Project measure / variable:   Jaxpheno4   pct_MONO16

ID, description, units MPD:22935   pct_MONO16   monocyte differential (MONO; percentage of total WBC)   [%]  at age 16wks  
Data set, strains Jaxpheno4   inbred   9 strains     sex: both     age: 16wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Jaxpheno4 - monocyte differential (MONO; percentage of total WBC) at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1.86   % 2.33   %
Median of the strain means1.91   % 2.17   %
SD of the strain means± 0.510 ± 0.825
Coefficient of variation (CV)0.274 0.355
Min–max range of strain means1.05   –   2.47   % 1.25   –   4.30   %
Mean sample size per strain15.7   mice 15.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 19.1003 19.1003 19.1756 < 0.0001
strain 8 84.5158 10.5645 10.6061 < 0.0001
sex:strain 8 22.6567 2.8321 2.8433 0.0047
Residuals 286 284.8765 0.9961


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 1.54 0.65   16 0.162 0.423 0.8, 3.4 -0.63
B6D2F1/J m 2.35 1.37   10 0.432 0.581 0.9, 5.4 0.03
BALB/cByJ f 1.22 0.441   21 0.0963 0.361 0.4, 2.2 -1.26
BALB/cByJ m 1.25 0.284   22 0.0606 0.226 0.8, 1.9 -1.3
C3H/HeJ f 2.41 0.208   10 0.0657 0.0863 2.1, 2.8 1.07
C3H/HeJ m 1.93 0.364   11 0.11 0.189 1.4, 2.6 -0.48
C57BL/6J f 1.05 0.458   35 0.0774 0.438 0.2, 2.2 -1.59
C57BL/6J m 1.96 1.78   30 0.324 0.905 0.4, 8.9 -0.44
CBA/J f 1.95 0.727   22 0.155 0.373 0.5, 3.5 0.17
CBA/J m 2.13 0.774   23 0.161 0.363 0.7, 3.8 -0.24
DBA/2J f 2.34 0.607   11 0.183 0.26 1.3, 3.2 0.94
DBA/2J m 2.32 0.462   11 0.139 0.199 1.7, 3.2 -0.01
FVB/NJ f 1.87 0.919   10 0.291 0.491 1.0, 4.2 0.02
FVB/NJ m 2.17 1.11   11 0.335 0.511 0.7, 4.8 -0.19
NOD.CB17-Prkdcscid/J f 2.47 0.933   10 0.295 0.378 1.4, 4.1 1.19
NOD.CB17-Prkdcscid/J m 4.3 2.26   10 0.714 0.525 1.5, 9.0 2.39
NOD/ShiLtJ f 1.91 1.01   20 0.226 0.529 0.9, 4.7 0.09
NOD/ShiLtJ m 2.53 1.28   21 0.279 0.504 1.1, 6.8 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 1.5375 0.2495 2.0286 1.0464
B6D2F1/J m 2.35 0.3156 2.9712 1.7288
BALB/cByJ f 1.2238 0.2178 1.6525 0.7951
BALB/cByJ m 1.2545 0.2128 1.6734 0.8357
C3H/HeJ f 2.41 0.3156 3.0312 1.7888
C3H/HeJ m 1.9273 0.3009 2.5196 1.335
C57BL/6J f 1.0457 0.1687 1.3778 0.7137
C57BL/6J m 1.9633 0.1822 2.322 1.6047
CBA/J f 1.95 0.2128 2.3688 1.5312
CBA/J m 2.1304 0.2081 2.54 1.7208
DBA/2J f 2.3364 0.3009 2.9287 1.7441
DBA/2J m 2.3182 0.3009 2.9105 1.7259
FVB/NJ f 1.87 0.3156 2.4912 1.2488
FVB/NJ m 2.1727 0.3009 2.765 1.5804
NOD.CB17-Prkdcscid/J f 2.47 0.3156 3.0912 1.8488
NOD.CB17-Prkdcscid/J m 4.3 0.3156 4.9212 3.6788
NOD/ShiLtJ f 1.91 0.2232 2.3493 1.4707
NOD/ShiLtJ m 2.5333 0.2178 2.962 2.1047


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 1.9438 0.2012 2.3397 1.5478
BALB/cByJ both 1.2392 0.1522 1.5388 0.9395
C3H/HeJ both 2.1686 0.218 2.5978 1.7395
C57BL/6J both 1.5045 0.1242 1.7489 1.2601
CBA/J both 2.0402 0.1488 2.3331 1.7473
DBA/2J both 2.3273 0.2128 2.7461 1.9085
FVB/NJ both 2.0214 0.218 2.4505 1.5922
NOD.CB17-Prkdcscid/J both 3.385 0.2232 3.8243 2.9457
NOD/ShiLtJ both 2.2217 0.1559 2.5285 1.9148




  GWAS USING LINEAR MIXED MODELS