A/J m 0.3333 0.0514 0.4343 0.2323
BALB/cByJ f 0.5143 0.0476 0.6078 0.4208
BALB/cByJ m 0.5 0.0476 0.5935 0.4065
BTBR T+ Itpr3tf/J f 0.3625 0.0445 0.45 0.275
BTBR T+ Itpr3tf/J m 0.3125 0.0445 0.4 0.225
BUB/BnJ f 0.3571 0.0476 0.4507 0.2636
BUB/BnJ m 0.3333 0.0514 0.4343 0.2323
C3H/HeJ f 0.125 0.0445 0.2125 0.0375
C3H/HeJ m 0.1125 0.0445 0.2 0.025
C57BL/10J f 0.4222 0.042 0.5047 0.3397
C57BL/10J m 0.325 0.0445 0.4125 0.2375
C57BL/6J f 0.1857 0.0476 0.2792 0.0922
C57BL/6J m 0.3 0.0514 0.401 0.199
C57BLKS/J f 0.15 0.0445 0.2375 0.0625
C57BLKS/J m 0.2125 0.0445 0.3 0.125
C57BR/cdJ f 0.3125 0.0445 0.4 0.225
C57BR/cdJ m 0.2875 0.0445 0.375 0.2
C57L/J f 0.3125 0.0445 0.4 0.225
C57L/J m 0.3 0.0445 0.3875 0.2125
CAST/EiJ f 0.2 0.0445 0.2875 0.1125
CAST/EiJ m 0.4167 0.0514 0.5177 0.3157
CBA/J f 0.25 0.0445 0.3375 0.1625
CBA/J m 0.2857 0.0476 0.3792 0.1922
DBA/2J f 0.4875 0.0445 0.575 0.4
DBA/2J m 0.3286 0.0476 0.4221 0.2351
FVB/NJ f 0.3 0.0445 0.3875 0.2125
FVB/NJ m 0.2 0.0445 0.2875 0.1125
KK/HlJ f 0.3286 0.0476 0.4221 0.2351
KK/HlJ m 0.1455 0.0379 0.2201 0.0709
LP/J f 0.425 0.0445 0.5125 0.3375
LP/J m 0.4571 0.0476 0.5507 0.3636
MRL/MpJ f 0.45 0.0445 0.5375 0.3625
MRL/MpJ m 0.5125 0.0445 0.6 0.425
NOD.B10Sn-H2b/J f 0.525 0.0445 0.6125 0.4375
NOD.B10Sn-H2b/J m 0.4875 0.0445 0.575 0.4
NON/ShiLtJ f 0.2667 0.042 0.3491 0.1842
NON/ShiLtJ m 0.1714 0.0476 0.2649 0.0779
NZO/HlLtJ f 0.5 0.0514 0.601 0.399
NZO/HlLtJ m 0.3 0.0563 0.4107 0.1893
NZW/LacJ f 0.3375 0.0445 0.425 0.25
NZW/LacJ m 0.1125 0.0445 0.2 0.025
P/J f 0.3286 0.0476 0.4221 0.2351
P/J m 0.5333 0.0727 0.6762 0.3905
PL/J f 0.3429 0.0476 0.4364 0.2493
PL/J m 0.3 0.0445 0.3875 0.2125
PWD/PhJ f 0.2125 0.0445 0.3 0.125
PWD/PhJ m 0.2875 0.0445 0.375 0.2
RIIIS/J f 0.1375 0.0445 0.225 0.05
RIIIS/J m 0.2143 0.0476 0.3078 0.1208
SJL/J f 0.4 0.0476 0.4935 0.3065
SJL/J m 0.3 0.0445 0.3875 0.2125
SM/J f 0.55 0.0445 0.6375 0.4625
SM/J m 0.2875 0.0445 0.375 0.2
SWR/J f 0.4429 0.0476 0.5364 0.3493
SWR/J m 0.3 0.0445 0.3875 0.2125
WSB/EiJ f 0.2667 0.042 0.3491 0.1842
WSB/EiJ m 0.3125 0.0445 0.4 0.225


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.2929 0.0326 0.3569 0.2288
A/J both 0.3452 0.035 0.4141 0.2764
BALB/cByJ both 0.5071 0.0336 0.5733 0.441
BTBR T+ Itpr3tf/J both 0.3375 0.0315 0.3994 0.2756
BUB/BnJ both 0.3452 0.035 0.4141 0.2764
C3H/HeJ both 0.1187 0.0315 0.1806 0.0569
C57BL/10J both 0.3736 0.0306 0.4337 0.3135
C57BL/6J both 0.2429 0.035 0.3117 0.174
C57BLKS/J both 0.1812 0.0315 0.2431 0.1194
C57BR/cdJ both 0.3 0.0315 0.3619 0.2381
C57L/J both 0.3062 0.0315 0.3681 0.2444
CAST/EiJ both 0.3083 0.034 0.3751 0.2415
CBA/J both 0.2679 0.0326 0.3319 0.2038
DBA/2J both 0.408 0.0326 0.4721 0.344
FVB/NJ both 0.25 0.0315 0.3119 0.1881
KK/HlJ both 0.237 0.0304 0.2968 0.1772
LP/J both 0.4411 0.0326 0.5051 0.377
MRL/MpJ both 0.4812 0.0315 0.5431 0.4194
NOD.B10Sn-H2b/J both 0.5062 0.0315 0.5681 0.4444
NON/ShiLtJ both 0.219 0.0317 0.2814 0.1567
NZO/HlLtJ both 0.4 0.0381 0.4749 0.3251
NZW/LacJ both 0.225 0.0315 0.2869 0.1631
P/J both 0.431 0.0434 0.5163 0.3456
PL/J both 0.3214 0.0326 0.3855 0.2574
PWD/PhJ both 0.25 0.0315 0.3119 0.1881
RIIIS/J both 0.1759 0.0326 0.2399 0.1119
SJL/J both 0.35 0.0326 0.414 0.286
SM/J both 0.4187 0.0315 0.4806 0.3569
SWR/J both 0.3714 0.0326 0.4355 0.3074
WSB/EiJ both 0.2896 0.0306 0.3497 0.2295




  GWAS USING LINEAR MIXED MODELS