Project measure / variable:   Jaxpheno4   pct_MONO8

ID, description, units MPD:22934   pct_MONO8   monocyte differential (MONO; percentage of total WBC)   [%]  at age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - monocyte differential (MONO; percentage of total WBC) at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means1.45   % 1.65   %
Median of the strain means1.38   % 1.39   %
SD of the strain means± 0.744 ± 0.881
Coefficient of variation (CV)0.512 0.533
Min–max range of strain means0.693   –   3.39   % 0.867   –   4.18   %
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.8014 5.8014 13.1588 0.0003
strain 10 172.025 17.2025 39.0187 < 0.0001
sex:strain 10 13.8296 1.383 3.1368 0.0007
Residuals 386 170.1789 0.4409


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 1.31 0.472   10 0.149 0.361 0.6, 2.1 -0.19
B6.129P2-Apoetm1Unc/J m 1.47 0.606   10 0.192 0.412 0.6, 2.6 -0.21
B6D2F1/J f 1.38 0.329   10 0.104 0.239 0.7, 1.8 -0.1
B6D2F1/J m 1.18 0.414   12 0.119 0.352 0.5, 1.8 -0.54
BALB/cByJ f 0.805 0.264   21 0.0575 0.328 0.3, 1.4 -0.87
BALB/cByJ m 1.29 1.07   20 0.238 0.83 0.6, 5.7 -0.41
BALB/cJ f 0.836 0.349   22 0.0743 0.417 0.3, 1.9 -0.83
BALB/cJ m 0.867 0.365   21 0.0797 0.421 0.5, 2.0 -0.89
C3H/HeJ f 1.54 0.399   13 0.111 0.259 0.8, 2.2 0.12
C3H/HeJ m 1.99 0.773   11 0.233 0.388 1.1, 3.9 0.38
C57BL/6J f 0.693 0.302   42 0.0467 0.436 0.1, 1.5 -1.02
C57BL/6J m 1.36 1.29   34 0.222 0.949 0.3, 6.6 -0.33
CBA/J f 1.45 0.343   21 0.0748 0.236 1.0, 2.0 0.0
CBA/J m 1.39 0.54   23 0.113 0.388 0.6, 3.1 -0.3
DBA/2J f 1.6 0.464   23 0.0968 0.29 0.8, 2.5 0.2
DBA/2J m 1.57 0.306   20 0.0684 0.194 1.1, 2.3 -0.09
FVB/NJ f 1.07 0.276   11 0.0832 0.257 0.6, 1.5 -0.51
FVB/NJ m 1.36 0.634   14 0.17 0.465 0.5, 2.7 -0.33
NOD.CB17-Prkdcscid/J f 3.39 1.33   11 0.401 0.392 1.3, 5.9 2.6
NOD.CB17-Prkdcscid/J m 4.18 1.23   12 0.356 0.295 1.8, 5.9 2.87
NOD/ShiLtJ f 1.91 0.553   21 0.121 0.289 1.2, 3.2 0.61
NOD/ShiLtJ m 1.53 0.448   26 0.0879 0.292 1.0, 2.5 -0.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 1.31 0.21 1.7228 0.8972
B6.129P2-Apoetm1Unc/J m 1.47 0.21 1.8828 1.0572
B6D2F1/J f 1.38 0.21 1.7928 0.9672
B6D2F1/J m 1.175 0.1917 1.5519 0.7981
BALB/cByJ f 0.8048 0.1449 1.0896 0.5199
BALB/cByJ m 1.285 0.1485 1.5769 0.9931
BALB/cJ f 0.8364 0.1416 1.1147 0.558
BALB/cJ m 0.8667 0.1449 1.1515 0.5818
C3H/HeJ f 1.5385 0.1842 1.9005 1.1764
C3H/HeJ m 1.9909 0.2002 2.3845 1.5973
C57BL/6J f 0.6929 0.1025 0.8943 0.4914
C57BL/6J m 1.3647 0.1139 1.5886 1.1408
CBA/J f 1.4524 0.1449 1.7373 1.1675
CBA/J m 1.3913 0.1385 1.6635 1.1191
DBA/2J f 1.6 0.1385 1.8722 1.3278
DBA/2J m 1.575 0.1485 1.8669 1.2831
FVB/NJ f 1.0727 0.2002 1.4663 0.6791
FVB/NJ m 1.3643 0.1775 1.7132 1.0154
NOD.CB17-Prkdcscid/J f 3.3909 0.2002 3.7845 2.9973
NOD.CB17-Prkdcscid/J m 4.1833 0.1917 4.5602 3.8065
NOD/ShiLtJ f 1.9143 0.1449 2.1992 1.6294
NOD/ShiLtJ m 1.5346 0.1302 1.7906 1.2786


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 1.39 0.1485 1.6819 1.0981
B6D2F1/J both 1.2775 0.1422 1.557 0.998
BALB/cByJ both 1.0449 0.1037 1.2488 0.8409
BALB/cJ both 0.8515 0.1013 1.0507 0.6524
C3H/HeJ both 1.7647 0.136 2.0321 1.4973
C57BL/6J both 1.0288 0.0766 1.1794 0.8782
CBA/J both 1.4218 0.1002 1.6189 1.2248
DBA/2J both 1.5875 0.1015 1.7871 1.3879
FVB/NJ both 1.2185 0.1338 1.4815 0.9555
NOD.CB17-Prkdcscid/J both 3.7871 0.1386 4.0596 3.5147
NOD/ShiLtJ both 1.7245 0.0974 1.916 1.5329




  GWAS USING LINEAR MIXED MODELS