Project measure / variable:   Jaxpheno5   bw08

ID, description, units MPD:23006   bw08   body weight   [g]  at age 8 wks  
Data set, strains Jaxpheno5   inbred   10 strains     sex: both     age: 8wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Jaxpheno5 - body weight at age 8 wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means19.8   g 24.6   g
Median of the strain means19.7   g 24.3   g
SD of the strain means± 1.28 ± 1.74
Coefficient of variation (CV)0.0643 0.0705
Min–max range of strain means18.1   –   22.6   g 22.6   –   28.6   g
Mean sample size per strain91.2   mice 93.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4286.6706 4286.6706 1930.9504 < 0.0001
strain 6 435.1816 72.5303 32.6716 < 0.0001
sex:strain 6 74.7702 12.4617 5.6134 < 0.0001
Residuals 709 1573.9656 2.22


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 19.4 1.4   158 0.111 0.072 -0.34
A/J m 22.9 1.9   178 0.142 0.083 -0.99
B6D2F1/J f 20.1 1.6   31 0.287 0.0794 16.4, 23.3 0.2
B6D2F1/J m 25.0 1.35   28 0.256 0.0541 22.8, 29.0 0.22
B6.SJL-Ptprca Pepcb/BoyJ f 19.5 1.3   118 0.12 0.067 -0.27
B6.SJL-Ptprca Pepcb/BoyJ m 24.7 1.7   116 0.158 0.069 0.05
BALB/cByJ f 19.8 1.37   58 0.18 0.0692 17.0, 23.4 -0.03
BALB/cByJ m 23.9 1.32   59 0.171 0.055 21.4, 26.9 -0.41
C57BL/6J f 18.3 1.38   110 0.132 0.0756 14.8, 21.9 -1.21
C57BL/6J m 23.7 1.47   105 0.144 0.062 20.0, 29.6 -0.53
CBA/J f 19.6 1.61   56 0.216 0.0823 15.3, 23.1 -0.19
CBA/J m 23.7 1.44   66 0.177 0.0607 20.0, 27.0 -0.53
DBA/2J f 18.1 1.47   30 0.268 0.0812 13.2, 20.6 -1.36
DBA/2J m 22.6 1.78   30 0.325 0.0786 17.4, 26.3 -1.16
NOD.CB17-Prkdcscid/J f 20.1 1.3   80 0.145 0.065 0.2
NOD.CB17-Prkdcscid/J m 25.3 1.8   77 0.205 0.071 0.39
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 22.6 1.5   197 0.107 0.066 2.16
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ m 28.6 1.8   200 0.127 0.063 2.29
NOD/ShiLtJ f 20.9 1.4   119 0.128 0.067 0.83
NOD/ShiLtJ m 25.8 1.6   118 0.147 0.062 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 20.1064516129 0.2676046452 20.631843973 19.5810592528
B6D2F1/J m 25.0214285714 0.2815758988 25.5742509109 24.4686062319
BALB/cByJ f 19.7706896552 0.195641281 20.1547952238 19.3865840866
BALB/cByJ m 23.9050847458 0.1939762186 24.2859212713 23.5242482202
C57BL/6J f 18.2818181818 0.1420620744 18.5607308611 18.0029055025
C57BL/6J m 23.7333333333 0.1454051689 24.0188095619 23.4478571048
CBA/J f 19.6035714286 0.1991042274 19.9944758536 19.2126670035
CBA/J m 23.6893939394 0.1834013495 24.04946866 23.3293192188
DBA/2J f 18.06 0.2720281621 18.5940771197 17.5259228803
DBA/2J m 22.6433333333 0.2720281621 23.177410453 22.1092562136
NOD.CB17-Prkdcscid/J f 20.105 0.3331650964 20.7591082133 19.4508917867
NOD.CB17-Prkdcscid/J m 25.82 0.3331650964 26.4741082133 25.1658917867
NOD/ShiLtJ f 19.9646153846 0.1848067444 20.3274493389 19.6017814304
NOD/ShiLtJ m 25.5688888889 0.2221100643 26.0049610311 25.1328167467


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 22.5639400922 0.1942274651 22.945269894 22.1826102903
BALB/cByJ both 21.8378872005 0.1377518459 22.1083375411 21.5674368598
C57BL/6J both 21.0075757576 0.1016418911 21.2071308626 20.8080206526
CBA/J both 21.646482684 0.1353500539 21.912217549 21.380747819
DBA/2J both 20.3516666667 0.1923529581 20.7293162197 19.9740171137
NOD.CB17-Prkdcscid/J both 22.9625 0.2355832989 23.4250243532 22.4999756468
NOD/ShiLtJ both 22.7667521368 0.1444700777 23.0503924863 22.4831117872




  GWAS USING LINEAR MIXED MODELS